RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YKR015CP36111 568 aa4.02□□□□□ -1.77
PTA1YAL043C ARN1P38731 627 aa4.02□□□□□ -1.77
PTA1YAL043C ETP1P38748 585 aaKnown RBP4.02□□□□□ -1.77
PTA1YAL043C CYC2P38909 366 aa4.02□□□□□ -1.77
PTA1YAL043C MXR1P40029 184 aa4.02□□□□□ -1.77
PTA1YAL043C COA1P40452 197 aa4.02□□□□□ -1.77
PTA1YAL043C MET18P40469 1032 aa4.02□□□□□ -1.77
PTA1YAL043C RTT101P47050 842 aa4.02□□□□□ -1.77
PTA1YAL043C TIS11P47977 285 aa4.02□□□□□ -1.77
PTA1YAL043C BOL2P53082 120 aa4.02□□□□□ -1.77
PTA1YAL043C CDC14Q00684 551 aa4.02□□□□□ -1.77
PTA1YAL043C SLT2Q00772 484 aa4.02□□□□□ -1.77
PTA1YAL043C SED5Q01590 340 aa4.02□□□□□ -1.77
PTA1YAL043C NUP100Q02629 959 aa4.02□□□□□ -1.77
PTA1YAL043C RAD30Q04049 632 aa4.02□□□□□ -1.77
PTA1YAL043C COA4Q05809 96 aa4.02□□□□□ -1.77
PTA1YAL043C THP3Q12049 470 aaKnown RBP4.02□□□□□ -1.77
PTA1YAL043C GET4Q12125 312 aa4.02□□□□□ -1.77
PTA1YAL043C YRM1Q12340 786 aa4.02□□□□□ -1.77
PTA1YAL043C ECM29P38737 1868 aa4.01□□□□□ -1.77
PTA1YAL043C MSS18P08593 268 aa4.01□□□□□ -1.77
PTA1YAL043C AMD2P22580 549 aa4.01□□□□□ -1.77
PTA1YAL043C POL4P25615 582 aa4.01□□□□□ -1.77
PTA1YAL043C MRPL9P31334 269 aa4.01□□□□□ -1.77
PTA1YAL043C CDC5P32562 705 aa4.01□□□□□ -1.77
PTA1YAL043C SSE2P32590 693 aaKnown RBP4.01□□□□□ -1.77
PTA1YAL043C GDH2P33327 1092 aaKnown RBP4.01□□□□□ -1.77
PTA1YAL043C GPT2P36148 743 aa4.01□□□□□ -1.77
PTA1YAL043C YHR078WP38799 552 aa4.01□□□□□ -1.77
PTA1YAL043C BOL3P39724 118 aa4.01□□□□□ -1.77
PTA1YAL043C MTW1P39731 289 aa4.01□□□□□ -1.77
PTA1YAL043C PEX31P53203 462 aa4.01□□□□□ -1.77
PTA1YAL043C CLD1P53264 445 aa4.01□□□□□ -1.77
PTA1YAL043C ADE12P80210 433 aaKnown RBP4.01□□□□□ -1.77
PTA1YAL043C GAS3Q03655 524 aa4.01□□□□□ -1.77
PTA1YAL043C ENT5Q03769 411 aaKnown RBP4.01□□□□□ -1.77
PTA1YAL043C RSM24Q03976 319 aa4.01□□□□□ -1.77
PTA1YAL043C TRM12Q04235 462 aa4.01□□□□□ -1.77
PTA1YAL043C APC4Q04601 652 aa4.01□□□□□ -1.77
PTA1YAL043C YPQ2Q06328 317 aa4.01□□□□□ -1.77
PTA1YAL043C PGC1Q08959 321 aa4.01□□□□□ -1.77
PTA1YAL043C FLC1Q08967 793 aa4.01□□□□□ -1.77
PTA1YAL043C VIK1Q12045 647 aa4.01□□□□□ -1.77
PTA1YAL043C YOR131CQ12486 218 aa4.01□□□□□ -1.77
PTA1YAL043C FRT1Q99332 602 aa4.01□□□□□ -1.77
PTA1YAL043C LAA1P39526 2014 aa4.01□□□□□ -1.77
PTA1YAL043C RAS2P01120 322 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C GAL80P04387 435 aa4□□□□□ -1.77
PTA1YAL043C HVG1P0CE11 249 aa4□□□□□ -1.77
PTA1YAL043C INO1P11986 533 aa4□□□□□ -1.77
PTA1YAL043C ADE2P21264 571 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C DUR3P33413 735 aa4□□□□□ -1.77
PTA1YAL043C UTP11P34247 250 aaPredicted RBP4□□□□□ -1.77
PTA1YAL043C MAC1P35192 417 aa4□□□□□ -1.77
PTA1YAL043C FUI1P38196 639 aa4□□□□□ -1.77
PTA1YAL043C YHL026CP38740 315 aa4□□□□□ -1.77
PTA1YAL043C RGI1P40043 161 aaPredicted RBP4□□□□□ -1.77
PTA1YAL043C PAN6P40459 309 aa4□□□□□ -1.77
PTA1YAL043C MSS2P40990 351 aa4□□□□□ -1.77
PTA1YAL043C SWP82P43554 623 aa4□□□□□ -1.77
PTA1YAL043C HXT16P47185 567 aa4□□□□□ -1.77
PTA1YAL043C GTR2P53290 341 aa4□□□□□ -1.77
PTA1YAL043C COQ6P53318 479 aa4□□□□□ -1.77
PTA1YAL043C IBD2P53892 351 aa4□□□□□ -1.77
PTA1YAL043C YNL108CP53929 270 aa4□□□□□ -1.77
PTA1YAL043C PRP38Q00723 242 aaPredicted RBP4□□□□□ -1.77
PTA1YAL043C RSN1Q03516 953 aa4□□□□□ -1.77
PTA1YAL043C YDR239CQ03780 787 aa4□□□□□ -1.77
PTA1YAL043C SSQ1Q05931 657 aaPredicted RBP4□□□□□ -1.77
PTA1YAL043C GPI11Q06636 219 aa4□□□□□ -1.77
PTA1YAL043C YLR125WQ12138 136 aa4□□□□□ -1.77
PTA1YAL043C SAS5Q99314 248 aa4□□□□□ -1.77
PTA1YAL043C HEM2P05373 342 aa4□□□□□ -1.77
PTA1YAL043C PET494P07390 489 aaPredicted RBP4□□□□□ -1.77
PTA1YAL043C RAP1P11938 827 aa4□□□□□ -1.77
PTA1YAL043C STE6P12866 1290 aa4□□□□□ -1.77
PTA1YAL043C HNM1P19807 563 aa4□□□□□ -1.77
PTA1YAL043C UBA1P22515 1024 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C GAR1P28007 205 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C ARP2P32381 391 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C SMI1P32566 505 aa4□□□□□ -1.77
PTA1YAL043C STE14P32584 239 aa4□□□□□ -1.77
PTA1YAL043C KTR4P38131 464 aa4□□□□□ -1.77
PTA1YAL043C IST2P38250 946 aa4□□□□□ -1.77
PTA1YAL043C RGI2P40188 164 aa4□□□□□ -1.77
PTA1YAL043C SNG1P46950 547 aa4□□□□□ -1.77
PTA1YAL043C YJL132WP47014 750 aa4□□□□□ -1.77
PTA1YAL043C YJR107WP47145 328 aa4□□□□□ -1.77
PTA1YAL043C YJR115WP47152 169 aa4□□□□□ -1.77
PTA1YAL043C NOP13P53883 403 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PTA1YAL043C CIK1Q01649 594 aa4□□□□□ -1.77
PTA1YAL043C ECM9Q02202 377 aa4□□□□□ -1.77
PTA1YAL043C RAD33Q04231 177 aa4□□□□□ -1.77
PTA1YAL043C VTA1Q06263 330 aa4□□□□□ -1.77
PTA1YAL043C HBT1Q07653 1046 aaKnown RBP4□□□□□ -1.77
PTA1YAL043C RPN6Q12377 434 aa4□□□□□ -1.77
PTA1YAL043C ATP4P05626 244 aa3.99□□□□□ -1.77
PTA1YAL043C LEU1P07264 779 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C HOM3P10869 527 aa3.99□□□□□ -1.77
PTA1YAL043C UGA1P17649 471 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms