RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeast

Gene SEC28, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC28	YIL076W	YNG2	P38806	282 aa	Known RBP	4.12	□□□□□ -1.75
SEC28	YIL076W	DIA3	P52290	468 aa		4.12	□□□□□ -1.75
SEC28	YIL076W	RTT109	Q07794	436 aa		4.12	□□□□□ -1.75
SEC28	YIL076W	PDH1	Q12428	516 aa	Known RBP	4.12	□□□□□ -1.75
SEC28	YIL076W	YOL087C	Q99247	1116 aa		4.12	□□□□□ -1.75
SEC28	YIL076W	LOS1	P33418	1100 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC28	YIL076W	AAD10	P47182	288 aa		4.11	□□□□□ -1.75
SEC28	YIL076W	YVH1	Q02256	364 aa	Known RBP	4.11	□□□□□ -1.75
SEC28	YIL076W	YMR160W	Q03823	816 aa		4.11	□□□□□ -1.75
SEC28	YIL076W	HCR1	Q05775	265 aa	Known RBP	4.11	□□□□□ -1.75
SEC28	YIL076W	ECM30	Q06673	1274 aa		4.11	□□□□□ -1.75
SEC28	YIL076W	RIX7	Q07844	837 aa	Known RBP	4.11	□□□□□ -1.75
SEC28	YIL076W	RPL15A	P05748	204 aa	Known RBP	4.1	□□□□□ -1.75
SEC28	YIL076W	CMK1	P27466	446 aa	Known RBP	4.1	□□□□□ -1.75
SEC28	YIL076W	CBF2	P32504	956 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	ECM15	P35195	104 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	LAG1	P38703	411 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	YGL082W	P53155	381 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	RSM23	Q01163	450 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	YPL014W	Q02606	381 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	YMR087W	Q04299	284 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	THI20	Q08224	551 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	RSA1	Q08932	381 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	NBP2	Q12163	236 aa		4.1	□□□□□ -1.75
SEC28	YIL076W	LEU9	Q12166	604 aa	Known RBP	4.1	□□□□□ -1.75
SEC28	YIL076W	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	VMA16	P23968	213 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	ATS1	P31386	333 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	KAP123	P40069	1113 aa	Known RBP	4.09	□□□□□ -1.75
SEC28	YIL076W	YTA12	P40341	825 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	YDL186W	P48568	277 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	ERG26	P53199	349 aa	Known RBP	4.09	□□□□□ -1.75
SEC28	YIL076W	SAM50	P53969	484 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	RPM2	Q02773	1202 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	ENT4	Q07872	247 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	TEN1	Q07921	160 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	TLG2	Q08144	397 aa		4.09	□□□□□ -1.75
SEC28	YIL076W	GDH1	P07262	454 aa	Known RBP	4.08	□□□□□ -1.76
SEC28	YIL076W	VPS17	P32913	551 aa		4.08	□□□□□ -1.76
SEC28	YIL076W	RTT101	P47050	842 aa		4.08	□□□□□ -1.76
SEC28	YIL076W	SMM1	P53720	384 aa	Known RBP	4.08	□□□□□ -1.76
SEC28	YIL076W	DPB4	Q04603	196 aa	Known RBP	4.08	□□□□□ -1.76
SEC28	YIL076W	CDC45	Q08032	650 aa		4.08	□□□□□ -1.76
SEC28	YIL076W	ADH7	P25377	361 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	AGA1	P32323	725 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	NDC1	P32500	655 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	YNK1	P36010	153 aa	Known RBP	4.07	□□□□□ -1.76
SEC28	YIL076W	RPH1	P39956	796 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	YJL213W	P40896	331 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	SET6	Q12529	373 aa		4.07	□□□□□ -1.76
SEC28	YIL076W	MTF1	P14908	341 aa	Known RBP	4.06	□□□□□ -1.76
SEC28	YIL076W	PTR2	P32901	601 aa		4.06	□□□□□ -1.76
SEC28	YIL076W	SIP2	P34164	415 aa	Known RBP	4.06	□□□□□ -1.76
SEC28	YIL076W	MTR2	P34232	184 aa	Known RBP	4.06	□□□□□ -1.76
SEC28	YIL076W	AVT5	P38176	459 aa		4.06	□□□□□ -1.76
SEC28	YIL076W	RPR2	P40571	144 aa		4.06	□□□□□ -1.76
SEC28	YIL076W	LYS4	P49367	693 aa	Predicted RBP	4.06	□□□□□ -1.76
SEC28	YIL076W	CBK1	P53894	756 aa		4.06	□□□□□ -1.76
SEC28	YIL076W	RHO4	Q00246	291 aa		4.06	□□□□□ -1.76
SEC28	YIL076W	CBS2	P14905	389 aa		4.05	□□□□□ -1.76
SEC28	YIL076W	SGV1	P23293	657 aa	Known RBP	4.05	□□□□□ -1.76
SEC28	YIL076W	SYN8	P31377	255 aa		4.05	□□□□□ -1.76
SEC28	YIL076W	YFR016C	P43597	1233 aa	Known RBP	4.05	□□□□□ -1.76
SEC28	YIL076W	SIP4	P46954	829 aa		4.05	□□□□□ -1.76
SEC28	YIL076W	DUG3	P53871	357 aa		4.05	□□□□□ -1.76
SEC28	YIL076W	ERP1	Q05359	219 aa	Known RBP	4.05	□□□□□ -1.76
SEC28	YIL076W	TCO89	Q08921	799 aa		4.05	□□□□□ -1.76
SEC28	YIL076W	MCK1	P21965	375 aa	Known RBP	4.04	□□□□□ -1.76
SEC28	YIL076W	SAN1	P22470	610 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	YKL100C	P34248	587 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	RRN3	P36070	627 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	AGP2	P38090	596 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	VPS52	P39904	641 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	COS10	P52924	374 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	BOR1	P53838	576 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	RAD30	Q04049	632 aa		4.04	□□□□□ -1.76
SEC28	YIL076W	VMS1	Q04311	632 aa	Known RBP	4.04	□□□□□ -1.76
SEC28	YIL076W	VIP1	Q06685	1146 aa	Known RBP	4.04	□□□□□ -1.76
SEC28	YIL076W	ETT1	Q08421	412 aa	Known RBP	4.04	□□□□□ -1.76
SEC28	YIL076W	KGD1	P20967	1014 aa	Known RBP	4.03	□□□□□ -1.76
SEC28	YIL076W	BUD5	P25300	642 aa	Predicted RBP	4.03	□□□□□ -1.76
SEC28	YIL076W	SPC110	P32380	944 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	MAL33	P38157	468 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	MTC4	P38335	694 aa	Known RBP	4.03	□□□□□ -1.76
SEC28	YIL076W	PTR3	P43606	678 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	YML131W	Q03102	365 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	GLO2	Q05584	274 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	YLL056C	Q12177	298 aa		4.03	□□□□□ -1.76
SEC28	YIL076W	APE1	P14904	514 aa		4.02	□□□□□ -1.77
SEC28	YIL076W	YBL055C	P34220	418 aa	Predicted RBP	4.02	□□□□□ -1.77
SEC28	YIL076W	VPS24	P36095	224 aa	Known RBP	4.02	□□□□□ -1.77
SEC28	YIL076W	CSM2	P40465	213 aa		4.02	□□□□□ -1.77
SEC28	YIL076W	ARC1	P46672	376 aa	Known RBP	4.02	□□□□□ -1.77
SEC28	YIL076W	SNG1	P46950	547 aa		4.02	□□□□□ -1.77
SEC28	YIL076W	EFM6	P53970	246 aa		4.02	□□□□□ -1.77
SEC28	YIL076W	AYT1	Q12226	474 aa		4.02	□□□□□ -1.77
SEC28	YIL076W	CDC24	P11433	854 aa	Predicted RBP	4.01	□□□□□ -1.77
SEC28	YIL076W	PUP3	P25451	205 aa	Known RBP	4.01	□□□□□ -1.77
SEC28	YIL076W	NUP133	P36161	1157 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms