RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W SAM50P53969 484 aa2.95□□□□□ -1.94
HMRA1YCR097W ADE13Q05911 482 aaKnown RBP2.95□□□□□ -1.94
HMRA1YCR097W VAM6Q07468 1049 aa2.95□□□□□ -1.94
HMRA1YCR097W YDL012CQ12489 107 aa2.95□□□□□ -1.94
HMRA1YCR097W SEC62P21825 274 aa2.94□□□□□ -1.94
HMRA1YCR097W SAC6P32599 642 aaKnown RBP2.94□□□□□ -1.94
HMRA1YCR097W SPR1P32603 445 aa2.94□□□□□ -1.94
HMRA1YCR097W VPS17P32913 551 aa2.94□□□□□ -1.94
HMRA1YCR097W ECM15P35195 104 aa2.94□□□□□ -1.94
HMRA1YCR097W YLR152CP54072 576 aa2.94□□□□□ -1.94
HMRA1YCR097W MOT3P54785 490 aaKnown RBP2.94□□□□□ -1.94
HMRA1YCR097W THI20Q08224 551 aa2.94□□□□□ -1.94
HMRA1YCR097W HNT3Q08702 217 aa2.94□□□□□ -1.94
HMRA1YCR097W RRP6Q12149 733 aaKnown RBP2.94□□□□□ -1.94
HMRA1YCR097W MIS1P09440 975 aaKnown RBP2.93□□□□□ -1.94
HMRA1YCR097W ESL2P36168 1195 aa2.93□□□□□ -1.94
HMRA1YCR097W CTF18P49956 741 aa2.93□□□□□ -1.94
HMRA1YCR097W YMR087WQ04299 284 aa2.93□□□□□ -1.94
HMRA1YCR097W RER1P25560 188 aa2.92□□□□□ -1.94
HMRA1YCR097W CMK1P27466 446 aaKnown RBP2.92□□□□□ -1.94
HMRA1YCR097W SNC1P31109 117 aa2.92□□□□□ -1.94
HMRA1YCR097W UBA4P38820 440 aa2.92□□□□□ -1.94
HMRA1YCR097W SIM1P40472 476 aa2.92□□□□□ -1.94
HMRA1YCR097W TEP1P53916 434 aa2.92□□□□□ -1.94
HMRA1YCR097W YOL057WQ08225 711 aa2.92□□□□□ -1.94
HMRA1YCR097W YOR387CQ08910 206 aa2.92□□□□□ -1.94
HMRA1YCR097W YOL114CQ12322 202 aa2.92□□□□□ -1.94
HMRA1YCR097W RRP12Q12754 1228 aaKnown RBP2.92□□□□□ -1.94
HMRA1YCR097W YER078W-AQ3E7A2 54 aa2.92□□□□□ -1.94
HMRA1YCR097W ATP2P00830 511 aaKnown RBP2.91□□□□□ -1.94
HMRA1YCR097W NUP120P35729 1037 aa2.91□□□□□ -1.94
HMRA1YCR097W TUL1P36096 758 aa2.91□□□□□ -1.94
HMRA1YCR097W APM3P38153 483 aa2.91□□□□□ -1.94
HMRA1YCR097W RFS1P38234 210 aaKnown RBP2.91□□□□□ -1.94
HMRA1YCR097W SSK1Q07084 712 aa2.91□□□□□ -1.94
HMRA1YCR097W SNF3P10870 884 aa2.9□□□□□ -1.95
HMRA1YCR097W NAM9P27929 486 aa2.9□□□□□ -1.95
HMRA1YCR097W YME1P32795 747 aa2.9□□□□□ -1.95
HMRA1YCR097W SMC3P47037 1230 aa2.9□□□□□ -1.95
HMRA1YCR097W MSO1P53604 210 aaKnown RBP2.9□□□□□ -1.95
HMRA1YCR097W CPR6P53691 371 aaKnown RBP2.9□□□□□ -1.95
HMRA1YCR097W WSC2P53832 503 aa2.9□□□□□ -1.95
HMRA1YCR097W IST1P53843 298 aaPredicted RBP2.9□□□□□ -1.95
HMRA1YCR097W SPT15P13393 240 aaKnown RBP2.89□□□□□ -1.95
HMRA1YCR097W YIM1P28625 365 aa2.89□□□□□ -1.95
HMRA1YCR097W PMU1P36069 295 aa2.89□□□□□ -1.95
HMRA1YCR097W NPR2P39923 615 aa2.89□□□□□ -1.95
HMRA1YCR097W DIC1Q06143 298 aa2.89□□□□□ -1.95
HMRA1YCR097W FAB1P34756 2278 aa2.89□□□□□ -1.95
HMRA1YCR097W ATR1P13090 542 aa2.88□□□□□ -1.95
HMRA1YCR097W PGS1P25578 521 aa2.88□□□□□ -1.95
HMRA1YCR097W DEG1P31115 442 aaKnown RBP2.88□□□□□ -1.95
HMRA1YCR097W PKP1P40530 394 aa2.88□□□□□ -1.95
HMRA1YCR097W TRS130Q03660 1102 aa2.88□□□□□ -1.95
HMRA1YCR097W PIF1P07271 859 aa2.87□□□□□ -1.95
HMRA1YCR097W ISY1P21374 235 aaPredicted RBP2.87□□□□□ -1.95
HMRA1YCR097W SRB5P32585 307 aa2.87□□□□□ -1.95
HMRA1YCR097W YBR138CP38277 524 aa2.87□□□□□ -1.95
HMRA1YCR097W APL4Q12028 832 aa2.87□□□□□ -1.95
HMRA1YCR097W LCB1P25045 558 aaKnown RBP2.86□□□□□ -1.95
HMRA1YCR097W FUN19P28003 413 aaPredicted RBP2.86□□□□□ -1.95
HMRA1YCR097W YGR210CP42942 411 aa2.86□□□□□ -1.95
HMRA1YCR097W HXK2P04807 486 aaKnown RBP2.85□□□□□ -1.95
HMRA1YCR097W GRX4P32642 244 aa2.85□□□□□ -1.95
HMRA1YCR097W PAD1P33751 242 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
HMRA1YCR097W TFC3P34111 1160 aa2.85□□□□□ -1.95
HMRA1YCR097W PAF1P38351 445 aa2.85□□□□□ -1.95
HMRA1YCR097W VPS52P39904 641 aa2.85□□□□□ -1.95
HMRA1YCR097W ASE1P50275 885 aa2.85□□□□□ -1.95
HMRA1YCR097W ATG9Q12142 997 aa2.85□□□□□ -1.95
HMRA1YCR097W YCR022CP25620 114 aa2.84□□□□□ -1.95
HMRA1YCR097W SWD3P38123 315 aa2.84□□□□□ -1.95
HMRA1YCR097W SPC72P39723 622 aa2.84□□□□□ -1.95
HMRA1YCR097W STR3P53101 465 aaKnown RBP2.84□□□□□ -1.95
HMRA1YCR097W RRG7Q08774 242 aaPredicted RBP2.84□□□□□ -1.95
HMRA1YCR097W SST2P11972 698 aaKnown RBP2.83□□□□□ -1.96
HMRA1YCR097W YBL059WP34224 193 aa2.83□□□□□ -1.96
HMRA1YCR097W ROT2P38138 954 aa2.83□□□□□ -1.96
HMRA1YCR097W LAG1P38703 411 aa2.83□□□□□ -1.96
HMRA1YCR097W NDT80P38830 627 aa2.83□□□□□ -1.96
HMRA1YCR097W ANS1P38832 159 aa2.83□□□□□ -1.96
HMRA1YCR097W CSM2P40465 213 aa2.83□□□□□ -1.96
HMRA1YCR097W CSL4P53859 292 aaPredicted RBP2.83□□□□□ -1.96
HMRA1YCR097W BRE1Q07457 700 aaKnown RBP2.83□□□□□ -1.96
HMRA1YCR097W ENT4Q07872 247 aa2.83□□□□□ -1.96
HMRA1YCR097W TMA16Q08687 178 aa2.83□□□□□ -1.96
HMRA1YCR097W HRT3Q12347 344 aa2.83□□□□□ -1.96
HMRA1YCR097W DPB11P47027 764 aaPredicted RBP2.82□□□□□ -1.96
HMRA1YCR097W RNY1Q02933 434 aaKnown RBP2.82□□□□□ -1.96
HMRA1YCR097W TMS1Q12116 473 aa2.82□□□□□ -1.96
HMRA1YCR097W CAR1P00812 333 aaKnown RBP2.81□□□□□ -1.96
HMRA1YCR097W YKL050CP35736 922 aa2.81□□□□□ -1.96
HMRA1YCR097W SHO1P40073 367 aa2.81□□□□□ -1.96
HMRA1YCR097W RLI1Q03195 608 aaKnown RBP2.81□□□□□ -1.96
HMRA1YCR097W GLO2Q05584 274 aa2.81□□□□□ -1.96
HMRA1YCR097W SUP35P05453 685 aaKnown RBP2.8□□□□□ -1.96
HMRA1YCR097W CLN3P13365 580 aa2.8□□□□□ -1.96
HMRA1YCR097W CLB4P24871 460 aa2.8□□□□□ -1.96
HMRA1YCR097W YVH1Q02256 364 aaKnown RBP2.8□□□□□ -1.96
HMRA1YCR097W ELP3Q02908 557 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms