RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W DIC1Q06143 298 aa2.42□□□□□ -2.02
NIC96YFR002W SGV1P23293 657 aaKnown RBP2.42□□□□□ -2.02
NIC96YFR002W SNC1P31109 117 aa2.42□□□□□ -2.02
NIC96YFR002W ATS1P31386 333 aa2.42□□□□□ -2.02
NIC96YFR002W YHR218WP38899 603 aa2.42□□□□□ -2.02
NIC96YFR002W YMR087WQ04299 284 aa2.42□□□□□ -2.02
NIC96YFR002W OPY2Q06810 360 aa2.42□□□□□ -2.02
NIC96YFR002W PSR1Q07800 427 aa2.42□□□□□ -2.02
NIC96YFR002W RIX7Q07844 837 aaKnown RBP2.42□□□□□ -2.02
NIC96YFR002W PDH1Q12428 516 aaKnown RBP2.42□□□□□ -2.02
NIC96YFR002W DBP8P38719 431 aa2.41□□□□□ -2.02
NIC96YFR002W TMA108P40462 946 aa2.41□□□□□ -2.02
NIC96YFR002W ROK1P45818 564 aaPredicted RBP2.41□□□□□ -2.02
NIC96YFR002W SIP4P46954 829 aa2.41□□□□□ -2.02
NIC96YFR002W SRB7P47822 140 aa2.41□□□□□ -2.02
NIC96YFR002W UPF3P48412 387 aaKnown RBP2.41□□□□□ -2.02
NIC96YFR002W SSK1Q07084 712 aa2.41□□□□□ -2.02
NIC96YFR002W GRC3Q07845 632 aa2.41□□□□□ -2.02
NIC96YFR002W YEH2Q07950 538 aa2.41□□□□□ -2.02
NIC96YFR002W TLG2Q08144 397 aa2.41□□□□□ -2.02
NIC96YFR002W THI20Q08224 551 aa2.41□□□□□ -2.02
NIC96YFR002W PPT2Q12036 173 aa2.41□□□□□ -2.02
NIC96YFR002W ARG81P05085 880 aa2.41□□□□□ -2.02
NIC96YFR002W RPL15AP05748 204 aaKnown RBP2.41□□□□□ -2.02
NIC96YFR002W SAN1P22470 610 aa2.41□□□□□ -2.02
NIC96YFR002W SYN8P31377 255 aa2.41□□□□□ -2.02
NIC96YFR002W MDM31P38880 579 aa2.41□□□□□ -2.02
NIC96YFR002W YJR061WP40355 935 aa2.41□□□□□ -2.02
NIC96YFR002W IKS1P47042 667 aa2.41□□□□□ -2.02
NIC96YFR002W LYS4P49367 693 aaPredicted RBP2.41□□□□□ -2.02
NIC96YFR002W DIA3P52290 468 aa2.41□□□□□ -2.02
NIC96YFR002W ERG26P53199 349 aaKnown RBP2.41□□□□□ -2.02
NIC96YFR002W CPR3P25719 182 aa2.4□□□□□ -2.02
NIC96YFR002W BUD14P27637 709 aa2.4□□□□□ -2.02
NIC96YFR002W RRN3P36070 627 aa2.4□□□□□ -2.02
NIC96YFR002W MUD2P36084 527 aaKnown RBP2.4□□□□□ -2.02
NIC96YFR002W JNM1P36224 373 aa2.4□□□□□ -2.02
NIC96YFR002W ROT2P38138 954 aa2.4□□□□□ -2.02
NIC96YFR002W SDS24P38314 527 aa2.4□□□□□ -2.02
NIC96YFR002W LAG1P38703 411 aa2.4□□□□□ -2.02
NIC96YFR002W DOT5P40553 215 aa2.4□□□□□ -2.02
NIC96YFR002W SAM50P53969 484 aa2.4□□□□□ -2.02
NIC96YFR002W RSM23Q01163 450 aa2.4□□□□□ -2.02
NIC96YFR002W TSR2Q06672 205 aaKnown RBP2.4□□□□□ -2.02
NIC96YFR002W ENT4Q07872 247 aa2.4□□□□□ -2.02
NIC96YFR002W RER1P25560 188 aa2.4□□□□□ -2.03
NIC96YFR002W MTR2P34232 184 aaKnown RBP2.4□□□□□ -2.03
NIC96YFR002W ECM15P35195 104 aa2.4□□□□□ -2.03
NIC96YFR002W AGP2P38090 596 aa2.4□□□□□ -2.03
NIC96YFR002W YBR139WP38109 508 aa2.4□□□□□ -2.03
NIC96YFR002W KAP123P40069 1113 aaKnown RBP2.4□□□□□ -2.03
NIC96YFR002W YDL186WP48568 277 aa2.4□□□□□ -2.03
NIC96YFR002W YPL014WQ02606 381 aa2.4□□□□□ -2.03
NIC96YFR002W TEN1Q07921 160 aa2.4□□□□□ -2.03
NIC96YFR002W LEU9Q12166 604 aaKnown RBP2.4□□□□□ -2.03
NIC96YFR002W RIM15P43565 1770 aa2.39□□□□□ -2.03
NIC96YFR002W CMK1P27466 446 aaKnown RBP2.39□□□□□ -2.03
NIC96YFR002W TOA1P32773 286 aa2.39□□□□□ -2.03
NIC96YFR002W BLI1P35727 113 aa2.39□□□□□ -2.03
NIC96YFR002W RRP3P38712 501 aaKnown RBP2.39□□□□□ -2.03
NIC96YFR002W YTA12P40341 825 aa2.39□□□□□ -2.03
NIC96YFR002W DPH1P40487 425 aaKnown RBP2.39□□□□□ -2.03
NIC96YFR002W YMR160WQ03823 816 aa2.39□□□□□ -2.03
NIC96YFR002W YMR018WQ04364 514 aa2.39□□□□□ -2.03
NIC96YFR002W ECM30Q06673 1274 aa2.39□□□□□ -2.03
NIC96YFR002W VIP1Q06685 1146 aaKnown RBP2.39□□□□□ -2.03
NIC96YFR002W NBP2Q12163 236 aa2.39□□□□□ -2.03
NIC96YFR002W BUG1Q12191 341 aa2.39□□□□□ -2.03
NIC96YFR002W YRF1-3P0CX14 1859 aa2.39□□□□□ -2.03
NIC96YFR002W YRF1-7P0CX15 1859 aa2.39□□□□□ -2.03
NIC96YFR002W YRF1-6P53819 1859 aa2.39□□□□□ -2.03
NIC96YFR002W FIG2P25653 1609 aa2.39□□□□□ -2.03
NIC96YFR002W MET8P15807 274 aa2.39□□□□□ -2.03
NIC96YFR002W AAC3P18238 307 aa2.39□□□□□ -2.03
NIC96YFR002W ADH7P25377 361 aa2.39□□□□□ -2.03
NIC96YFR002W PAH1P32567 862 aa2.39□□□□□ -2.03
NIC96YFR002W SIP2P34164 415 aaKnown RBP2.39□□□□□ -2.03
NIC96YFR002W RPR2P40571 144 aa2.39□□□□□ -2.03
NIC96YFR002W RTT101P47050 842 aa2.39□□□□□ -2.03
NIC96YFR002W COS10P52924 374 aa2.39□□□□□ -2.03
NIC96YFR002W RHO4Q00246 291 aa2.39□□□□□ -2.03
NIC96YFR002W CDC45Q08032 650 aa2.39□□□□□ -2.03
NIC96YFR002W YPL272CQ08984 517 aa2.39□□□□□ -2.03
NIC96YFR002W TY4B-HP0C2J7 1802 aa2.39□□□□□ -2.03
NIC96YFR002W TY4B-JP47024 1803 aa2.39□□□□□ -2.03
NIC96YFR002W GDH1P07262 454 aaKnown RBP2.38□□□□□ -2.03
NIC96YFR002W KGD1P20967 1014 aaKnown RBP2.38□□□□□ -2.03
NIC96YFR002W AGA1P32323 725 aa2.38□□□□□ -2.03
NIC96YFR002W YFL040WP43562 540 aa2.38□□□□□ -2.03
NIC96YFR002W SMM1P53720 384 aaKnown RBP2.38□□□□□ -2.03
NIC96YFR002W BOR1P53838 576 aa2.38□□□□□ -2.03
NIC96YFR002W RSA1Q08932 381 aa2.38□□□□□ -2.03
NIC96YFR002W HOM3P10869 527 aa2.38□□□□□ -2.03
NIC96YFR002W SEC62P21825 274 aa2.38□□□□□ -2.03
NIC96YFR002W VMA16P23968 213 aa2.38□□□□□ -2.03
NIC96YFR002W BUD5P25300 642 aaPredicted RBP2.38□□□□□ -2.03
NIC96YFR002W VPS17P32913 551 aa2.38□□□□□ -2.03
NIC96YFR002W AVT5P38176 459 aa2.38□□□□□ -2.03
NIC96YFR002W RPH1P39956 796 aa2.38□□□□□ -2.03
NIC96YFR002W NOP16P40007 231 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms