RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W YMR160WQ03823 816 aa3.73□□□□□ -1.81
RPN9YDR427W YDR415CQ04033 374 aaPredicted RBP3.73□□□□□ -1.81
RPN9YDR427W IMH1Q06704 911 aaKnown RBP3.73□□□□□ -1.81
RPN9YDR427W THI20Q08224 551 aa3.73□□□□□ -1.81
RPN9YDR427W FMP40Q08968 688 aaPredicted RBP3.73□□□□□ -1.81
RPN9YDR427W PDH1Q12428 516 aaKnown RBP3.73□□□□□ -1.81
RPN9YDR427W YMR230W-AQ3E7B5 62 aa3.73□□□□□ -1.81
RPN9YDR427W YPT6Q99260 215 aa3.73□□□□□ -1.81
RPN9YDR427W SEC53P07283 254 aaKnown RBP3.72□□□□□ -1.81
RPN9YDR427W PMS1P14242 873 aa3.72□□□□□ -1.81
RPN9YDR427W TYR1P20049 452 aa3.72□□□□□ -1.81
RPN9YDR427W GFD2P25370 566 aaKnown RBP3.72□□□□□ -1.81
RPN9YDR427W YTA12P40341 825 aa3.72□□□□□ -1.81
RPN9YDR427W YPL014WQ02606 381 aa3.72□□□□□ -1.81
RPN9YDR427W RPM2Q02773 1202 aa3.72□□□□□ -1.81
RPN9YDR427W HCR1Q05775 265 aaKnown RBP3.72□□□□□ -1.81
RPN9YDR427W YEH2Q07950 538 aa3.72□□□□□ -1.81
RPN9YDR427W DAP1Q12091 152 aa3.72□□□□□ -1.81
RPN9YDR427W ENT1Q12518 454 aa3.72□□□□□ -1.81
RPN9YDR427W YJR112W-AQ3E743 109 aa3.72□□□□□ -1.81
RPN9YDR427W MRS3P10566 314 aa3.71□□□□□ -1.82
RPN9YDR427W MRP13P12686 339 aa3.71□□□□□ -1.82
RPN9YDR427W PEP5P12868 1029 aa3.71□□□□□ -1.82
RPN9YDR427W CIN4P39110 191 aa3.71□□□□□ -1.82
RPN9YDR427W TMA108P40462 946 aa3.71□□□□□ -1.82
RPN9YDR427W MRX6P48564 524 aa3.71□□□□□ -1.82
RPN9YDR427W DSD1P53095 428 aa3.71□□□□□ -1.82
RPN9YDR427W DRN1P53255 507 aaKnown RBP3.71□□□□□ -1.82
RPN9YDR427W RPC11Q04307 110 aaPredicted RBP3.71□□□□□ -1.82
RPN9YDR427W RBA50Q04418 439 aa3.71□□□□□ -1.82
RPN9YDR427W FMP45Q07651 309 aa3.71□□□□□ -1.82
RPN9YDR427W YOR365CQ08844 703 aa3.71□□□□□ -1.82
RPN9YDR427W PEP4P07267 405 aaKnown RBP3.7□□□□□ -1.82
RPN9YDR427W ART10P18634 518 aaKnown RBP3.7□□□□□ -1.82
RPN9YDR427W ELO2P25358 347 aa3.7□□□□□ -1.82
RPN9YDR427W SGF29P25554 259 aa3.7□□□□□ -1.82
RPN9YDR427W ECM15P35195 104 aa3.7□□□□□ -1.82
RPN9YDR427W YKL023WP36103 277 aaKnown RBP3.7□□□□□ -1.82
RPN9YDR427W YHR210CP38893 341 aa3.7□□□□□ -1.82
RPN9YDR427W SNG1P46950 547 aa3.7□□□□□ -1.82
RPN9YDR427W YMR087WQ04299 284 aa3.7□□□□□ -1.82
RPN9YDR427W CDC45Q08032 650 aa3.7□□□□□ -1.82
RPN9YDR427W SDH5Q08230 162 aa3.7□□□□□ -1.82
RPN9YDR427W CTI6Q08923 506 aa3.7□□□□□ -1.82
RPN9YDR427W YML002WP0CF17 737 aa3.69□□□□□ -1.82
RPN9YDR427W VPS17P32913 551 aa3.69□□□□□ -1.82
RPN9YDR427W LOS1P33418 1100 aaPredicted RBP3.69□□□□□ -1.82
RPN9YDR427W UBP11P36026 717 aa3.69□□□□□ -1.82
RPN9YDR427W YJL068CP40363 299 aa3.69□□□□□ -1.82
RPN9YDR427W CSM2P40465 213 aa3.69□□□□□ -1.82
RPN9YDR427W YJR154WP47181 346 aa3.69□□□□□ -1.82
RPN9YDR427W ALT2P52892 507 aa3.69□□□□□ -1.82
RPN9YDR427W YGR126WP53274 230 aa3.69□□□□□ -1.82
RPN9YDR427W BUD32P53323 261 aa3.69□□□□□ -1.82
RPN9YDR427W SHR3Q02774 210 aa3.69□□□□□ -1.82
RPN9YDR427W BUD21Q08492 214 aaPredicted RBP3.69□□□□□ -1.82
RPN9YDR427W RCN2Q12044 265 aa3.69□□□□□ -1.82
RPN9YDR427W RRI2Q12348 645 aa3.69□□□□□ -1.82
RPN9YDR427W SUC2P00724 532 aa3.68□□□□□ -1.82
RPN9YDR427W SEF1P34228 1148 aa3.68□□□□□ -1.82
RPN9YDR427W RRP3P38712 501 aaKnown RBP3.68□□□□□ -1.82
RPN9YDR427W DHH1P39517 506 aaKnown RBP3.68□□□□□ -1.82
RPN9YDR427W SGN1P40561 250 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPN9YDR427W VID30P53076 958 aa3.68□□□□□ -1.82
RPN9YDR427W ARE2P53629 642 aaKnown RBP3.68□□□□□ -1.82
RPN9YDR427W VPS75P53853 264 aa3.68□□□□□ -1.82
RPN9YDR427W DUG3P53871 357 aa3.68□□□□□ -1.82
RPN9YDR427W CRZ1P53968 678 aa3.68□□□□□ -1.82
RPN9YDR427W BNA5Q05979 453 aa3.68□□□□□ -1.82
RPN9YDR427W AMD1P15274 810 aaKnown RBP3.67□□□□□ -1.82
RPN9YDR427W MET8P15807 274 aa3.67□□□□□ -1.82
RPN9YDR427W EST1P17214 699 aaPredicted RBP3.67□□□□□ -1.82
RPN9YDR427W PRD1P25375 712 aa3.67□□□□□ -1.82
RPN9YDR427W SIP2P34164 415 aaKnown RBP3.67□□□□□ -1.82
RPN9YDR427W TCD2P36101 447 aaKnown RBP3.67□□□□□ -1.82
RPN9YDR427W YBR225WP38321 900 aa3.67□□□□□ -1.82
RPN9YDR427W NPR2P39923 615 aa3.67□□□□□ -1.82
RPN9YDR427W AFG3P39925 761 aa3.67□□□□□ -1.82
RPN9YDR427W ALG5P40350 334 aa3.67□□□□□ -1.82
RPN9YDR427W YGL082WP53155 381 aa3.67□□□□□ -1.82
RPN9YDR427W YGR066CP53242 292 aa3.67□□□□□ -1.82
RPN9YDR427W IPI3P53877 555 aa3.67□□□□□ -1.82
RPN9YDR427W GLO2Q05584 274 aa3.67□□□□□ -1.82
RPN9YDR427W COQ9Q05779 260 aa3.67□□□□□ -1.82
RPN9YDR427W MED1Q12321 566 aa3.67□□□□□ -1.82
RPN9YDR427W SGS1P35187 1447 aa3.67□□□□□ -1.82
RPN9YDR427W RAD52P06778 471 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W CBS1P14066 229 aa3.66□□□□□ -1.82
RPN9YDR427W APE1P14904 514 aa3.66□□□□□ -1.82
RPN9YDR427W PDA1P16387 420 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W SUI2P20459 304 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W SEC62P21825 274 aa3.66□□□□□ -1.82
RPN9YDR427W SWE1P32944 819 aa3.66□□□□□ -1.82
RPN9YDR427W MUM2P38236 366 aa3.66□□□□□ -1.82
RPN9YDR427W OSH3P38713 996 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W MET28P40573 187 aa3.66□□□□□ -1.82
RPN9YDR427W IKS1P47042 667 aa3.66□□□□□ -1.82
RPN9YDR427W AIM22P47051 409 aa3.66□□□□□ -1.82
RPN9YDR427W IMD4P50094 524 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W TOF2Q02208 771 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms