RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	YLR346C	Q06139	101 aa		4.1	□□□□□ -1.75
YSH1	YLR277C	NUT2	Q06213	157 aa		4.1	□□□□□ -1.75
YSH1	YLR277C	LUC7	Q07508	261 aa	Predicted RBP	4.1	□□□□□ -1.75
YSH1	YLR277C	AIM41	Q12032	185 aa		4.1	□□□□□ -1.75
YSH1	YLR277C	SRO7	Q12038	1033 aa		4.1	□□□□□ -1.75
YSH1	YLR277C	PUS9	Q12069	462 aa		4.1	□□□□□ -1.75
YSH1	YLR277C	REV3	P14284	1504 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	GAL4	P04386	881 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	RPL25	P04456	142 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	CHO2	P05374	869 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	TUB1	P09733	447 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	ERR1	P0CX10	437 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	ERR2	P0CX11	437 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	PYC1	P11154	1178 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	AAC3	P18238	307 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	ACH1	P32316	526 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	TFC1	P32367	649 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	SUA5	P32579	426 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	SRP101	P32916	621 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	SPO23	P33757	523 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	YBL086C	P38177	466 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	MSC7	P38694	644 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	FAA3	P39002	694 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	NPT1	P39683	429 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	SEN34	P39707	275 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	SER3	P40054	469 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	FET4	P40988	552 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	GAB1	P41733	394 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	TFG2	P41896	400 aa	Predicted RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	TRS85	P46944	698 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	YJL016W	P47072	561 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	JHD2	P47156	728 aa	Predicted RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	ASK10	P48361	1146 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	PUS4	P48567	403 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	SLI1	P53304	468 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	CPR6	P53691	371 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	BOP3	P53958	396 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YSH1	YLR277C	YDR248C	Q03786	193 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	BUD22	Q04347	519 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	HRQ1	Q05549	1077 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	FAR10	Q06001	478 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	BCP1	Q06338	283 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	RSB1	Q08417	382 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	SKI7	Q08491	747 aa	Predicted RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YSH1	YLR277C	TMA46	Q12000	345 aa	Known RBP	4.09	□□□□□ -1.75
YSH1	YLR277C	ISN1	Q99312	450 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	NUP159	P40477	1460 aa		4.09	□□□□□ -1.75
YSH1	YLR277C	PUT2	P07275	575 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	HPR1	P17629	752 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	CLB2	P24869	491 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	CNB1	P25296	175 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	DAL3	P32459	195 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	GSH1	P32477	678 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	TCA17	P32613	152 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	VAM7	P32912	316 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	RCK2	P38623	610 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	URA8	P38627	578 aa	Predicted RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	RRP3	P38712	501 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	MMF1	P40185	145 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	INP51	P40559	946 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	ERR3	P42222	437 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	MSE1	P48525	536 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	PSP1	P50896	841 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	TIM21	P53220	239 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	YGR125W	P53273	1036 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	DBP6	P53734	629 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	ATP25	Q03153	612 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	ULA1	Q12059	462 aa		4.09	□□□□□ -1.76
YSH1	YLR277C	PDR5	P33302	1511 aa	Known RBP	4.09	□□□□□ -1.76
YSH1	YLR277C	RPO41	P13433	1351 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	MLP2	P40457	1679 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	VPS15	P22219	1454 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	MET17	P06106	444 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	ARG82	P07250	355 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	FBA1	P14540	359 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	HXT2	P23585	541 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	CMK1	P27466	446 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	DBF4	P32325	704 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	BEM3	P32873	1128 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	PDR3	P33200	976 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	NIC96	P34077	839 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	YBL055C	P34220	418 aa	Predicted RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	POA1	P38218	177 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	TSC10	P38342	320 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	MGE1	P38523	228 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	RSP5	P39940	809 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	IRC7	P43623	340 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	FMP33	P46998	180 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	IBA57	P47158	497 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	IMP4	P53941	290 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	ALO1	P54783	526 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	SMA1	Q02651	245 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	YMR279C	Q03263	540 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	PAL1	Q05518	499 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	HDA3	Q06623	655 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	CDA2	Q06703	312 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	GPI13	Q07830	1017 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms