RNA–Protein interactions for RNA: YPL053C

KTR6, Transcript of Probable mannosylphosphate transferase, yeast

Gene KTR6, Length 1,341 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTR6	YPL053C	SPE2	P21182	396 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	STE50	P25344	346 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	RPC53	P25441	422 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	SSE2	P32590	693 aa	Known RBP	4.09	□□□□□ -1.75
KTR6	YPL053C	SEF1	P34228	1148 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	VID24	P38263	362 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	SMF1	P38925	575 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	YMR124W	P39523	943 aa	Known RBP	4.09	□□□□□ -1.75
KTR6	YPL053C	ELO1	P39540	310 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	DOT5	P40553	215 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
KTR6	YPL053C	MAF1	P41910	395 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	FAR3	P46671	204 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	YGR127W	P53275	312 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	YGR250C	P53316	781 aa	Known RBP	4.09	□□□□□ -1.75
KTR6	YPL053C	YTP1	P53584	459 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	BOP3	P53958	396 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	ASI1	P54074	624 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	YMR178W	Q03219	274 aa	Known RBP	4.09	□□□□□ -1.75
KTR6	YPL053C	AFT2	Q08957	416 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	RIM20	Q12033	661 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	YLR112W	Q12130	139 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	LEU9	Q12166	604 aa	Known RBP	4.09	□□□□□ -1.75
KTR6	YPL053C	AVL9	Q12500	764 aa		4.09	□□□□□ -1.75
KTR6	YPL053C	MYO2	P19524	1574 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	YPR089W	O13585	888 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	PDX1	P16451	410 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	PUP3	P25451	205 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	GPI10	P30777	616 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	SAC1	P32368	623 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	VMA8	P32610	256 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	TCD2	P36101	447 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	CST26	P38226	397 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	OPY1	P38271	328 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	ALG5	P40350	334 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	APT1	P49435	187 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	RPL15B	P54780	204 aa	Predicted RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	DPB4	Q04603	196 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	ETT1	Q08421	412 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	APL4	Q12028	832 aa		4.08	□□□□□ -1.76
KTR6	YPL053C	CFT1	Q06632	1357 aa	Known RBP	4.08	□□□□□ -1.76
KTR6	YPL053C	SRB8	P25648	1427 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	KGD1	P20967	1014 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	IMG1	P25626	169 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	TIF3	P34167	436 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	YBR144C	P34215	104 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	TOM71	P38825	639 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	VRG4	P40107	337 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	RPS0B	P46654	252 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	PET130	P47065	347 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	IMD4	P50094	524 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	VTC3	Q02725	835 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	FIN1	Q03898	291 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	MRD1	Q06106	887 aa	Known RBP	4.07	□□□□□ -1.76
KTR6	YPL053C	RTT109	Q07794	436 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	ATX2	Q12067	313 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	ATG29	Q12092	213 aa		4.07	□□□□□ -1.76
KTR6	YPL053C	BUD4	P47136	1447 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	STU1	P38198	1513 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	TY1B-DR4	Q07793	1604 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	GAL80	P04387	435 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	KRS1	P15180	591 aa	Known RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	CLB2	P24869	491 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	SYN8	P31377	255 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	WBP1	P33767	430 aa	Known RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	YBL055C	P34220	418 aa	Predicted RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	PXA2	P34230	853 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	NUP133	P36161	1157 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	RFC1	P38630	861 aa	Known RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	PCI8	P40512	444 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	YIR016W	P40572	265 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	SNM1	P40993	198 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	GAT1	P43574	510 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	RSC1	P53236	928 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	CWC22	P53333	577 aa	Known RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	POS5	Q06892	414 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	RIP-Chip
KTR6	YPL053C	RLM1	Q12224	676 aa		4.06	□□□□□ -1.76
KTR6	YPL053C	YLR419W	Q06698	1435 aa	Known RBP	4.06	□□□□□ -1.76
KTR6	YPL053C	RPL42A	P0CX27	106 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	RPL42B	P0CX28	106 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	HOM3	P10869	527 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	MRP13	P12686	339 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	PDA1	P16387	420 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	AIM17	P23180	465 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	CLB3	P24870	427 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	PRD1	P25375	712 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	BOS1	P25385	244 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	DBF4	P32325	704 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	MRE11	P32829	692 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	STV1	P37296	890 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	SRP72	P38688	640 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	DBP8	P38719	431 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	GND1	P38720	489 aa	Known RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	PTR3	P43606	678 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	HOS2	P53096	452 aa	Predicted RBP	4.05	□□□□□ -1.76
KTR6	YPL053C	SGF73	P53165	657 aa		4.05	□□□□□ -1.76
KTR6	YPL053C	ERG26	P53199	349 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms