RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W YOR019WQ99248 730 aa1.99□□□□□ -2.09
HER1YOR227W FRS1P15624 595 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W CHL1P22516 861 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W YSP3P25036 478 aa1.99□□□□□ -2.09
HER1YOR227W BUD5P25300 642 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W PHO91P27514 894 aa1.99□□□□□ -2.09
HER1YOR227W PRO3P32263 286 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W WBP1P33767 430 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
HER1YOR227W PTK1P36002 662 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W MRPL40P36534 297 aa1.99□□□□□ -2.09
HER1YOR227W RRT2P38332 387 aa1.99□□□□□ -2.09
HER1YOR227W RRM3P38766 723 aa1.99□□□□□ -2.09
HER1YOR227W GIP2P40036 548 aa1.99□□□□□ -2.09
HER1YOR227W ALG5P40350 334 aa1.99□□□□□ -2.09
HER1YOR227W CHS6P40955 746 aa1.99□□□□□ -2.09
HER1YOR227W BIT61P47041 543 aa1.99□□□□□ -2.09
HER1YOR227W MNT4P53745 580 aa1.99□□□□□ -2.09
HER1YOR227W DAK1P54838 584 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W RPT6Q01939 405 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W GPN2Q08726 347 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W YPR117WQ06116 2489 aa1.99□□□□□ -2.09
HER1YOR227W CHO2P05374 869 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W YML003WP0CF16 290 aa1.99□□□□□ -2.09
HER1YOR227W PCK1P10963 549 aa1.99□□□□□ -2.09
HER1YOR227W PWP1P21304 576 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W YCR061WP25639 631 aa1.99□□□□□ -2.09
HER1YOR227W MSP1P28737 362 aa1.99□□□□□ -2.09
HER1YOR227W TYE7P33122 291 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W UBP11P36026 717 aa1.99□□□□□ -2.09
HER1YOR227W AUR1P36107 401 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W NUP133P36161 1157 aa1.99□□□□□ -2.09
HER1YOR227W MNN2P38069 597 aa1.99□□□□□ -2.09
HER1YOR227W DED81P38707 554 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W SCC4P40090 624 aa1.99□□□□□ -2.09
HER1YOR227W YFL040WP43562 540 aa1.99□□□□□ -2.09
HER1YOR227W TAH11P47112 604 aa1.99□□□□□ -2.09
HER1YOR227W APT1P49435 187 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W TEL2P53038 688 aa1.99□□□□□ -2.09
HER1YOR227W EOS1P53938 366 aa1.99□□□□□ -2.09
HER1YOR227W KTR5P53966 522 aaPredicted RBP1.99□□□□□ -2.09
HER1YOR227W YMR210WQ03649 449 aa1.99□□□□□ -2.09
HER1YOR227W RQC1Q05468 723 aaKnown RBP1.99□□□□□ -2.09
HER1YOR227W STE23Q06010 1027 aa1.99□□□□□ -2.09
HER1YOR227W RCN2Q12044 265 aa1.99□□□□□ -2.09
HER1YOR227W BMT6Q12291 365 aa1.99□□□□□ -2.09
HER1YOR227W PRC1P00729 532 aa1.98□□□□□ -2.09
HER1YOR227W PRE10P21242 288 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
HER1YOR227W SYN8P31377 255 aa1.98□□□□□ -2.09
HER1YOR227W ASF2P32448 525 aaPredicted RBP1.98□□□□□ -2.09
HER1YOR227W HXT3P32466 567 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W MSS1P32559 526 aaPredicted RBP1.98□□□□□ -2.09
HER1YOR227W STE14P32584 239 aa1.98□□□□□ -2.09
HER1YOR227W TIF3P34167 436 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W SFB3P38810 929 aa1.98□□□□□ -2.09
HER1YOR227W UME6P39001 836 aa1.98□□□□□ -2.09
HER1YOR227W SHR5P41912 237 aa1.98□□□□□ -2.09
HER1YOR227W LEM3P42838 414 aa1.98□□□□□ -2.09
HER1YOR227W ELP2P42935 788 aa1.98□□□□□ -2.09
HER1YOR227W TRM44Q02648 567 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W YDR444WQ04093 687 aa1.98□□□□□ -2.09
HER1YOR227W INM2Q05533 292 aa1.98□□□□□ -2.09
HER1YOR227W ADF1Q2V2Q1 113 aa1.98□□□□□ -2.09
HER1YOR227W AFI1Q99222 893 aa1.98□□□□□ -2.09
HER1YOR227W RPS9AO13516 197 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W PRP6P19735 899 aaPredicted RBP1.98□□□□□ -2.09
HER1YOR227W ELO2P25358 347 aa1.98□□□□□ -2.09
HER1YOR227W FAA1P30624 700 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W RGT1P32862 1170 aa1.98□□□□□ -2.09
HER1YOR227W PMT1P33775 817 aa1.98□□□□□ -2.09
HER1YOR227W SRB2P34162 210 aa1.98□□□□□ -2.09
HER1YOR227W VID24P38263 362 aa1.98□□□□□ -2.09
HER1YOR227W SLX1P38324 304 aa1.98□□□□□ -2.09
HER1YOR227W MTG2P38860 518 aa1.98□□□□□ -2.09
HER1YOR227W CTF8P38877 133 aa1.98□□□□□ -2.09
HER1YOR227W CAB2P40506 365 aa1.98□□□□□ -2.09
HER1YOR227W TED1P40533 473 aa1.98□□□□□ -2.09
HER1YOR227W CAK1P43568 368 aaPredicted RBP1.98□□□□□ -2.09
HER1YOR227W GCD14P46959 383 aaPredicted RBP1.98□□□□□ -2.09
HER1YOR227W EXG2P52911 562 aa1.98□□□□□ -2.09
HER1YOR227W PUS2P53167 370 aa1.98□□□□□ -2.09
HER1YOR227W ARG5,6Q01217 863 aa1.98□□□□□ -2.09
HER1YOR227W UTP6Q02354 440 aaKnown RBP1.98□□□□□ -2.09
HER1YOR227W ELG1Q12050 791 aa1.98□□□□□ -2.09
HER1YOR227W HUA2Q12134 243 aa1.98□□□□□ -2.09
HER1YOR227W HER1Q12276 1246 aa1.98□□□□□ -2.09
HER1YOR227W PRB1P09232 635 aa1.97□□□□□ -2.09
HER1YOR227W HEM1P09950 548 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W KGD1P20967 1014 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W DMC1P25453 334 aa1.97□□□□□ -2.09
HER1YOR227W URK1P27515 501 aa1.97□□□□□ -2.09
HER1YOR227W PAP1P29468 568 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W RML2P32611 393 aa1.97□□□□□ -2.09
HER1YOR227W OCT1P35999 772 aa1.97□□□□□ -2.09
HER1YOR227W YKT6P36015 200 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W YHR112CP38716 378 aa1.97□□□□□ -2.09
HER1YOR227W OTU2P38747 307 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W YIL077CP40508 320 aa1.97□□□□□ -2.09
HER1YOR227W IST3P40565 148 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W GCV2P49095 1034 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms