RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR78, Length 87 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR78	snR78	TDA7	P53882	636 aa	Predicted RBP	4.95	□□□□□ -1.62
snR78	snR78	UBX4	P54730	416 aa		4.95	□□□□□ -1.62
snR78	snR78	ATG9	Q12142	997 aa		4.95	□□□□□ -1.62
snR78	snR78	YLR302C	O13544	120 aa		4.94	□□□□□ -1.62
snR78	snR78	SPE2	P21182	396 aa		4.94	□□□□□ -1.62
snR78	snR78	TEF4	P36008	412 aa	Known RBP	4.94	□□□□□ -1.62
snR78	snR78	SPC34	P36131	295 aa		4.94	□□□□□ -1.62
snR78	snR78	RTS1	P38903	757 aa		4.94	□□□□□ -1.62
snR78	snR78	YNR061C	P53747	219 aa		4.94	□□□□□ -1.62
snR78	snR78	ADE13	Q05911	482 aa	Known RBP	4.94	□□□□□ -1.62
snR78	snR78	YEH2	Q07950	538 aa		4.94	□□□□□ -1.62
snR78	snR78	RSA1	Q08932	381 aa		4.94	□□□□□ -1.62
snR78	snR78	YBR085C-A	O43137	85 aa		4.93	□□□□□ -1.62
snR78	snR78	XRS2	P33301	854 aa		4.93	□□□□□ -1.62
snR78	snR78	ARP1	P38696	384 aa		4.93	□□□□□ -1.62
snR78	snR78	MDM31	P38880	579 aa		4.93	□□□□□ -1.62
snR78	snR78	YHR218W	P38899	603 aa		4.93	□□□□□ -1.62
snR78	snR78	UME6	P39001	836 aa		4.93	□□□□□ -1.62
snR78	snR78	PSD1	P39006	500 aa		4.93	□□□□□ -1.62
snR78	snR78	VPS4	P52917	437 aa		4.93	□□□□□ -1.62
snR78	snR78	STR3	P53101	465 aa	Known RBP	4.93	□□□□□ -1.62
snR78	snR78	FMP45	Q07651	309 aa		4.93	□□□□□ -1.62
snR78	snR78	PSK2	Q08217	1101 aa		4.93	□□□□□ -1.62
snR78	snR78	INP53	Q12271	1107 aa		4.93	□□□□□ -1.62
snR78	snR78	MRS3	P10566	314 aa		4.92	□□□□□ -1.62
snR78	snR78	PGS1	P25578	521 aa		4.92	□□□□□ -1.62
snR78	snR78	YER130C	P39959	443 aa		4.92	□□□□□ -1.62
snR78	snR78	RIC1	P40395	1056 aa		4.92	□□□□□ -1.62
snR78	snR78	SEC24	P40482	926 aa	Known RBP	4.92	□□□□□ -1.62
snR78	snR78	AXL1	P40851	1208 aa		4.92	□□□□□ -1.62
snR78	snR78	MSS11	Q03825	758 aa		4.92	□□□□□ -1.62
snR78	snR78	TFC6	Q06339	672 aa		4.92	□□□□□ -1.62
snR78	snR78	ARP6	Q12509	438 aa		4.92	□□□□□ -1.62
snR78	snR78	SNF3	P10870	884 aa		4.91	□□□□□ -1.62
snR78	snR78	ACH1	P32316	526 aa		4.91	□□□□□ -1.62
snR78	snR78	CNS1	P33313	385 aa		4.91	□□□□□ -1.62
snR78	snR78	UBA4	P38820	440 aa		4.91	□□□□□ -1.62
snR78	snR78	ANS1	P38832	159 aa		4.91	□□□□□ -1.62
snR78	snR78	SNU114	P36048	1008 aa	Known RBP	4.9	□□□□□ -1.63
snR78	snR78	UIP3	P39547	235 aa		4.9	□□□□□ -1.63
snR78	snR78	IKS1	P47042	667 aa		4.9	□□□□□ -1.63
snR78	snR78	DBF20	P32328	564 aa		4.89	□□□□□ -1.63
snR78	snR78	BUR6	P40096	142 aa		4.89	□□□□□ -1.63
snR78	snR78	RRT6	P53117	311 aa	Predicted RBP	4.89	□□□□□ -1.63
snR78	snR78	YGL082W	P53155	381 aa		4.89	□□□□□ -1.63
snR78	snR78	EMI2	Q04409	500 aa	Known RBP	4.89	□□□□□ -1.63
snR78	snR78	SNC1	P31109	117 aa		4.88	□□□□□ -1.63
snR78	snR78	MUB1	Q03162	620 aa		4.88	□□□□□ -1.63
snR78	snR78	RBA50	Q04418	439 aa		4.88	□□□□□ -1.63
snR78	snR78	SSK1	Q07084	712 aa		4.88	□□□□□ -1.63
snR78	snR78	PDH1	Q12428	516 aa	Known RBP	4.88	□□□□□ -1.63
snR78	snR78	TYR1	P20049	452 aa		4.87	□□□□□ -1.63
snR78	snR78	SAN1	P22470	610 aa		4.87	□□□□□ -1.63
snR78	snR78	YNK1	P36010	153 aa	Known RBP	4.87	□□□□□ -1.63
snR78	snR78	ROT2	P38138	954 aa		4.87	□□□□□ -1.63
snR78	snR78	DIA4	P38705	446 aa	Predicted RBP	4.87	□□□□□ -1.63
snR78	snR78	TRM8	Q12009	286 aa		4.87	□□□□□ -1.63
snR78	snR78	GDH1	P07262	454 aa	Known RBP	4.86	□□□□□ -1.63
snR78	snR78	CBS2	P14905	389 aa		4.86	□□□□□ -1.63
snR78	snR78	CMK1	P27466	446 aa	Known RBP	4.86	□□□□□ -1.63
snR78	snR78	SMA2	Q04658	369 aa		4.86	□□□□□ -1.63
snR78	snR78	HCR1	Q05775	265 aa	Known RBP	4.86	□□□□□ -1.63
snR78	snR78	NKP1	Q12493	238 aa		4.86	□□□□□ -1.63
snR78	snR78	ARG81	P05085	880 aa		4.85	□□□□□ -1.63
snR78	snR78	RPL15A	P05748	204 aa	Known RBP	4.85	□□□□□ -1.63
snR78	snR78	KTR3	P38130	404 aa	Predicted RBP	4.85	□□□□□ -1.63
snR78	snR78	DBP8	P38719	431 aa		4.85	□□□□□ -1.63
snR78	snR78	YTA12	P40341	825 aa		4.85	□□□□□ -1.63
snR78	snR78	YDL186W	P48568	277 aa		4.85	□□□□□ -1.63
snR78	snR78	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
snR78	snR78	TLG2	Q08144	397 aa		4.85	□□□□□ -1.63
snR78	snR78	VPS17	P32913	551 aa		4.84	□□□□□ -1.63
snR78	snR78	LOS1	P33418	1100 aa	Predicted RBP	4.84	□□□□□ -1.63
snR78	snR78	AVT5	P38176	459 aa		4.84	□□□□□ -1.63
snR78	snR78	SLZ1	P40167	298 aa		4.84	□□□□□ -1.63
snR78	snR78	SAM50	P53969	484 aa		4.84	□□□□□ -1.63
snR78	snR78	ZDS2	P54786	942 aa		4.84	□□□□□ -1.63
snR78	snR78	RPM2	Q02773	1202 aa		4.84	□□□□□ -1.63
snR78	snR78	INA17	Q02888	182 aa		4.84	□□□□□ -1.63
snR78	snR78	RCO1	Q04779	684 aa		4.84	□□□□□ -1.63
snR78	snR78	SSM4	P40318	1319 aa		4.83	□□□□□ -1.64
snR78	snR78	SNF1	P06782	633 aa	Known RBP	4.83	□□□□□ -1.64
snR78	snR78	RPB2	P08518	1224 aa	Known RBP	4.83	□□□□□ -1.64
snR78	snR78	SEC62	P21825	274 aa		4.83	□□□□□ -1.64
snR78	snR78	PTH2	P34222	208 aa		4.83	□□□□□ -1.64
snR78	snR78	TSC10	P38342	320 aa		4.83	□□□□□ -1.64
snR78	snR78	LAG1	P38703	411 aa		4.83	□□□□□ -1.64
snR78	snR78	RPH1	P39956	796 aa		4.83	□□□□□ -1.64
snR78	snR78	YJL213W	P40896	331 aa		4.83	□□□□□ -1.64
snR78	snR78	YFR016C	P43597	1233 aa	Known RBP	4.83	□□□□□ -1.64
snR78	snR78	RTT101	P47050	842 aa		4.83	□□□□□ -1.64
snR78	snR78	BNA1	P47096	177 aa		4.83	□□□□□ -1.64
snR78	snR78	SGM1	P47166	707 aa		4.83	□□□□□ -1.64
snR78	snR78	YMR160W	Q03823	816 aa		4.83	□□□□□ -1.64
snR78	snR78	ECM30	Q06673	1274 aa		4.83	□□□□□ -1.64
snR78	snR78	SET6	Q12529	373 aa		4.83	□□□□□ -1.64
snR78	snR78	PUT2	P07275	575 aa		4.82	□□□□□ -1.64
snR78	snR78	ATS1	P31386	333 aa		4.82	□□□□□ -1.64
snR78	snR78	NDC1	P32500	655 aa		4.82	□□□□□ -1.64
snR78	snR78	ALY1	P36117	915 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms