RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C CAF120P53836 1060 aa10.21□□□□□ -0.78
SHM2YLR058C YPL109CQ02981 657 aa10.21□□□□□ -0.78
SHM2YLR058C SPC24Q04477 213 aa10.21□□□□□ -0.78
SHM2YLR058C RAD34Q06665 692 aa10.21□□□□□ -0.78
SHM2YLR058C ATG34Q12292 412 aa10.21□□□□□ -0.78
SHM2YLR058C RRP36Q12481 300 aaPredicted RBP10.21□□□□□ -0.78
SHM2YLR058C COS2P0CX12 379 aa10.2□□□□□ -0.78
SHM2YLR058C COS3P0CX13 379 aa10.2□□□□□ -0.78
SHM2YLR058C GFD2P25370 566 aaKnown RBP10.2□□□□□ -0.78
SHM2YLR058C PTC1P35182 281 aa10.2□□□□□ -0.78
SHM2YLR058C YHR127WP38833 243 aaKnown RBP10.2□□□□□ -0.78
SHM2YLR058C FRT2P39734 528 aa10.2□□□□□ -0.78
SHM2YLR058C GCD10P41814 478 aa10.2□□□□□ -0.78
SHM2YLR058C COS4P43542 379 aa10.2□□□□□ -0.78
SHM2YLR058C MNN10P50108 393 aaKnown RBP10.2□□□□□ -0.78
SHM2YLR058C USE1P53146 245 aa10.2□□□□□ -0.78
SHM2YLR058C YDR338CQ05497 695 aa10.2□□□□□ -0.78
SHM2YLR058C YDL121CQ07541 149 aa10.2□□□□□ -0.78
SHM2YLR058C YEH2Q07950 538 aa10.2□□□□□ -0.78
SHM2YLR058C YPL225WQ08971 146 aaKnown RBP10.2□□□□□ -0.78
SHM2YLR058C SRO7Q12038 1033 aa10.2□□□□□ -0.78
SHM2YLR058C COX3P00420 269 aa10.19□□□□□ -0.78
SHM2YLR058C STE3P06783 470 aa10.19□□□□□ -0.78
SHM2YLR058C PRP6P19735 899 aaPredicted RBP10.19□□□□□ -0.78
SHM2YLR058C DBR1P24309 405 aaKnown RBP10.19□□□□□ -0.78
SHM2YLR058C COX13P32799 129 aa10.19□□□□□ -0.78
SHM2YLR058C PCF11P39081 626 aaPredicted RBP10.19□□□□□ -0.78
SHM2YLR058C SEC27P41811 889 aaKnown RBP10.19□□□□□ -0.78
SHM2YLR058C TY4A-JP47023 414 aa10.19□□□□□ -0.78
SHM2YLR058C YPT32P51996 222 aaKnown RBP10.19□□□□□ -0.78
SHM2YLR058C GTR1Q00582 310 aa10.19□□□□□ -0.78
SHM2YLR058C YET2Q04210 160 aa10.19□□□□□ -0.78
SHM2YLR058C DIA2Q08496 732 aaPredicted RBP10.19□□□□□ -0.78
SHM2YLR058C RTT10Q08924 1013 aa10.19□□□□□ -0.78
SHM2YLR058C RRP42Q12277 265 aaPredicted RBP10.19□□□□□ -0.78
SHM2YLR058C PMR1P13586 950 aa10.18□□□□□ -0.78
SHM2YLR058C PDB1P32473 366 aaKnown RBP10.18□□□□□ -0.78
SHM2YLR058C CBF5P33322 483 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
SHM2YLR058C DEF1P35732 738 aaKnown RBP10.18□□□□□ -0.78
SHM2YLR058C ARN1P38731 627 aa10.18□□□□□ -0.78
SHM2YLR058C ARB1P40024 610 aaKnown RBP10.18□□□□□ -0.78
SHM2YLR058C YJR149WP47177 404 aa10.18□□□□□ -0.78
SHM2YLR058C GCV1P48015 400 aa10.18□□□□□ -0.78
SHM2YLR058C TFB4Q12004 338 aa10.18□□□□□ -0.78
SHM2YLR058C YDR056CQ12025 205 aa10.18□□□□□ -0.78
SHM2YLR058C CUE2P36075 443 aaKnown RBP10.17□□□□□ -0.78
SHM2YLR058C TSC10P38342 320 aa10.17□□□□□ -0.78
SHM2YLR058C DED81P38707 554 aaKnown RBP10.17□□□□□ -0.78
SHM2YLR058C INM1P38710 295 aa10.17□□□□□ -0.78
SHM2YLR058C YHL008CP38750 627 aa10.17□□□□□ -0.78
SHM2YLR058C GIC1P38785 314 aa10.17□□□□□ -0.78
SHM2YLR058C YEN1P40028 759 aa10.17□□□□□ -0.78
SHM2YLR058C YJR030CP47101 745 aa10.17□□□□□ -0.78
SHM2YLR058C MDM34P53083 459 aa10.17□□□□□ -0.78
SHM2YLR058C NNF2P53253 936 aa10.17□□□□□ -0.78
SHM2YLR058C YNL035CP53962 389 aaKnown RBP10.17□□□□□ -0.78
SHM2YLR058C ROT1Q03691 256 aa10.17□□□□□ -0.78
SHM2YLR058C YMR111CQ04461 462 aaPredicted RBP10.17□□□□□ -0.78
SHM2YLR058C OSW1Q08692 278 aa10.17□□□□□ -0.78
SHM2YLR058C SRN2Q99176 213 aa10.17□□□□□ -0.78
SHM2YLR058C RNA1P11745 407 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C SCL1P21243 252 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C MGM101P32787 269 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C RMA1P36001 430 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C YBL029WP38201 376 aa10.16□□□□□ -0.78
SHM2YLR058C YPT35P38815 214 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C YIL108WP40483 696 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C YGL176CP46945 554 aa10.16□□□□□ -0.78
SHM2YLR058C YNL260CP53846 198 aa10.16□□□□□ -0.78
SHM2YLR058C VHS1Q03785 461 aa10.16□□□□□ -0.78
SHM2YLR058C YMR034CQ05131 434 aaPredicted RBP10.16□□□□□ -0.78
SHM2YLR058C YFT2Q06676 274 aa10.16□□□□□ -0.78
SHM2YLR058C CMR1Q12510 522 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C UBP14P38237 781 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C CCT7P42943 550 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C YFR020WP43600 232 aa10.16□□□□□ -0.78
SHM2YLR058C YGR053CP53234 283 aa10.16□□□□□ -0.78
SHM2YLR058C GTB1Q04924 702 aa10.16□□□□□ -0.78
SHM2YLR058C PFA4Q12006 378 aa10.16□□□□□ -0.78
SHM2YLR058C IOC2Q12072 812 aa10.16□□□□□ -0.78
SHM2YLR058C YPL245WQ12179 454 aaKnown RBP10.16□□□□□ -0.78
SHM2YLR058C YPR011CQ12251 326 aa10.16□□□□□ -0.78
SHM2YLR058C RGT2Q12300 763 aa10.16□□□□□ -0.78
SHM2YLR058C HXK2P04807 486 aaKnown RBP10.15□□□□□ -0.79
SHM2YLR058C DGR2P32330 852 aa10.15□□□□□ -0.79
SHM2YLR058C SSE1P32589 693 aaKnown RBP10.15□□□□□ -0.79
SHM2YLR058C MRPL37P36532 105 aa10.15□□□□□ -0.79
SHM2YLR058C COS12P53053 380 aa10.15□□□□□ -0.79
SHM2YLR058C SDH1Q00711 640 aa10.15□□□□□ -0.79
SHM2YLR058C CTK1Q03957 528 aaKnown RBP10.15□□□□□ -0.79
SHM2YLR058C YDR444WQ04093 687 aa10.15□□□□□ -0.79
SHM2YLR058C CDA1Q06702 301 aa10.15□□□□□ -0.79
SHM2YLR058C YPR202WQ08993 238 aa10.15□□□□□ -0.79
SHM2YLR058C SLF1Q12034 447 aaKnown RBP10.15□□□□□ -0.79
SHM2YLR058C ATG29Q12092 213 aa10.15□□□□□ -0.79
SHM2YLR058C MHT1Q12525 324 aa10.15□□□□□ -0.79
SHM2YLR058C HSH49Q99181 213 aaPredicted RBP10.15□□□□□ -0.79
SHM2YLR058C YOL087CQ99247 1116 aa10.15□□□□□ -0.79
SHM2YLR058C NHA1Q99271 985 aa10.15□□□□□ -0.79
SHM2YLR058C HRP1Q99383 534 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 404.2 ms