RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	CBK1	P53894	756 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	REG1	Q00816	1014 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	VPS72	Q03388	795 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	PRP42	Q03776	544 aa	Known RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	SNO4	Q04902	237 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	HSP33	Q08914	237 aa	Known RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	HSP32	Q08992	237 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	RRG1	Q12167	365 aa	Predicted RBP	4.86	□□□□□ -1.63
PTC1	YDL006W	YNL162W-A	Q3E7A8	72 aa		4.86	□□□□□ -1.63
PTC1	YDL006W	OPI1	P21957	404 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	MBR1	P23493	339 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	YSP3	P25036	478 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	CDC15	P27636	974 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	CHS3	P29465	1165 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	MRP20	P32387	263 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	GSH1	P32477	678 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	AAP1	P37898	856 aa	Known RBP	4.85	□□□□□ -1.63
PTC1	YDL006W	PFK26	P40433	827 aa	Known RBP	4.85	□□□□□ -1.63
PTC1	YDL006W	IRC8	P47046	822 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	TMA64	Q04600	565 aa	Known RBP	4.85	□□□□□ -1.63
PTC1	YDL006W	ORM2	Q06144	216 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	TAH18	Q12181	623 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	YLR111W	Q12528	110 aa		4.85	□□□□□ -1.63
PTC1	YDL006W	ERG8	P24521	451 aa		4.84	□□□□□ -1.63
PTC1	YDL006W	YIR014W	P40570	242 aa		4.84	□□□□□ -1.63
PTC1	YDL006W	ARC1	P46672	376 aa	Known RBP	4.84	□□□□□ -1.63
PTC1	YDL006W	ATP23	P53722	227 aa		4.84	□□□□□ -1.63
PTC1	YDL006W	SWA2	Q06677	668 aa		4.84	□□□□□ -1.63
PTC1	YDL006W	PSK2	Q08217	1101 aa		4.84	□□□□□ -1.63
PTC1	YDL006W	PGK1	P00560	416 aa	Known RBP	4.83	□□□□□ -1.64
PTC1	YDL006W	RNR2	P09938	399 aa	Known RBP	4.83	□□□□□ -1.64
PTC1	YDL006W	ERG11	P10614	530 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	SEC31	P38968	1273 aa	Known RBP	4.83	□□□□□ -1.64
PTC1	YDL006W	YJR061W	P40355	935 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	DPH1	P40487	425 aa	Known RBP	4.83	□□□□□ -1.64
PTC1	YDL006W	MNT3	P40549	630 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	SIP4	P46954	829 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	BSC5	P53755	489 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	YPL071C	Q02864	156 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	MUB1	Q03162	620 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	CRN1	Q06440	651 aa		4.83	□□□□□ -1.64
PTC1	YDL006W	ILS1	P09436	1072 aa	Known RBP	4.82	□□□□□ -1.64
PTC1	YDL006W	SRP54	P20424	541 aa	Known RBP	4.82	□□□□□ -1.64
PTC1	YDL006W	NTR2	P36118	322 aa	Predicted RBP	4.82	□□□□□ -1.64
PTC1	YDL006W	PSD1	P39006	500 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	MRX1	P40050	688 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	AAD10	P47182	288 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	TRM44	Q02648	567 aa	Known RBP	4.82	□□□□□ -1.64
PTC1	YDL006W	SEG1	Q04279	960 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	MRD1	Q06106	887 aa	Known RBP	4.82	□□□□□ -1.64
PTC1	YDL006W	TPO3	Q06451	622 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	YOR389W	Q08912	624 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	SKM1	Q12469	655 aa		4.82	□□□□□ -1.64
PTC1	YDL006W	SNF3	P10870	884 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	GFD2	P25370	566 aa	Known RBP	4.81	□□□□□ -1.64
PTC1	YDL006W	IMP2'	P32351	346 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PTC1	YDL006W	LHS1	P36016	881 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	IMD2	P38697	523 aa	Known RBP	4.81	□□□□□ -1.64
PTC1	YDL006W	NOP16	P40007	231 aa	Known RBP	4.81	□□□□□ -1.64
PTC1	YDL006W	SLZ1	P40167	298 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	TMA108	P40462	946 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	SPO22	P40511	975 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	CIN1	P40987	1014 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	NMD5	P46970	1048 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	IMD3	P50095	523 aa	Known RBP	4.81	□□□□□ -1.64
PTC1	YDL006W	ORC5	P50874	479 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	YNR061C	P53747	219 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	ARP5	P53946	755 aa		4.81	□□□□□ -1.64
PTC1	YDL006W	FIG2	P25653	1609 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	FAS2	P19097	1887 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	SEM1	O94742	89 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	SUI3	P09064	285 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	CDC24	P11433	854 aa	Predicted RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	COQ1	P18900	473 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	APN1	P22936	367 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	PAH1	P32567	862 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	SOF1	P33750	489 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	RTS1	P38903	757 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	FMP10	P40098	244 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	SNO3	P43544	222 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	SWP82	P43554	623 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	SNU56	Q03782	492 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	YKU80	Q04437	629 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	YDR056C	Q12025	205 aa		4.8	□□□□□ -1.64
PTC1	YDL006W	GET3	Q12154	354 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	PGA3	Q12746	312 aa	Known RBP	4.8	□□□□□ -1.64
PTC1	YDL006W	DUR1,2	P32528	1835 aa	Known RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	MRP2	P10663	115 aa	Predicted RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	URE2	P23202	354 aa	Known RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	PRE8	P23639	250 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	PEP3	P27801	918 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	MSS51	P32335	436 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	PEX2	P32800	271 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	ALY1	P36117	915 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	ERV46	P39727	415 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	TPA1	P40032	644 aa	Known RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	LTP1	P40347	161 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	CDC1	P40986	491 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	IME4	P41833	600 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms