RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W SUC2P00724 532 aa1.32□□□□□ -2.2
SMC1YFL008W LAC1P28496 418 aa1.32□□□□□ -2.2
SMC1YFL008W APD1P38281 316 aa1.32□□□□□ -2.2
SMC1YFL008W STB2P46679 850 aa1.32□□□□□ -2.2
SMC1YFL008W GLO1P50107 326 aa1.32□□□□□ -2.2
SMC1YFL008W ARE2P53629 642 aaKnown RBP1.32□□□□□ -2.2
SMC1YFL008W TPO3Q06451 622 aa1.32□□□□□ -2.2
SMC1YFL008W PET122P10355 254 aa1.31□□□□□ -2.2
SMC1YFL008W KAR1P11927 433 aa1.31□□□□□ -2.2
SMC1YFL008W TKL1P23254 680 aaKnown RBP1.31□□□□□ -2.2
SMC1YFL008W ERG8P24521 451 aa1.31□□□□□ -2.2
SMC1YFL008W ARC40P38328 384 aaKnown RBP1.31□□□□□ -2.2
SMC1YFL008W NPR3P38742 1146 aa1.31□□□□□ -2.2
SMC1YFL008W PHO90P39535 881 aa1.31□□□□□ -2.2
SMC1YFL008W ECM10P39987 644 aa1.31□□□□□ -2.2
SMC1YFL008W YIL060WP40519 144 aa1.31□□□□□ -2.2
SMC1YFL008W SCW4P53334 386 aaKnown RBP1.31□□□□□ -2.2
SMC1YFL008W MPS1P54199 764 aa1.31□□□□□ -2.2
SMC1YFL008W YLR112WQ12130 139 aa1.31□□□□□ -2.2
SMC1YFL008W LYS2P07702 1392 aa1.31□□□□□ -2.2
SMC1YFL008W PRP16P15938 1071 aaPredicted RBP1.31□□□□□ -2.2
SMC1YFL008W SRB5P32585 307 aa1.31□□□□□ -2.2
SMC1YFL008W ATO2P32907 282 aa1.31□□□□□ -2.2
SMC1YFL008W COS10P52924 374 aa1.31□□□□□ -2.2
SMC1YFL008W SLG1P54867 378 aa1.31□□□□□ -2.2
SMC1YFL008W PCI8P40512 444 aa1.31□□□□□ -2.2
SMC1YFL008W MEP2P41948 499 aa1.31□□□□□ -2.2
SMC1YFL008W COG2P53271 262 aa1.31□□□□□ -2.2
SMC1YFL008W SSP2Q08646 371 aa1.31□□□□□ -2.2
SMC1YFL008W ISN1Q99312 450 aa1.31□□□□□ -2.2
SMC1YFL008W RGT1P32862 1170 aa1.3□□□□□ -2.2
SMC1YFL008W MTR2P34232 184 aaKnown RBP1.3□□□□□ -2.2
SMC1YFL008W MNT3P40549 630 aa1.3□□□□□ -2.2
SMC1YFL008W SNO3P43544 222 aa1.3□□□□□ -2.2
SMC1YFL008W YFR020WP43600 232 aa1.3□□□□□ -2.2
SMC1YFL008W MEP3P53390 489 aa1.3□□□□□ -2.2
SMC1YFL008W YOR111WQ99210 232 aa1.3□□□□□ -2.2
SMC1YFL008W LAA1P39526 2014 aa1.3□□□□□ -2.2
SMC1YFL008W MRPL9P31334 269 aa1.3□□□□□ -2.2
SMC1YFL008W MUM2P38236 366 aa1.3□□□□□ -2.2
SMC1YFL008W DHH1P39517 506 aaKnown RBP1.3□□□□□ -2.2
SMC1YFL008W YJL043WP47053 257 aa1.3□□□□□ -2.2
SMC1YFL008W YML131WQ03102 365 aa1.3□□□□□ -2.2
SMC1YFL008W RSM28Q03430 361 aa1.3□□□□□ -2.2
SMC1YFL008W YMR254CQ04838 102 aa1.3□□□□□ -2.2
SMC1YFL008W TMA16Q08687 178 aa1.3□□□□□ -2.2
SMC1YFL008W NEW1Q08972 1196 aaKnown RBP1.3□□□□□ -2.2
SMC1YFL008W SIR4P11978 1358 aa1.3□□□□□ -2.2
SMC1YFL008W ADE17P38009 592 aaKnown RBP1.3□□□□□ -2.2
SMC1YFL008W LAS21P40367 830 aa1.3□□□□□ -2.2
SMC1YFL008W RIC1P40395 1056 aa1.3□□□□□ -2.2
SMC1YFL008W YJR008WP47085 338 aa1.3□□□□□ -2.2
SMC1YFL008W COG1P53079 417 aa1.3□□□□□ -2.2
SMC1YFL008W STP1Q00947 519 aa1.3□□□□□ -2.2
SMC1YFL008W SMA1Q02651 245 aa1.3□□□□□ -2.2
SMC1YFL008W MTG1Q03151 367 aaPredicted RBP1.3□□□□□ -2.2
SMC1YFL008W SWA2Q06677 668 aa1.3□□□□□ -2.2
SMC1YFL008W THI3Q07471 609 aa1.3□□□□□ -2.2
SMC1YFL008W YAP7Q08182 245 aa1.3□□□□□ -2.2
SMC1YFL008W GSH2Q08220 491 aa1.3□□□□□ -2.2
SMC1YFL008W RRI1Q12468 440 aa1.3□□□□□ -2.2
SMC1YFL008W ECM29P38737 1868 aa1.3□□□□□ -2.2
SMC1YFL008W PWP2P25635 923 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W MGM1P32266 881 aa1.29□□□□□ -2.2
SMC1YFL008W MIA40P36046 403 aa1.29□□□□□ -2.2
SMC1YFL008W RIM4P38741 713 aa1.29□□□□□ -2.2
SMC1YFL008W SEC31P38968 1273 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W DJP1P40564 432 aa1.29□□□□□ -2.2
SMC1YFL008W IDS2P46958 469 aa1.29□□□□□ -2.2
SMC1YFL008W VPS4P52917 437 aa1.29□□□□□ -2.2
SMC1YFL008W YGR250CP53316 781 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W ATG21Q02887 496 aa1.29□□□□□ -2.2
SMC1YFL008W NGL3Q03210 505 aa1.29□□□□□ -2.2
SMC1YFL008W YMR034CQ05131 434 aaPredicted RBP1.29□□□□□ -2.2
SMC1YFL008W RTT103Q05543 409 aa1.29□□□□□ -2.2
SMC1YFL008W VIP1Q06685 1146 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W YOR365CQ08844 703 aa1.29□□□□□ -2.2
SMC1YFL008W PWP1P21304 576 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W PDE1P22434 369 aa1.29□□□□□ -2.2
SMC1YFL008W TIF3P34167 436 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W YKL133CP36066 463 aa1.29□□□□□ -2.2
SMC1YFL008W FLO5P38894 1075 aa1.29□□□□□ -2.2
SMC1YFL008W SEC24P40482 926 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W CAB2P40506 365 aa1.29□□□□□ -2.2
SMC1YFL008W AAD10P47182 288 aa1.29□□□□□ -2.2
SMC1YFL008W BOR1P53838 576 aa1.29□□□□□ -2.2
SMC1YFL008W BET4Q00618 327 aa1.29□□□□□ -2.2
SMC1YFL008W EKI1Q03764 534 aa1.29□□□□□ -2.2
SMC1YFL008W MET8P15807 274 aa1.29□□□□□ -2.2
SMC1YFL008W SEC15P22224 910 aa1.29□□□□□ -2.2
SMC1YFL008W CLB4P24871 460 aa1.29□□□□□ -2.2
SMC1YFL008W SDS22P36047 338 aa1.29□□□□□ -2.2
SMC1YFL008W SLZ1P40167 298 aa1.29□□□□□ -2.2
SMC1YFL008W GCD10P41814 478 aa1.29□□□□□ -2.2
SMC1YFL008W RCO1Q04779 684 aa1.29□□□□□ -2.2
SMC1YFL008W GFD1Q04839 188 aaKnown RBP1.29□□□□□ -2.2
SMC1YFL008W SWT1Q12104 458 aa1.29□□□□□ -2.2
SMC1YFL008W YOR019WQ99248 730 aa1.29□□□□□ -2.2
SMC1YFL008W BAR1P12630 587 aa1.28□□□□□ -2.2
SMC1YFL008W PPZ1P26570 692 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms