RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W GPP2P40106 250 aaKnown RBP4.43□□□□□ -1.7
SSH4YKL124W RGI2P40188 164 aa4.43□□□□□ -1.7
SSH4YKL124W YIL108WP40483 696 aaKnown RBP4.43□□□□□ -1.7
SSH4YKL124W NBP35P52920 328 aa4.43□□□□□ -1.7
SSH4YKL124W SAP4P53036 818 aa4.43□□□□□ -1.7
SSH4YKL124W RTA1P53047 317 aa4.43□□□□□ -1.7
SSH4YKL124W SUN4P53616 420 aa4.43□□□□□ -1.7
SSH4YKL124W VAC7P53950 1165 aa4.43□□□□□ -1.7
SSH4YKL124W YAT1P80235 687 aa4.43□□□□□ -1.7
SSH4YKL124W NUP100Q02629 959 aa4.43□□□□□ -1.7
SSH4YKL124W CCE1Q03702 353 aa4.43□□□□□ -1.7
SSH4YKL124W YMR111CQ04461 462 aaPredicted RBP4.43□□□□□ -1.7
SSH4YKL124W MDM36Q06820 579 aa4.43□□□□□ -1.7
SSH4YKL124W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SSH4YKL124W CUE5Q08412 411 aaKnown RBP4.43□□□□□ -1.7
SSH4YKL124W SMF3Q12078 473 aaPredicted RBP4.43□□□□□ -1.7
SSH4YKL124W YRM1Q12340 786 aa4.43□□□□□ -1.7
SSH4YKL124W STF1P01098 86 aa4.42□□□□□ -1.7
SSH4YKL124W FUR4P05316 633 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W RPB2P08518 1224 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W ILS1P09436 1072 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W YML002WP0CF17 737 aa4.42□□□□□ -1.7
SSH4YKL124W CDC24P11433 854 aaPredicted RBP4.42□□□□□ -1.7
SSH4YKL124W GLN4P13188 809 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W EPT1P22140 391 aa4.42□□□□□ -1.7
SSH4YKL124W LDB7P38210 180 aa4.42□□□□□ -1.7
SSH4YKL124W POP4P38336 279 aa4.42□□□□□ -1.7
SSH4YKL124W DBP8P38719 431 aa4.42□□□□□ -1.7
SSH4YKL124W YPS6P40583 537 aa4.42□□□□□ -1.7
SSH4YKL124W RNR4P49723 345 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W CPR6P53691 371 aaKnown RBP4.42□□□□□ -1.7
SSH4YKL124W NOP15P53927 220 aaPredicted RBP4.42□□□□□ -1.7
SSH4YKL124W REG1Q00816 1014 aa4.42□□□□□ -1.7
SSH4YKL124W YKU80Q04437 629 aa4.42□□□□□ -1.7
SSH4YKL124W ARR2Q06597 130 aa4.42□□□□□ -1.7
SSH4YKL124W BUD7Q08754 746 aa4.42□□□□□ -1.7
SSH4YKL124W GLE1Q12315 538 aa4.42□□□□□ -1.7
SSH4YKL124W YIL002W-AQ3E7Z5 69 aa4.42□□□□□ -1.7
SSH4YKL124W CUP1-1P0CX80 61 aa4.41□□□□□ -1.7
SSH4YKL124W CUP1-2P0CX81 61 aa4.41□□□□□ -1.7
SSH4YKL124W HMG1P12683 1054 aa4.41□□□□□ -1.7
SSH4YKL124W RFA2P26754 273 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W PAP1P29468 568 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W LYP1P32487 611 aa4.41□□□□□ -1.7
SSH4YKL124W ORC2P32833 620 aa4.41□□□□□ -1.7
SSH4YKL124W KES1P35844 434 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W MAK5P38112 773 aaPredicted RBP4.41□□□□□ -1.7
SSH4YKL124W SMF2P38778 549 aa4.41□□□□□ -1.7
SSH4YKL124W TIM17P39515 158 aa4.41□□□□□ -1.7
SSH4YKL124W ELO1P39540 310 aa4.41□□□□□ -1.7
SSH4YKL124W YER158CP40095 573 aa4.41□□□□□ -1.7
SSH4YKL124W BIR1P47134 954 aa4.41□□□□□ -1.7
SSH4YKL124W YAP1802P53309 568 aa4.41□□□□□ -1.7
SSH4YKL124W YGR250CP53316 781 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W PET117Q02771 107 aa4.41□□□□□ -1.7
SSH4YKL124W YMR160WQ03823 816 aa4.41□□□□□ -1.7
SSH4YKL124W TAF11Q04226 346 aa4.41□□□□□ -1.7
SSH4YKL124W YML096WQ04489 525 aa4.41□□□□□ -1.7
SSH4YKL124W ARG7Q04728 441 aa4.41□□□□□ -1.7
SSH4YKL124W BLS1Q06071 122 aa4.41□□□□□ -1.7
SSH4YKL124W GIC2Q06648 383 aa4.41□□□□□ -1.7
SSH4YKL124W YPR089WO13585 888 aa4.41□□□□□ -1.7
SSH4YKL124W SEM1O94742 89 aa4.41□□□□□ -1.7
SSH4YKL124W CPA1P07258 411 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W TRM1P15565 570 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W SNF5P18480 905 aa4.41□□□□□ -1.7
SSH4YKL124W HSP60P19882 572 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W SCL1P21243 252 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W SAN1P22470 610 aa4.41□□□□□ -1.7
SSH4YKL124W SPR1P32603 445 aa4.41□□□□□ -1.7
SSH4YKL124W YEL043WP32618 956 aa4.41□□□□□ -1.7
SSH4YKL124W GCG1P32656 232 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W STB6P36085 766 aa4.41□□□□□ -1.7
SSH4YKL124W MRP21P38175 177 aa4.41□□□□□ -1.7
SSH4YKL124W YSW1P38280 609 aa4.41□□□□□ -1.7
SSH4YKL124W VHC1P38329 1120 aa4.41□□□□□ -1.7
SSH4YKL124W YBR259WP38338 688 aa4.41□□□□□ -1.7
SSH4YKL124W GND1P38720 489 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W CYC2P38909 366 aa4.41□□□□□ -1.7
SSH4YKL124W SMF1P38925 575 aa4.41□□□□□ -1.7
SSH4YKL124W UME6P39001 836 aa4.41□□□□□ -1.7
SSH4YKL124W LTP1P40347 161 aa4.41□□□□□ -1.7
SSH4YKL124W UTP18P40362 594 aaPredicted RBP4.41□□□□□ -1.7
SSH4YKL124W NDC80P40460 691 aa4.41□□□□□ -1.7
SSH4YKL124W IME4P41833 600 aa4.41□□□□□ -1.7
SSH4YKL124W TES1P41903 349 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W PXA1P41909 870 aa4.41□□□□□ -1.7
SSH4YKL124W DUG1P43616 481 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W UPF3P48412 387 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W SAM37P50110 327 aa4.41□□□□□ -1.7
SSH4YKL124W ROM1P53046 1155 aa4.41□□□□□ -1.7
SSH4YKL124W NAM8Q00539 523 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SSH4YKL124W UTP6Q02354 440 aaKnown RBP4.41□□□□□ -1.7
SSH4YKL124W YDR109CQ04585 715 aa4.41□□□□□ -1.7
SSH4YKL124W GAD1Q04792 585 aa4.41□□□□□ -1.7
SSH4YKL124W BNA5Q05979 453 aa4.41□□□□□ -1.7
SSH4YKL124W PHO92Q06390 306 aa4.41□□□□□ -1.7
SSH4YKL124W BRE4Q07660 1125 aa4.41□□□□□ -1.7
SSH4YKL124W PLB3Q08108 686 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms