RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C BUD21Q08492 214 aaPredicted RBP3.72□□□□□ -1.81
SRB7YDR308C PDA1P16387 420 aaKnown RBP3.71□□□□□ -1.82
SRB7YDR308C SYN8P31377 255 aa3.71□□□□□ -1.82
SRB7YDR308C VPS17P32913 551 aa3.71□□□□□ -1.82
SRB7YDR308C CIN4P39110 191 aa3.71□□□□□ -1.82
SRB7YDR308C YJL070CP40361 888 aa3.71□□□□□ -1.82
SRB7YDR308C RMD8P43620 662 aa3.71□□□□□ -1.82
SRB7YDR308C HOS2P53096 452 aaPredicted RBP3.71□□□□□ -1.82
SRB7YDR308C SUB1P54000 292 aaKnown RBP3.71□□□□□ -1.82
SRB7YDR308C RPT6Q01939 405 aaKnown RBP3.71□□□□□ -1.82
SRB7YDR308C SVL3Q03088 825 aaKnown RBP3.71□□□□□ -1.82
SRB7YDR308C YMR317WQ04893 1140 aa3.71□□□□□ -1.82
SRB7YDR308C RTT109Q07794 436 aa3.71□□□□□ -1.82
SRB7YDR308C PDH1Q12428 516 aaKnown RBP3.71□□□□□ -1.82
SRB7YDR308C TOP1P04786 769 aa3.7□□□□□ -1.82
SRB7YDR308C PEP5P12868 1029 aa3.7□□□□□ -1.82
SRB7YDR308C CBS1P14066 229 aa3.7□□□□□ -1.82
SRB7YDR308C ART10P18634 518 aaKnown RBP3.7□□□□□ -1.82
SRB7YDR308C MTR2P34232 184 aaKnown RBP3.7□□□□□ -1.82
SRB7YDR308C FMP46P36141 133 aaKnown RBP3.7□□□□□ -1.82
SRB7YDR308C DIM1P41819 318 aaKnown RBP3.7□□□□□ -1.82
SRB7YDR308C SAM50P53969 484 aa3.7□□□□□ -1.82
SRB7YDR308C YKU80Q04437 629 aa3.7□□□□□ -1.82
SRB7YDR308C YEH1Q07804 573 aa3.7□□□□□ -1.82
SRB7YDR308C CTI6Q08923 506 aa3.7□□□□□ -1.82
SRB7YDR308C NMD4Q12129 218 aa3.7□□□□□ -1.82
SRB7YDR308C YPT6Q99260 215 aa3.7□□□□□ -1.82
SRB7YDR308C YML002WP0CF17 737 aa3.69□□□□□ -1.82
SRB7YDR308C MRP13P12686 339 aa3.69□□□□□ -1.82
SRB7YDR308C PMS1P14242 873 aa3.69□□□□□ -1.82
SRB7YDR308C YME1P32795 747 aa3.69□□□□□ -1.82
SRB7YDR308C SPC34P36131 295 aa3.69□□□□□ -1.82
SRB7YDR308C DOT5P40553 215 aa3.69□□□□□ -1.82
SRB7YDR308C IKS1P47042 667 aa3.69□□□□□ -1.82
SRB7YDR308C UPF3P48412 387 aaKnown RBP3.69□□□□□ -1.82
SRB7YDR308C MRX6P48564 524 aa3.69□□□□□ -1.82
SRB7YDR308C RBA50Q04418 439 aa3.69□□□□□ -1.82
SRB7YDR308C DAP1Q12091 152 aa3.69□□□□□ -1.82
SRB7YDR308C CAR1P00812 333 aaKnown RBP3.68□□□□□ -1.82
SRB7YDR308C GCN4P03069 281 aa3.68□□□□□ -1.82
SRB7YDR308C CDC23P16522 626 aa3.68□□□□□ -1.82
SRB7YDR308C SEC1P30619 724 aaKnown RBP3.68□□□□□ -1.82
SRB7YDR308C ECM15P35195 104 aa3.68□□□□□ -1.82
SRB7YDR308C APT1P49435 187 aaKnown RBP3.68□□□□□ -1.82
SRB7YDR308C IMD4P50094 524 aaKnown RBP3.68□□□□□ -1.82
SRB7YDR308C YGR066CP53242 292 aa3.68□□□□□ -1.82
SRB7YDR308C BUD32P53323 261 aa3.68□□□□□ -1.82
SRB7YDR308C RHO4Q00246 291 aa3.68□□□□□ -1.82
SRB7YDR308C VPS38Q05919 439 aa3.68□□□□□ -1.82
SRB7YDR308C YJR112W-AQ3E743 109 aa3.68□□□□□ -1.82
SRB7YDR308C GAL80P04387 435 aa3.67□□□□□ -1.82
SRB7YDR308C RPS2P25443 254 aaKnown RBP3.67□□□□□ -1.82
SRB7YDR308C PAP1P29468 568 aaKnown RBP3.67□□□□□ -1.82
SRB7YDR308C PTR2P32901 601 aa3.67□□□□□ -1.82
SRB7YDR308C YER130CP39959 443 aa3.67□□□□□ -1.82
SRB7YDR308C GUF1P46943 645 aa3.67□□□□□ -1.82
SRB7YDR308C THP1Q08231 455 aa3.67□□□□□ -1.82
SRB7YDR308C YPL272CQ08984 517 aa3.67□□□□□ -1.82
SRB7YDR308C HSH49Q99181 213 aaPredicted RBP3.67□□□□□ -1.82
SRB7YDR308C CYB2P00175 591 aa3.66□□□□□ -1.82
SRB7YDR308C APE1P14904 514 aa3.66□□□□□ -1.82
SRB7YDR308C TIF3P34167 436 aaKnown RBP3.66□□□□□ -1.82
SRB7YDR308C SRO77P38163 1010 aa3.66□□□□□ -1.82
SRB7YDR308C YTA12P40341 825 aa3.66□□□□□ -1.82
SRB7YDR308C ALT2P52892 507 aa3.66□□□□□ -1.82
SRB7YDR308C TOF2Q02208 771 aa3.66□□□□□ -1.82
SRB7YDR308C MSC1Q03104 513 aa3.66□□□□□ -1.82
SRB7YDR308C RLM1Q12224 676 aa3.66□□□□□ -1.82
SRB7YDR308C MTF1P14908 341 aaKnown RBP3.65□□□□□ -1.83
SRB7YDR308C NDC1P32500 655 aa3.65□□□□□ -1.83
SRB7YDR308C SHP1P34223 423 aa3.65□□□□□ -1.83
SRB7YDR308C TCD2P36101 447 aaKnown RBP3.65□□□□□ -1.83
SRB7YDR308C OSH3P38713 996 aaKnown RBP3.65□□□□□ -1.83
SRB7YDR308C MSR1P38714 643 aa3.65□□□□□ -1.83
SRB7YDR308C CCT6P39079 546 aa3.65□□□□□ -1.83
SRB7YDR308C SGN1P40561 250 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SRB7YDR308C ALK1P43633 760 aaKnown RBP3.65□□□□□ -1.83
SRB7YDR308C IVY1Q04934 453 aa3.65□□□□□ -1.83
SRB7YDR308C COQ9Q05779 260 aa3.65□□□□□ -1.83
SRB7YDR308C THI20Q08224 551 aa3.65□□□□□ -1.83
SRB7YDR308C AVL9Q12500 764 aa3.65□□□□□ -1.83
SRB7YDR308C YML133CQ03099 1374 aa3.64□□□□□ -1.83
SRB7YDR308C YLL067CQ07888 1374 aa3.64□□□□□ -1.83
SRB7YDR308C YLL066CQ99208 1374 aa3.64□□□□□ -1.83
SRB7YDR308C FOB1O13329 566 aa3.64□□□□□ -1.83
SRB7YDR308C OLE1P21147 510 aaKnown RBP3.64□□□□□ -1.83
SRB7YDR308C OCA4P25366 362 aa3.64□□□□□ -1.83
SRB7YDR308C BNA4P38169 460 aa3.64□□□□□ -1.83
SRB7YDR308C MDM31P38880 579 aa3.64□□□□□ -1.83
SRB7YDR308C CCT4P39078 528 aaKnown RBP3.64□□□□□ -1.83
SRB7YDR308C VPS52P39904 641 aa3.64□□□□□ -1.83
SRB7YDR308C CSM2P40465 213 aa3.64□□□□□ -1.83
SRB7YDR308C CAF130P53280 1122 aaPredicted RBP3.64□□□□□ -1.83
SRB7YDR308C VPS75P53853 264 aa3.64□□□□□ -1.83
SRB7YDR308C YDR239CQ03780 787 aa3.64□□□□□ -1.83
SRB7YDR308C RAD52P06778 471 aaKnown RBP3.63□□□□□ -1.83
SRB7YDR308C SIP2P34164 415 aaKnown RBP3.63□□□□□ -1.83
SRB7YDR308C CST26P38226 397 aa3.63□□□□□ -1.83
SRB7YDR308C YBR225WP38321 900 aa3.63□□□□□ -1.83
SRB7YDR308C YHR210CP38893 341 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms