RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	LSC1	P53598	329 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	CTL1	Q03220	320 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	MCP2	Q06567	569 aa		2.13	□□□□□ -2.07
DOT6	YER088C	BUG1	Q12191	341 aa		2.13	□□□□□ -2.07
DOT6	YER088C	YCK1	P23291	538 aa		2.13	□□□□□ -2.07
DOT6	YER088C	SGV1	P23293	657 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	YUR1	P26725	428 aa		2.13	□□□□□ -2.07
DOT6	YER088C	SEC1	P30619	724 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	PAH1	P32567	862 aa		2.13	□□□□□ -2.07
DOT6	YER088C	PDR3	P33200	976 aa		2.13	□□□□□ -2.07
DOT6	YER088C	KTR3	P38130	404 aa	Predicted RBP	2.13	□□□□□ -2.07
DOT6	YER088C	CCT6	P39079	546 aa		2.13	□□□□□ -2.07
DOT6	YER088C	YER130C	P39959	443 aa		2.13	□□□□□ -2.07
DOT6	YER088C	BUR6	P40096	142 aa		2.13	□□□□□ -2.07
DOT6	YER088C	YIL169C	P40442	995 aa		2.13	□□□□□ -2.07
DOT6	YER088C	LYS14	P40971	790 aa		2.13	□□□□□ -2.07
DOT6	YER088C	APT1	P49435	187 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	YNL181W	P53878	407 aa		2.13	□□□□□ -2.07
DOT6	YER088C	SMA1	Q02651	245 aa		2.13	□□□□□ -2.07
DOT6	YER088C	MSC1	Q03104	513 aa		2.13	□□□□□ -2.07
DOT6	YER088C	NGL3	Q03210	505 aa		2.13	□□□□□ -2.07
DOT6	YER088C	YDL218W	Q07629	317 aa		2.13	□□□□□ -2.07
DOT6	YER088C	NDD1	Q08887	554 aa		2.13	□□□□□ -2.07
DOT6	YER088C	SIR4	P11978	1358 aa		2.13	□□□□□ -2.07
DOT6	YER088C	PUT2	P07275	575 aa		2.12	□□□□□ -2.07
DOT6	YER088C	RPS2	P25443	254 aa	Known RBP	2.12	□□□□□ -2.07
DOT6	YER088C	GID7	P25569	745 aa		2.12	□□□□□ -2.07
DOT6	YER088C	MGR1	P25573	417 aa		2.12	□□□□□ -2.07
DOT6	YER088C	AUR1	P36107	401 aa	Predicted RBP	2.12	□□□□□ -2.07
DOT6	YER088C	SPC34	P36131	295 aa		2.12	□□□□□ -2.07
DOT6	YER088C	YEL068C	P39977	110 aa		2.12	□□□□□ -2.07
DOT6	YER088C	NOP16	P40007	231 aa	Known RBP	2.12	□□□□□ -2.07
DOT6	YER088C	RGI2	P40188	164 aa		2.12	□□□□□ -2.07
DOT6	YER088C	RTS2	P40962	232 aa		2.12	□□□□□ -2.07
DOT6	YER088C	GUF1	P46943	645 aa		2.12	□□□□□ -2.07
DOT6	YER088C	NNF2	P53253	936 aa		2.12	□□□□□ -2.07
DOT6	YER088C	EFM6	P53970	246 aa		2.12	□□□□□ -2.07
DOT6	YER088C	RSF1	Q05043	376 aa		2.12	□□□□□ -2.07
DOT6	YER088C	PSR1	Q07800	427 aa		2.12	□□□□□ -2.07
DOT6	YER088C	NMD4	Q12129	218 aa		2.12	□□□□□ -2.07
DOT6	YER088C	BSC1	Q12140	328 aa		2.12	□□□□□ -2.07
DOT6	YER088C	SKM1	Q12469	655 aa		2.12	□□□□□ -2.07
DOT6	YER088C	SEM1	O94742	89 aa		2.12	□□□□□ -2.07
DOT6	YER088C	ARD1	P07347	238 aa	Predicted RBP	2.12	□□□□□ -2.07
DOT6	YER088C	HNM1	P19807	563 aa		2.12	□□□□□ -2.07
DOT6	YER088C	PUP3	P25451	205 aa	Known RBP	2.12	□□□□□ -2.07
DOT6	YER088C	YKL050C	P35736	922 aa		2.12	□□□□□ -2.07
DOT6	YER088C	MAL33	P38157	468 aa		2.12	□□□□□ -2.07
DOT6	YER088C	RTS1	P38903	757 aa		2.12	□□□□□ -2.07
DOT6	YER088C	IAH1	P41734	238 aa		2.12	□□□□□ -2.07
DOT6	YER088C	DUO1	P53168	247 aa	Known RBP	2.12	□□□□□ -2.07
DOT6	YER088C	RPC11	Q04307	110 aa	Predicted RBP	2.12	□□□□□ -2.07
DOT6	YER088C	APL4	Q12028	832 aa		2.12	□□□□□ -2.07
DOT6	YER088C	NCE102	Q12207	173 aa	RIP-Chip data	2.12	□□□□□ -2.07	not detected
DOT6	YER088C	FAS2	P19097	1887 aa	Known RBP	2.12	□□□□□ -2.07
DOT6	YER088C	AAC3	P18238	307 aa		2.11	□□□□□ -2.07
DOT6	YER088C	RPB8	P20436	146 aa		2.11	□□□□□ -2.07
DOT6	YER088C	SAN1	P22470	610 aa		2.11	□□□□□ -2.07
DOT6	YER088C	LCB1	P25045	558 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	ADH7	P25377	361 aa		2.11	□□□□□ -2.07
DOT6	YER088C	SAC6	P32599	642 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	MTR2	P34232	184 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	NUP133	P36161	1157 aa		2.11	□□□□□ -2.07
DOT6	YER088C	RKM3	P38222	552 aa		2.11	□□□□□ -2.07
DOT6	YER088C	MEP2	P41948	499 aa		2.11	□□□□□ -2.07
DOT6	YER088C	DIA3	P52290	468 aa		2.11	□□□□□ -2.07
DOT6	YER088C	ERG26	P53199	349 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	DRN1	P53255	507 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	SOL4	P53315	255 aa		2.11	□□□□□ -2.07
DOT6	YER088C	YMR018W	Q04364	514 aa		2.11	□□□□□ -2.07
DOT6	YER088C	YLR281C	Q05863	155 aa		2.11	□□□□□ -2.07
DOT6	YER088C	YDL121C	Q07541	149 aa		2.11	□□□□□ -2.07
DOT6	YER088C	ETT1	Q08421	412 aa	Known RBP	2.11	□□□□□ -2.07
DOT6	YER088C	YOR111W	Q99210	232 aa		2.11	□□□□□ -2.07
DOT6	YER088C	SNF3	P10870	884 aa		2.1	□□□□□ -2.07
DOT6	YER088C	BAR1	P12630	587 aa		2.1	□□□□□ -2.07
DOT6	YER088C	BUD5	P25300	642 aa	Predicted RBP	2.1	□□□□□ -2.07
DOT6	YER088C	RAD24	P32641	659 aa		2.1	□□□□□ -2.07
DOT6	YER088C	VRG4	P40107	337 aa		2.1	□□□□□ -2.07
DOT6	YER088C	HOS2	P53096	452 aa	Predicted RBP	2.1	□□□□□ -2.07
DOT6	YER088C	FMP42	Q04991	504 aa		2.1	□□□□□ -2.07
DOT6	YER088C	GRC3	Q07845	632 aa		2.1	□□□□□ -2.07
DOT6	YER088C	TCO89	Q08921	799 aa		2.1	□□□□□ -2.07
DOT6	YER088C	LEU9	Q12166	604 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	RPO41	P13433	1351 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	TOP1	P04786	769 aa		2.1	□□□□□ -2.07
DOT6	YER088C	OLE1	P21147	510 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	VMA16	P23968	213 aa		2.1	□□□□□ -2.07
DOT6	YER088C	POL4	P25615	582 aa		2.1	□□□□□ -2.07
DOT6	YER088C	IMP2'	P32351	346 aa		2.1	□□□□□ -2.07
DOT6	YER088C	SSE2	P32590	693 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	TIF3	P34167	436 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	YBL055C	P34220	418 aa	Predicted RBP	2.1	□□□□□ -2.07
DOT6	YER088C	STV1	P37296	890 aa		2.1	□□□□□ -2.07
DOT6	YER088C	ERG7	P38604	731 aa		2.1	□□□□□ -2.07
DOT6	YER088C	ATG27	P46989	271 aa		2.1	□□□□□ -2.07
DOT6	YER088C	YNL234W	P53857	426 aa		2.1	□□□□□ -2.07
DOT6	YER088C	EMI2	Q04409	500 aa	Known RBP	2.1	□□□□□ -2.07
DOT6	YER088C	LUC7	Q07508	261 aa	Predicted RBP	2.1	□□□□□ -2.07
DOT6	YER088C	TEN1	Q07921	160 aa		2.1	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 121.2 ms