RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W CDC31P06704 161 aaKnown RBP3.7□□□□□ -1.82
UBC9YDL064W PDA1P16387 420 aaKnown RBP3.7□□□□□ -1.82
UBC9YDL064W MCM4P30665 933 aaKnown RBP3.7□□□□□ -1.82
UBC9YDL064W WBP1P33767 430 aaKnown RBP3.7□□□□□ -1.82
UBC9YDL064W PET130P47065 347 aa3.7□□□□□ -1.82
UBC9YDL064W YPL014WQ02606 381 aa3.7□□□□□ -1.82
UBC9YDL064W YDR239CQ03780 787 aa3.7□□□□□ -1.82
UBC9YDL064W SRL1Q08673 210 aa3.7□□□□□ -1.82
UBC9YDL064W AVL9Q12500 764 aa3.7□□□□□ -1.82
UBC9YDL064W FOB1O13329 566 aa3.69□□□□□ -1.82
UBC9YDL064W PEP4P07267 405 aaKnown RBP3.69□□□□□ -1.82
UBC9YDL064W CKA1P15790 372 aa3.69□□□□□ -1.82
UBC9YDL064W HNM1P19807 563 aa3.69□□□□□ -1.82
UBC9YDL064W OCA4P25366 362 aa3.69□□□□□ -1.82
UBC9YDL064W GPI10P30777 616 aa3.69□□□□□ -1.82
UBC9YDL064W PHD1P36093 366 aa3.69□□□□□ -1.82
UBC9YDL064W EFM2P38347 419 aa3.69□□□□□ -1.82
UBC9YDL064W ERG7P38604 731 aa3.69□□□□□ -1.82
UBC9YDL064W YER130CP39959 443 aa3.69□□□□□ -1.82
UBC9YDL064W SNG1P46950 547 aa3.69□□□□□ -1.82
UBC9YDL064W AIM22P47051 409 aa3.69□□□□□ -1.82
UBC9YDL064W YGR066CP53242 292 aa3.69□□□□□ -1.82
UBC9YDL064W YGR126WP53274 230 aa3.69□□□□□ -1.82
UBC9YDL064W SEC5P89102 971 aa3.69□□□□□ -1.82
UBC9YDL064W YVH1Q02256 364 aaKnown RBP3.69□□□□□ -1.82
UBC9YDL064W DFR1P07807 211 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
UBC9YDL064W LAG1P38703 411 aa3.68□□□□□ -1.82
UBC9YDL064W MSR1P38714 643 aa3.68□□□□□ -1.82
UBC9YDL064W KEL1P38853 1164 aaKnown RBP3.68□□□□□ -1.82
UBC9YDL064W CIN4P39110 191 aa3.68□□□□□ -1.82
UBC9YDL064W YND1P40009 630 aa3.68□□□□□ -1.82
UBC9YDL064W YIL169CP40442 995 aa3.68□□□□□ -1.82
UBC9YDL064W MET18P40469 1032 aa3.68□□□□□ -1.82
UBC9YDL064W AXL1P40851 1208 aa3.68□□□□□ -1.82
UBC9YDL064W ARF3P40994 183 aaRIP-Chip data3.68□□□□□ -1.82 RIP-Chip
UBC9YDL064W AZF1P41696 914 aa3.68□□□□□ -1.82
UBC9YDL064W IAH1P41734 238 aa3.68□□□□□ -1.82
UBC9YDL064W TAF11Q04226 346 aa3.68□□□□□ -1.82
UBC9YDL064W ETT1Q08421 412 aaKnown RBP3.68□□□□□ -1.82
UBC9YDL064W PDH1Q12428 516 aaKnown RBP3.68□□□□□ -1.82
UBC9YDL064W BAR1P12630 587 aa3.67□□□□□ -1.82
UBC9YDL064W PMS1P14242 873 aa3.67□□□□□ -1.82
UBC9YDL064W ROX1P25042 368 aa3.67□□□□□ -1.82
UBC9YDL064W PRD1P25375 712 aa3.67□□□□□ -1.82
UBC9YDL064W SNC1P31109 117 aa3.67□□□□□ -1.82
UBC9YDL064W CST26P38226 397 aa3.67□□□□□ -1.82
UBC9YDL064W YMR160WQ03823 816 aa3.67□□□□□ -1.82
UBC9YDL064W RSF1Q05043 376 aa3.67□□□□□ -1.82
UBC9YDL064W SSK1Q07084 712 aa3.67□□□□□ -1.82
UBC9YDL064W FMP45Q07651 309 aa3.67□□□□□ -1.82
UBC9YDL064W CDC45Q08032 650 aa3.67□□□□□ -1.82
UBC9YDL064W GRX6Q12438 231 aa3.67□□□□□ -1.82
UBC9YDL064W HSH49Q99181 213 aaPredicted RBP3.67□□□□□ -1.82
UBC9YDL064W RAD52P06778 471 aaKnown RBP3.66□□□□□ -1.82
UBC9YDL064W GLN3P18494 730 aa3.66□□□□□ -1.82
UBC9YDL064W MRE11P32829 692 aa3.66□□□□□ -1.82
UBC9YDL064W PMT1P33775 817 aa3.66□□□□□ -1.82
UBC9YDL064W SPC34P36131 295 aa3.66□□□□□ -1.82
UBC9YDL064W ROK1P45818 564 aaPredicted RBP3.66□□□□□ -1.82
UBC9YDL064W GUF1P46943 645 aa3.66□□□□□ -1.82
UBC9YDL064W JJJ1P53863 590 aa3.66□□□□□ -1.82
UBC9YDL064W TOF2Q02208 771 aa3.66□□□□□ -1.82
UBC9YDL064W SHR3Q02774 210 aa3.66□□□□□ -1.82
UBC9YDL064W YDR415CQ04033 374 aaPredicted RBP3.66□□□□□ -1.82
UBC9YDL064W YMR087WQ04299 284 aa3.66□□□□□ -1.82
UBC9YDL064W FMP42Q04991 504 aa3.66□□□□□ -1.82
UBC9YDL064W MRD1Q06106 887 aaKnown RBP3.66□□□□□ -1.82
UBC9YDL064W YOR365CQ08844 703 aa3.66□□□□□ -1.82
UBC9YDL064W CSR2Q12734 1121 aa3.66□□□□□ -1.82
UBC9YDL064W PGA3Q12746 312 aaKnown RBP3.66□□□□□ -1.82
UBC9YDL064W PEP5P12868 1029 aa3.65□□□□□ -1.83
UBC9YDL064W ACH1P32316 526 aa3.65□□□□□ -1.83
UBC9YDL064W RAD24P32641 659 aa3.65□□□□□ -1.83
UBC9YDL064W YME1P32795 747 aa3.65□□□□□ -1.83
UBC9YDL064W YHR210CP38893 341 aa3.65□□□□□ -1.83
UBC9YDL064W ATG27P46989 271 aa3.65□□□□□ -1.83
UBC9YDL064W CAF130P53280 1122 aaPredicted RBP3.65□□□□□ -1.83
UBC9YDL064W TDA7P53882 636 aaPredicted RBP3.65□□□□□ -1.83
UBC9YDL064W RHO4Q00246 291 aa3.65□□□□□ -1.83
UBC9YDL064W MSS11Q03825 758 aa3.65□□□□□ -1.83
UBC9YDL064W SYF1Q04048 859 aaPredicted RBP3.65□□□□□ -1.83
UBC9YDL064W RBA50Q04418 439 aa3.65□□□□□ -1.83
UBC9YDL064W RIM20Q12033 661 aa3.65□□□□□ -1.83
UBC9YDL064W YOL159C-AQ3E769 90 aa3.65□□□□□ -1.83
UBC9YDL064W RED1P14291 827 aa3.64□□□□□ -1.83
UBC9YDL064W PPZ1P26570 692 aa3.64□□□□□ -1.83
UBC9YDL064W SEC1P30619 724 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W ERG3P32353 365 aa3.64□□□□□ -1.83
UBC9YDL064W ERG1P32476 496 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W SHP1P34223 423 aa3.64□□□□□ -1.83
UBC9YDL064W YKL023WP36103 277 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W JNM1P36224 373 aa3.64□□□□□ -1.83
UBC9YDL064W TCM62P38228 572 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W VID24P38263 362 aa3.64□□□□□ -1.83
UBC9YDL064W TIF4631P39935 952 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W SNM1P40993 198 aa3.64□□□□□ -1.83
UBC9YDL064W LSC1P53598 329 aaKnown RBP3.64□□□□□ -1.83
UBC9YDL064W SAM50P53969 484 aa3.64□□□□□ -1.83
UBC9YDL064W FIN1Q03898 291 aa3.64□□□□□ -1.83
UBC9YDL064W YLR287CQ05881 355 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms