RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	MCX1	P38323	520 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	BIT2	P38346	545 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	SEC72	P39742	193 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	AMA1	P50082	593 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YGL204C	P53089	101 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YKR005C	Q02203	525 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	NGL3	Q03210	505 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YPQ2	Q06328	317 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YLL007C	Q07799	665 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YTM1	Q12024	460 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	GPM3	Q12326	303 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	RAV1	P47104	1357 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	GCN4	P03069	281 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	FUM1	P08417	488 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	GCD2	P12754	651 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	HOP1	P20050	605 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	RAM1	P22007	431 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	CHL1	P22516	861 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	ADE1	P27616	306 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	MAL32	P38158	584 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	URA8	P38627	578 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	NEM1	P38757	446 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	MNN9	P39107	395 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	PAC1	P39946	494 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
SEC9	YGR009C	YJR115W	P47152	169 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	BIO3	P50277	480 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YGL138C	P53122	345 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	DUO1	P53168	247 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	MAL12	P53341	584 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	RPT4	P53549	437 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	CUS2	P53830	285 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	MOT3	P54785	490 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	YDR248C	Q03786	193 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	SNX41	Q04053	625 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	BNA7	Q04066	261 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	CRF1	Q04930	467 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	VID22	Q05934	901 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	YDL129W	Q07555	291 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	WHI4	Q07655	649 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	OXR1	Q08952	273 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	SWT1	Q12104	458 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	RPN5	Q12250	445 aa	Known RBP	4.85	□□□□□ -1.63
SEC9	YGR009C	RPN6	Q12377	434 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	ISN1	Q99312	450 aa		4.85	□□□□□ -1.63
SEC9	YGR009C	STE2	D6VTK4	431 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	LEU2	P04173	364 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	SBP1	P10080	294 aa	Known RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	CDC23	P16522	626 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	SRV2	P17555	526 aa	Known RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	ESS1	P22696	170 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	RBK1	P25332	333 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	YCL049C	P25577	312 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	DAL3	P32459	195 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	GDA1	P32621	518 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	CYM1	P32898	989 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	PTC4	P38089	393 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	HSL7	P38274	827 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	AMN1	P38285	549 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	RPH1	P39956	796 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	CHS6	P40955	746 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	CAF16	P43569	289 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	IRC7	P43623	340 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	YJR054W	P47114	497 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	YJR096W	P47137	282 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	RPA14	P50106	137 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	ALT2	P52892	507 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	SEH1	P53011	349 aa	Known RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	MET13	P53128	600 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	CUE3	P53137	624 aa	Known RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	SOL4	P53315	255 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	MPS1	P54199	764 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	SLD5	Q03406	294 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	YDR444W	Q04093	687 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	SWF1	Q04629	336 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	BCH1	Q05029	724 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	CUR1	Q06469	252 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	HIM1	Q06674	414 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	YPR084W	Q06821	456 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	RSB1	Q08417	382 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	SNU23	Q12368	194 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC9	YGR009C	RMP1	Q12530	201 aa		4.84	□□□□□ -1.63
SEC9	YGR009C	IPP1	P00817	287 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	HTA1	P04911	132 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	HTA2	P04912	132 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	RPP2A	P05319	106 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	LEU4	P06208	619 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	GPH1	P06738	902 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	GUK1	P15454	187 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	TYR1	P20049	452 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	AAT2	P23542	418 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	HXT4	P32467	576 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	VAM7	P32912	316 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
SEC9	YGR009C	YHR045W	P38775	560 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	YER010C	P40011	234 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	YJR111C	P47148	283 aa	Known RBP	4.84	□□□□□ -1.64
SEC9	YGR009C	FMS1	P50264	508 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	TEP1	P53916	434 aa		4.84	□□□□□ -1.64
SEC9	YGR009C	NUP116	Q02630	1113 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms