RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	ALK1	P43633	760 aa	Known RBP	5.61	□□□□□ -1.51
SNF11	YDR073W	CPR8	P53728	308 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	RSM23	Q01163	450 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	YLR049C	Q12110	428 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	MTR10	Q99189	972 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	RAV1	P47104	1357 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	RTC1	Q08281	1341 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	TAL1	P15019	335 aa	Known RBP	5.6	□□□□□ -1.51
SNF11	YDR073W	ELO2	P25358	347 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	SPC110	P32380	944 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	HIR2	P32480	875 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	PPQ1	P32945	549 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	YHL017W	P38745	532 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	ANS1	P38832	159 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	YDR089W	P38966	869 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	ATG27	P46989	271 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	YGL108C	P53139	140 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	MSC1	Q03104	513 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	THI3	Q07471	609 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	YFH1	Q07540	174 aa		5.6	□□□□□ -1.51
SNF11	YDR073W	DIS3	Q08162	1001 aa	Known RBP	5.6	□□□□□ -1.51
SNF11	YDR073W	GPH1	P06738	902 aa	Known RBP	5.59	□□□□□ -1.51
SNF11	YDR073W	RHO2	P06781	192 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	HCM1	P25364	564 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	MLH1	P38920	769 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	VPS45	P38932	577 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	MIT1	P40002	666 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	VHS2	P40463	436 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	AIM22	P47051	409 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	ECM27	P47144	725 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	YGR126W	P53274	230 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	YNL143C	P53908	130 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	YDL057W	Q07379	328 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	YOL073C	Q08232	322 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	YOR389W	Q08912	624 aa		5.59	□□□□□ -1.51
SNF11	YDR073W	CAR1	P00812	333 aa	Known RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	COR1	P07256	457 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	OM45	P16547	393 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	PRP2	P20095	876 aa	Predicted RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	DEF1	P35732	738 aa	Known RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	EBP2	P36049	427 aa	Known RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	YMC2	P38087	329 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	YGL117W	P53133	265 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	RMD9	P53140	646 aa	Known RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	RBA50	Q04418	439 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	PHO92	Q06390	306 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	CYK3	Q07533	885 aa		5.58	□□□□□ -1.52
SNF11	YDR073W	PFK27	Q12471	397 aa	Predicted RBP	5.58	□□□□□ -1.52
SNF11	YDR073W	YMR084W	A2P2R3	262 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	RPL7A	P05737	244 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	UBA1	P22515	1024 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	FAA1	P30624	700 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	CRM1	P30822	1084 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	SAC1	P32368	623 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	THI80	P35202	319 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	MRPL40	P36534	297 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	MBB1	P39534	108 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	MKT1	P40850	830 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	RPA34	P47006	233 aa	Predicted RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	BPL1	P48445	690 aa	Predicted RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	TOM22	P49334	152 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	YPR003C	P53394	754 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	COP1	P53622	1201 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	PRM1	P53835	661 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	OCA2	P53949	197 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	VTC3	Q02725	835 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	RAD34	Q06665	692 aa		5.57	□□□□□ -1.52
SNF11	YDR073W	RPS10A	Q08745	105 aa	Predicted RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	RPL7B	Q12213	244 aa	Known RBP	5.57	□□□□□ -1.52
SNF11	YDR073W	CHO1	P08456	276 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	KRS1	P15180	591 aa	Known RBP	5.56	□□□□□ -1.52
SNF11	YDR073W	TKL1	P23254	680 aa	Known RBP	5.56	□□□□□ -1.52
SNF11	YDR073W	YJU2	P28320	278 aa	Predicted RBP	5.56	□□□□□ -1.52
SNF11	YDR073W	BEM1	P29366	551 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	NDI1	P32340	513 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	VPS17	P32913	551 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	PXL1	P36166	706 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	VHC1	P38329	1120 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	YHR131C	P38835	850 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	IRC24	P40580	263 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	TDA10	P42938	290 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	MRPL1	Q04599	285 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	YLR455W	Q06188	304 aa		5.56	□□□□□ -1.52
SNF11	YDR073W	SEC3	P33332	1336 aa	Known RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	YMR085W	P0CF18	432 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	PMR1	P13586	950 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	ARO3	P14843	370 aa	Known RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	MSS51	P32335	436 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	RIM1	P32445	135 aa	Known RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	SHP1	P34223	423 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	YER130C	P39959	443 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	ELP2	P42935	788 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	RPS10B	P46784	105 aa	Known RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	ASN1	P49089	572 aa	Known RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	RRP46	P53256	223 aa	Predicted RBP	5.55	□□□□□ -1.52
SNF11	YDR073W	DUG3	P53871	357 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	YMR206W	Q03695	313 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	THP1	Q08231	455 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	CEX1	Q12453	761 aa		5.55	□□□□□ -1.52
SNF11	YDR073W	ILV5	P06168	395 aa	Known RBP	5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms