RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 DUG2P38149 878 aa0.12□□□□□ -2.39
snR50snR50 YIL060WP40519 144 aa0.12□□□□□ -2.39
snR50snR50 PKP2P53170 491 aa0.12□□□□□ -2.39
snR50snR50 YTP1P53584 459 aa0.12□□□□□ -2.39
snR50snR50 ESF2P53743 316 aaKnown RBP0.12□□□□□ -2.39
snR50snR50 RPN4Q03465 531 aa0.12□□□□□ -2.39
snR50snR50 YMR087WQ04299 284 aa0.12□□□□□ -2.39
snR50snR50 TAF7Q05021 590 aa0.12□□□□□ -2.39
snR50snR50 CRD1Q07560 283 aa0.12□□□□□ -2.39
snR50snR50 NTG2Q08214 380 aa0.12□□□□□ -2.39
snR50snR50 YTM1Q12024 460 aaPredicted RBP0.12□□□□□ -2.39
snR50snR50 SUL2Q12325 893 aa0.12□□□□□ -2.39
snR50snR50 APC2Q12440 853 aa0.12□□□□□ -2.39
snR50snR50 RVB2Q12464 471 aaKnown RBP0.12□□□□□ -2.39
snR50snR50 CAR1P00812 333 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 PET111P08468 800 aa0.11□□□□□ -2.39
snR50snR50 CPR1P14832 162 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 SRP54P20424 541 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 ATP12P22135 325 aa0.11□□□□□ -2.39
snR50snR50 PRP19P32523 503 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 MRP4P32902 394 aa0.11□□□□□ -2.39
snR50snR50 AAP1P37898 856 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 DTR1P38125 572 aa0.11□□□□□ -2.39
snR50snR50 VID24P38263 362 aa0.11□□□□□ -2.39
snR50snR50 ARP1P38696 384 aa0.11□□□□□ -2.39
snR50snR50 YLF2P38746 405 aa0.11□□□□□ -2.39
snR50snR50 UBP12P39538 1254 aa0.11□□□□□ -2.39
snR50snR50 MRX1P40050 688 aa0.11□□□□□ -2.39
snR50snR50 SHO1P40073 367 aa0.11□□□□□ -2.39
snR50snR50 FMP10P40098 244 aa0.11□□□□□ -2.39
snR50snR50 YIL067CP40514 678 aa0.11□□□□□ -2.39
snR50snR50 BUD6P41697 788 aa0.11□□□□□ -2.39
snR50snR50 SNU71P53207 620 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 HEF3P53978 1044 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 PEX25Q02969 394 aa0.11□□□□□ -2.39
snR50snR50 POB3Q04636 552 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 HRI1Q05905 244 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 ATG26Q06321 1198 aa0.11□□□□□ -2.39
snR50snR50 FDH1Q08911 376 aa0.11□□□□□ -2.39
snR50snR50 RTK1Q12100 620 aaPredicted RBP0.11□□□□□ -2.39
snR50snR50 RRP6Q12149 733 aaKnown RBP0.11□□□□□ -2.39
snR50snR50 YDL009CQ12210 107 aa0.11□□□□□ -2.39
snR50snR50 TEF1P02994 458 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 HIP1P06775 603 aa0.1□□□□□ -2.39
snR50snR50 PFK2P16862 959 aaKnown RBP RIP-Chip data0.1□□□□□ -2.39not detected
snR50snR50 CPR4P25334 318 aa0.1□□□□□ -2.39
snR50snR50 DAL2P25335 343 aa0.1□□□□□ -2.39
snR50snR50 YCR022CP25620 114 aa0.1□□□□□ -2.39
snR50snR50 RPS7AP26786 190 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 URK1P27515 501 aa0.1□□□□□ -2.39
snR50snR50 THI4P32318 326 aa0.1□□□□□ -2.39
snR50snR50 LHS1P36016 881 aa0.1□□□□□ -2.39
snR50snR50 TAF5P38129 798 aa0.1□□□□□ -2.39
snR50snR50 APM3P38153 483 aa0.1□□□□□ -2.39
snR50snR50 UBA4P38820 440 aa0.1□□□□□ -2.39
snR50snR50 TIM17P39515 158 aa0.1□□□□□ -2.39
snR50snR50 STL1P39932 569 aa0.1□□□□□ -2.39
snR50snR50 HAT2P39984 401 aa0.1□□□□□ -2.39
snR50snR50 NUP82P40368 713 aa0.1□□□□□ -2.39
snR50snR50 PAN6P40459 309 aa0.1□□□□□ -2.39
snR50snR50 GAB1P41733 394 aa0.1□□□□□ -2.39
snR50snR50 YJR085CP47131 105 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 PUS4P48567 403 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 FLC3P53121 802 aa0.1□□□□□ -2.39
snR50snR50 SDA1P53313 767 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 HOL1P53389 586 aa0.1□□□□□ -2.39
snR50snR50 MDG1P53885 366 aa0.1□□□□□ -2.39
snR50snR50 YPL108WQ02872 168 aaPredicted RBP0.1□□□□□ -2.39
snR50snR50 BNA5Q05979 453 aa0.1□□□□□ -2.39
snR50snR50 MLC2Q06580 163 aa0.1□□□□□ -2.39
snR50snR50 SSK1Q07084 712 aa0.1□□□□□ -2.39
snR50snR50 SYO1Q07395 620 aa0.1□□□□□ -2.39
snR50snR50 RDR1Q08904 546 aa0.1□□□□□ -2.39
snR50snR50 DBP10Q12389 995 aaKnown RBP0.1□□□□□ -2.39
snR50snR50 YML003WP0CF16 290 aa0.09□□□□□ -2.4
snR50snR50 APA1P16550 321 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 KGD1P20967 1014 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 MCM3P24279 971 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 LRE1P25579 583 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 NUP2P32499 720 aa0.09□□□□□ -2.4
snR50snR50 CYS4P32582 507 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 SOF1P33750 489 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 SHP1P34223 423 aa0.09□□□□□ -2.4
snR50snR50 PAM1P37304 830 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 LAG1P38703 411 aa0.09□□□□□ -2.4
snR50snR50 VPS52P39904 641 aa0.09□□□□□ -2.4
snR50snR50 SPO73P40031 143 aa0.09□□□□□ -2.4
snR50snR50 YFL067WP43537 175 aa0.09□□□□□ -2.4
snR50snR50 SMC3P47037 1230 aa0.09□□□□□ -2.4
snR50snR50 NRM1P53718 249 aa0.09□□□□□ -2.4
snR50snR50 CAF40P53829 373 aa0.09□□□□□ -2.4
snR50snR50 TOF1P53840 1238 aa0.09□□□□□ -2.4
snR50snR50 TFB2Q02939 513 aa0.09□□□□□ -2.4
snR50snR50 MTG1Q03151 367 aaPredicted RBP0.09□□□□□ -2.4
snR50snR50 MTQ2Q03920 221 aaPredicted RBP0.09□□□□□ -2.4
snR50snR50 YKU80Q04437 629 aa0.09□□□□□ -2.4
snR50snR50 VPS74Q06385 345 aa0.09□□□□□ -2.4
snR50snR50 TSR1Q07381 788 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 CUE5Q08412 411 aaKnown RBP0.09□□□□□ -2.4
snR50snR50 KEL3Q08979 651 aaPredicted RBP0.09□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 367.3 ms