RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene CDC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC34	YDR054C	BEM1	P29366	551 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	HXT4	P32467	576 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	ALY1	P36117	915 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	IFA38	P38286	347 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	SEO1	P39709	593 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	MRX1	P40050	688 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	PEP8	P40335	379 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	PAN6	P40459	309 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	IST3	P40565	148 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	IMA5	P40884	581 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	TES1	P41903	349 aa	Known RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	IRC5	P43610	853 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	RMD8	P43620	662 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	PAN2	P53010	1115 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	VEL1	P53058	206 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	YGR045C	P53229	120 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	ELA1	P53861	379 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	TOF2	Q02208	771 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	YPL014W	Q02606	381 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	PIR1	Q03178	341 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	SNO4	Q04902	237 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	LDB18	Q07887	179 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	HRK1	Q08732	759 aa	Known RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	HSP33	Q08914	237 aa	Known RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	HSP32	Q08992	237 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	SMF3	Q12078	473 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC34	YDR054C	PEX11	Q12462	236 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	RMD5	Q12508	421 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	YLR149C	Q99296	730 aa		6.1	□□□□□ -1.43
CDC34	YDR054C	GCN4	P03069	281 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	REV1	P12689	985 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	DAL81	P21657	970 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	DCC1	P25559	380 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	GEX1	P25596	615 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	STE13	P33894	931 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	COY1	P34237	679 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	CAB3	P36076	571 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	GEX2	P36173	615 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	MRP21	P38175	177 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	GIC1	P38785	314 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	YDR089W	P38966	869 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	PIK1	P39104	1066 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	LSM5	P40089	93 aa	Known RBP	6.09	□□□□□ -1.43
CDC34	YDR054C	YJL068C	P40363	299 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	PRM2	P40534	656 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	OCA1	P50946	238 aa	Predicted RBP	6.09	□□□□□ -1.43
CDC34	YDR054C	NOP15	P53927	220 aa	Predicted RBP	6.09	□□□□□ -1.43
CDC34	YDR054C	YVH1	Q02256	364 aa	Known RBP	6.09	□□□□□ -1.43
CDC34	YDR054C	YMR102C	Q03177	834 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	APC9	Q12107	265 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	RIB2	Q12362	591 aa	Known RBP	6.09	□□□□□ -1.43
CDC34	YDR054C	SKM1	Q12469	655 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	RGS2	Q99188	309 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	Q0142	Q9ZZW4	58 aa		6.09	□□□□□ -1.43
CDC34	YDR054C	UBR2	Q07963	1872 aa		6.09	□□□□□ -1.44
CDC34	YDR054C	SCH9	P11792	824 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
CDC34	YDR054C	NSP1	P14907	823 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	AMD1	P15274	810 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	OLE1	P21147	510 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	CDC10	P25342	322 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	AEP1	P32493	518 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	PHO89	P38361	574 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	MED6	P38782	295 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	EXO1	P39875	702 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	HEM14	P40012	539 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	CHS6	P40955	746 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	ERG10	P41338	398 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	OYE3	P41816	400 aa	Predicted RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	BUD13	P46947	266 aa	Predicted RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	SOK2	P53438	785 aa	Predicted RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	YNR061C	P53747	219 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	BSC5	P53755	489 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	VAC7	P53950	1165 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	CIK1	Q01649	594 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	PET117	Q02771	107 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	YDR132C	Q03900	495 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	RPN9	Q04062	393 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	RSB1	Q08417	382 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	CHS5	Q12114	671 aa	Known RBP	6.08	□□□□□ -1.44
CDC34	YDR054C	SPE4	Q12455	300 aa		6.08	□□□□□ -1.44
CDC34	YDR054C	STE2	D6VTK4	431 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	ARG3	P05150	338 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	MET17	P06106	444 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	CDC26	P14724	124 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	BET2	P20133	325 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	YSP3	P25036	478 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	HRR25	P29295	494 aa	Known RBP	6.07	□□□□□ -1.44
CDC34	YDR054C	DEP1	P31385	405 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	RPC82	P32349	654 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	ERG3	P32353	365 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	RPN2	P32565	945 aa	Known RBP	6.07	□□□□□ -1.44
CDC34	YDR054C	MDL1	P33310	695 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	YKL097C	P34245	136 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	GND1	P38720	489 aa	Known RBP	6.07	□□□□□ -1.44
CDC34	YDR054C	RGI2	P40188	164 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	EMC4	P53073	190 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	COG1	P53079	417 aa		6.07	□□□□□ -1.44
CDC34	YDR054C	ARE2	P53629	642 aa	Known RBP	6.07	□□□□□ -1.44
CDC34	YDR054C	IPI3	P53877	555 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms