RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C NRD1P53617 575 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SSK22YCR073C PRP38Q00723 242 aaPredicted RBP5.63□□□□□ -1.51
SSK22YCR073C RSM28Q03430 361 aa5.63□□□□□ -1.51
SSK22YCR073C ARX1Q03862 593 aaKnown RBP5.63□□□□□ -1.51
SSK22YCR073C ARA2Q04212 335 aa5.63□□□□□ -1.51
SSK22YCR073C TRM12Q04235 462 aa5.63□□□□□ -1.51
SSK22YCR073C HXT2P23585 541 aa5.62□□□□□ -1.51
SSK22YCR073C CNB1P25296 175 aa5.62□□□□□ -1.51
SSK22YCR073C RVS161P25343 265 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C YCR090CP25654 182 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C ARP2P32381 391 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C IXR1P33417 597 aa5.62□□□□□ -1.51
SSK22YCR073C NIC96P34077 839 aa5.62□□□□□ -1.51
SSK22YCR073C MCM7P38132 845 aa5.62□□□□□ -1.51
SSK22YCR073C SFB3P38810 929 aa5.62□□□□□ -1.51
SSK22YCR073C GEP4P38812 185 aa5.62□□□□□ -1.51
SSK22YCR073C CRP1P38845 465 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C YHR219WP38900 624 aa5.62□□□□□ -1.51
SSK22YCR073C ESL1P40456 1118 aa5.62□□□□□ -1.51
SSK22YCR073C PLB3Q08108 686 aa5.62□□□□□ -1.51
SSK22YCR073C TIF6Q12522 245 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C ARG81P05085 880 aa5.62□□□□□ -1.51
SSK22YCR073C GAL3P13045 520 aa5.62□□□□□ -1.51
SSK22YCR073C SEC15P22224 910 aa5.62□□□□□ -1.51
SSK22YCR073C ATP7P30902 174 aa5.62□□□□□ -1.51
SSK22YCR073C MRPL7P36519 292 aa5.62□□□□□ -1.51
SSK22YCR073C MRPL17P36528 281 aa5.62□□□□□ -1.51
SSK22YCR073C FMP23P38231 175 aa5.62□□□□□ -1.51
SSK22YCR073C YEN1P40028 759 aa5.62□□□□□ -1.51
SSK22YCR073C MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C YJL007CP47080 104 aa5.62□□□□□ -1.51
SSK22YCR073C NBP35P52920 328 aa5.62□□□□□ -1.51
SSK22YCR073C MON1P53129 644 aa5.62□□□□□ -1.51
SSK22YCR073C CUL3P53202 744 aa5.62□□□□□ -1.51
SSK22YCR073C COG5P53951 403 aa5.62□□□□□ -1.51
SSK22YCR073C SMA1Q02651 245 aa5.62□□□□□ -1.51
SSK22YCR073C SVL3Q03088 825 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C NHX1Q04121 633 aa5.62□□□□□ -1.51
SSK22YCR073C ARR2Q06597 130 aa5.62□□□□□ -1.51
SSK22YCR073C PHO84P25297 587 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C YCR102CP25608 368 aa5.62□□□□□ -1.51
SSK22YCR073C PPZ1P26570 692 aa5.62□□□□□ -1.51
SSK22YCR073C PTM1P32857 523 aa5.62□□□□□ -1.51
SSK22YCR073C TVP38P36164 337 aa5.62□□□□□ -1.51
SSK22YCR073C SPF1P39986 1215 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C VMA13P41807 478 aaKnown RBP5.62□□□□□ -1.51
SSK22YCR073C INN1P53901 409 aa5.62□□□□□ -1.51
SSK22YCR073C FIN1Q03898 291 aa5.62□□□□□ -1.51
SSK22YCR073C YOL131WQ08270 108 aa5.62□□□□□ -1.51
SSK22YCR073C PEX1P24004 1043 aa5.61□□□□□ -1.51
SSK22YCR073C MSC7P38694 644 aa5.61□□□□□ -1.51
SSK22YCR073C MTG2P38860 518 aa5.61□□□□□ -1.51
SSK22YCR073C PSF2P40359 213 aa5.61□□□□□ -1.51
SSK22YCR073C SEC28P40509 296 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C ALT2P52892 507 aa5.61□□□□□ -1.51
SSK22YCR073C MET13P53128 600 aa5.61□□□□□ -1.51
SSK22YCR073C NAM8Q00539 523 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C JIP5Q06214 492 aaPredicted RBP5.61□□□□□ -1.51
SSK22YCR073C ATG20Q07528 640 aa5.61□□□□□ -1.51
SSK22YCR073C ATP16Q12165 160 aa5.61□□□□□ -1.51
SSK22YCR073C COX5AP00424 153 aa5.61□□□□□ -1.51
SSK22YCR073C RAD7P06779 565 aa5.61□□□□□ -1.51
SSK22YCR073C SSA1P10591 642 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C YCL068CP25593 260 aa5.61□□□□□ -1.51
SSK22YCR073C GCD10P41814 478 aa5.61□□□□□ -1.51
SSK22YCR073C HMS2P47175 358 aa5.61□□□□□ -1.51
SSK22YCR073C AAD10P47182 288 aa5.61□□□□□ -1.51
SSK22YCR073C YNR063WP53749 607 aa5.61□□□□□ -1.51
SSK22YCR073C YMR226CQ05016 267 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C GRS2Q06817 618 aa5.61□□□□□ -1.51
SSK22YCR073C THP3Q12049 470 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C CYC1P00044 109 aaPredicted RBP5.61□□□□□ -1.51
SSK22YCR073C GAP1P19145 602 aaPredicted RBP5.61□□□□□ -1.51
SSK22YCR073C RPT1P33299 467 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C ALG11P53954 548 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C ARP4P80428 489 aa5.61□□□□□ -1.51
SSK22YCR073C MTD1Q02046 320 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C RRT8Q08219 342 aa5.61□□□□□ -1.51
SSK22YCR073C SLF1Q12034 447 aaKnown RBP5.61□□□□□ -1.51
SSK22YCR073C RAD59Q12223 238 aa5.61□□□□□ -1.51
SSK22YCR073C ERG20P08524 352 aaKnown RBP5.6□□□□□ -1.51
SSK22YCR073C GLN3P18494 730 aa5.6□□□□□ -1.51
SSK22YCR073C AAT2P23542 418 aaKnown RBP5.6□□□□□ -1.51
SSK22YCR073C RFS1P38234 210 aaKnown RBP5.6□□□□□ -1.51
SSK22YCR073C YHR054CP38780 354 aa5.6□□□□□ -1.51
SSK22YCR073C RSC30P38781 883 aa5.6□□□□□ -1.51
SSK22YCR073C SHU2P38957 223 aa5.6□□□□□ -1.51
SSK22YCR073C VMA7P39111 118 aa5.6□□□□□ -1.51
SSK22YCR073C YJR098CP47139 656 aa5.6□□□□□ -1.51
SSK22YCR073C GNP1P48813 663 aa5.6□□□□□ -1.51
SSK22YCR073C MPC1P53157 130 aaKnown RBP5.6□□□□□ -1.51
SSK22YCR073C LSM3P57743 89 aaKnown RBP5.6□□□□□ -1.51
SSK22YCR073C PEX13P80667 386 aa5.6□□□□□ -1.51
SSK22YCR073C MET14Q02196 202 aa5.6□□□□□ -1.51
SSK22YCR073C RCF1Q03713 159 aa5.6□□□□□ -1.51
SSK22YCR073C TPO1Q07824 586 aa5.6□□□□□ -1.51
SSK22YCR073C CFT2Q12102 859 aaPredicted RBP5.6□□□□□ -1.51
SSK22YCR073C REC8Q12188 680 aa5.6□□□□□ -1.51
SSK22YCR073C MDY2Q12285 212 aa5.6□□□□□ -1.51
SSK22YCR073C SAS5Q99314 248 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms