RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeast

Gene SSU72, Length 621 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU72	YNL222W	VIP1	Q06685	1146 aa	Known RBP	4.22	□□□□□ -1.73
SSU72	YNL222W	TEN1	Q07921	160 aa		4.22	□□□□□ -1.73
SSU72	YNL222W	TYR1	P20049	452 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	RPS2	P25443	254 aa	Known RBP	4.21	□□□□□ -1.74
SSU72	YNL222W	RTS1	P38903	757 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	KRE9	P39005	276 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	RAD30	Q04049	632 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	SSK1	Q07084	712 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	SSP2	Q08646	371 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	LEU9	Q12166	604 aa	Known RBP	4.21	□□□□□ -1.74
SSU72	YNL222W	ARP6	Q12509	438 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	YBR298C-A	Q8TGK4	73 aa		4.21	□□□□□ -1.74
SSU72	YNL222W	SNC1	P31109	117 aa		4.2	□□□□□ -1.74
SSU72	YNL222W	ERG26	P53199	349 aa	Known RBP	4.2	□□□□□ -1.74
SSU72	YNL222W	RTS3	P53289	263 aa		4.2	□□□□□ -1.74
SSU72	YNL222W	YVH1	Q02256	364 aa	Known RBP	4.2	□□□□□ -1.74
SSU72	YNL222W	YMR160W	Q03823	816 aa		4.2	□□□□□ -1.74
SSU72	YNL222W	DPB4	Q04603	196 aa	Known RBP	4.2	□□□□□ -1.74
SSU72	YNL222W	PDH1	Q12428	516 aa	Known RBP	4.2	□□□□□ -1.74
SSU72	YNL222W	ADH7	P25377	361 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	MAL33	P38157	468 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	DPH1	P40487	425 aa	Known RBP	4.19	□□□□□ -1.74
SSU72	YNL222W	IKS1	P47042	667 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	YPL014W	Q02606	381 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	YEH2	Q07950	538 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	TCO89	Q08921	799 aa		4.19	□□□□□ -1.74
SSU72	YNL222W	FUM1	P08417	488 aa	Known RBP	4.18	□□□□□ -1.74
SSU72	YNL222W	PRP16	P15938	1071 aa	Predicted RBP	4.18	□□□□□ -1.74
SSU72	YNL222W	SYN8	P31377	255 aa		4.18	□□□□□ -1.74
SSU72	YNL222W	LAG1	P38703	411 aa		4.18	□□□□□ -1.74
SSU72	YNL222W	ARC1	P46672	376 aa	Known RBP	4.18	□□□□□ -1.74
SSU72	YNL222W	SMM1	P53720	384 aa	Known RBP	4.18	□□□□□ -1.74
SSU72	YNL222W	BSC5	P53755	489 aa		4.18	□□□□□ -1.74
SSU72	YNL222W	IMP4	P53941	290 aa	Known RBP	4.18	□□□□□ -1.74
SSU72	YNL222W	YMR087W	Q04299	284 aa		4.18	□□□□□ -1.74
SSU72	YNL222W	SKM1	Q12469	655 aa		4.18	□□□□□ -1.74
SSU72	YNL222W	CDC24	P11433	854 aa	Predicted RBP	4.17	□□□□□ -1.74
SSU72	YNL222W	TRX2	P22803	104 aa	Known RBP	4.17	□□□□□ -1.74
SSU72	YNL222W	CMK1	P27466	446 aa	Known RBP	4.17	□□□□□ -1.74
SSU72	YNL222W	MTR2	P34232	184 aa	Known RBP	4.17	□□□□□ -1.74
SSU72	YNL222W	AGP2	P38090	596 aa		4.17	□□□□□ -1.74
SSU72	YNL222W	DUG3	P53871	357 aa		4.17	□□□□□ -1.74
SSU72	YNL222W	YSA1	Q01976	231 aa		4.17	□□□□□ -1.74
SSU72	YNL222W	PPT2	Q12036	173 aa		4.17	□□□□□ -1.74
SSU72	YNL222W	KGD1	P20967	1014 aa	Known RBP	4.16	□□□□□ -1.74
SSU72	YNL222W	SEC62	P21825	274 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	SGV1	P23293	657 aa	Known RBP	4.16	□□□□□ -1.74
SSU72	YNL222W	RER1	P25560	188 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	ECM15	P35195	104 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	YGL082W	P53155	381 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	SAM50	P53969	484 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	THI20	Q08224	551 aa		4.16	□□□□□ -1.74
SSU72	YNL222W	RPL15A	P05748	204 aa	Known RBP	4.15	□□□□□ -1.75
SSU72	YNL222W	ARD1	P07347	238 aa	Predicted RBP	4.15	□□□□□ -1.75
SSU72	YNL222W	PRE8	P23639	250 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	ATS1	P31386	333 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	VPS17	P32913	551 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	YKL100C	P34248	587 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	MDM31	P38880	579 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	PTR3	P43606	678 aa		4.15	□□□□□ -1.75
SSU72	YNL222W	BUD5	P25300	642 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU72	YNL222W	LOS1	P33418	1100 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU72	YNL222W	YBL055C	P34220	418 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU72	YNL222W	NUP133	P36161	1157 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	YHR218W	P38899	603 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	LYS14	P40971	790 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	ROK1	P45818	564 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU72	YNL222W	EFM6	P53970	246 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	RHO4	Q00246	291 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	HCR1	Q05775	265 aa	Known RBP	4.14	□□□□□ -1.75
SSU72	YNL222W	CDC45	Q08032	650 aa		4.14	□□□□□ -1.75
SSU72	YNL222W	CYB2	P00175	591 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	PUP3	P25451	205 aa	Known RBP	4.13	□□□□□ -1.75
SSU72	YNL222W	IMG1	P25626	169 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	CPR3	P25719	182 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	BUD14	P27637	709 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	NDC1	P32500	655 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	SIP2	P34164	415 aa	Known RBP	4.13	□□□□□ -1.75
SSU72	YNL222W	YNK1	P36010	153 aa	Known RBP	4.13	□□□□□ -1.75
SSU72	YNL222W	AUR1	P36107	401 aa	Predicted RBP	4.13	□□□□□ -1.75
SSU72	YNL222W	YTA12	P40341	825 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	SNG1	P46950	547 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	MEP3	P53390	489 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	RPM2	Q02773	1202 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	MSC1	Q03104	513 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	YML037C	Q03703	340 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	YMR018W	Q04364	514 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	YPL272C	Q08984	517 aa		4.13	□□□□□ -1.75
SSU72	YNL222W	RPL19A	P0CX82	189 aa	Known RBP	4.12	□□□□□ -1.75
SSU72	YNL222W	RPL19B	P0CX83	189 aa	Predicted RBP	4.12	□□□□□ -1.75
SSU72	YNL222W	KAR3	P17119	729 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	BOS1	P25385	244 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	AGA1	P32323	725 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	PTR2	P32901	601 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	YOX1	P34161	385 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	ICS2	P38284	255 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	VPS52	P39904	641 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	FAR3	P46671	204 aa		4.12	□□□□□ -1.75
SSU72	YNL222W	RTT101	P47050	842 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms