RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	MED8	P38304	223 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	TCD1	P38756	429 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	HYR1	P40581	163 aa	Known RBP	4.22	□□□□□ -1.73
FDH1	YOR388C	YNL034W	P53963	612 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	ARA2	Q04212	335 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	TDA9	Q04545	1251 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	CSR2	Q12734	1121 aa		4.22	□□□□□ -1.73
FDH1	YOR388C	RNR2	P09938	399 aa	Known RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	GCD7	P32502	381 aa	Predicted RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	LTV1	P34078	463 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	MIC60	P36112	540 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	TOM71	P38825	639 aa	Known RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	ERV46	P39727	415 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	STB2	P46679	850 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	RPL15B	P54780	204 aa	Predicted RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	CEG1	Q01159	459 aa	Predicted RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	ATX2	Q12067	313 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	GET3	Q12154	354 aa	Known RBP	4.21	□□□□□ -1.74
FDH1	YOR388C	ARP7	Q12406	477 aa		4.21	□□□□□ -1.74
FDH1	YOR388C	PDE1	P22434	369 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	AIM17	P23180	465 aa	Known RBP	4.2	□□□□□ -1.74
FDH1	YOR388C	MPE1	P35728	441 aa	Known RBP	4.2	□□□□□ -1.74
FDH1	YOR388C	MRPL10	P36520	322 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	KTR3	P38130	404 aa	Predicted RBP	4.2	□□□□□ -1.74
FDH1	YOR388C	KEL1	P38853	1164 aa	Known RBP	4.2	□□□□□ -1.74
FDH1	YOR388C	FLO5	P38894	1075 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	ESF2	P53743	316 aa	Known RBP	4.2	□□□□□ -1.74
FDH1	YOR388C	TGL2	P54857	326 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	VTC3	Q02725	835 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	NCB2	Q92317	146 aa		4.2	□□□□□ -1.74
FDH1	YOR388C	GAL4	P04386	881 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	SNF3	P10870	884 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	BIK1	P11709	440 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
FDH1	YOR388C	YCP4	P25349	247 aa	Known RBP	4.19	□□□□□ -1.74
FDH1	YOR388C	PTC6	P25646	442 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	GSH1	P32477	678 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	SIP1	P32578	815 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	GRX7	P38068	203 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	YBL028C	P38202	106 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	ERC1	P38767	581 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	MEP2	P41948	499 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	RPS0B	P46654	252 aa	Known RBP	4.19	□□□□□ -1.74
FDH1	YOR388C	ORC5	P50874	479 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	YGL242C	P53066	181 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	RRT6	P53117	311 aa	Predicted RBP	4.19	□□□□□ -1.74
FDH1	YOR388C	VPS60	Q03390	229 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	SFI1	Q12369	946 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	YOL087C	Q99247	1116 aa		4.19	□□□□□ -1.74
FDH1	YOR388C	FIG2	P25653	1609 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	CDC16	P09798	840 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	SPC110	P32380	944 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	APE3	P37302	537 aa	Known RBP	4.18	□□□□□ -1.74
FDH1	YOR388C	RFC1	P38630	861 aa	Known RBP	4.18	□□□□□ -1.74
FDH1	YOR388C	RSM25	P40496	264 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	YJL107C	P42947	387 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	PIB2	P53191	635 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	LSC1	P53598	329 aa	Known RBP	4.18	□□□□□ -1.74
FDH1	YOR388C	MRS2	Q01926	470 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	PDR18	P53756	1333 aa		4.18	□□□□□ -1.74
FDH1	YOR388C	PIF1	P07271	859 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	ILV2	P07342	687 aa	Known RBP	4.17	□□□□□ -1.74
FDH1	YOR388C	RNA1	P11745	407 aa	Known RBP	4.17	□□□□□ -1.74
FDH1	YOR388C	NIC96	P34077	839 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	ARN1	P38731	627 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	YMR147W	P40218	223 aa	Known RBP	4.17	□□□□□ -1.74
FDH1	YOR388C	UBP7	P40453	1071 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	MDV1	P47025	714 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	SRL1	Q08673	210 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	LEA1	Q08963	238 aa	Predicted RBP	4.17	□□□□□ -1.74
FDH1	YOR388C	PFA4	Q12006	378 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	ICL2	Q12031	575 aa		4.17	□□□□□ -1.74
FDH1	YOR388C	FRS2	P15625	503 aa	Known RBP	4.16	□□□□□ -1.74
FDH1	YOR388C	SIR1	P21691	654 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	CNA1	P23287	553 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	CLB1	P24868	471 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	NPR3	P38742	1146 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	ACA1	P39970	489 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	MAD3	P47074	515 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	LYS20	P48570	428 aa	Known RBP	4.16	□□□□□ -1.74
FDH1	YOR388C	MLC1	P53141	149 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	YPL108W	Q02872	168 aa	Predicted RBP	4.16	□□□□□ -1.74
FDH1	YOR388C	NUP53	Q03790	475 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	SND1	Q04007	877 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	RBA50	Q04418	439 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	SML1	Q04964	104 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	KEL3	Q08979	651 aa	Predicted RBP	4.16	□□□□□ -1.74
FDH1	YOR388C	UBX3	Q12229	455 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	HKR1	P41809	1802 aa		4.16	□□□□□ -1.74
FDH1	YOR388C	CYB2	P00175	591 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	KRS1	P15180	591 aa	Known RBP	4.15	□□□□□ -1.75
FDH1	YOR388C	MSH1	P25846	959 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	ATO2	P32907	282 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	MFT1	P33441	392 aa	Known RBP	4.15	□□□□□ -1.75
FDH1	YOR388C	HES1	P35843	434 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	STT3	P39007	718 aa	Known RBP	4.15	□□□□□ -1.75
FDH1	YOR388C	DSN1	P40568	576 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	YOL114C	Q12322	202 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	RRI1	Q12468	440 aa		4.15	□□□□□ -1.75
FDH1	YOR388C	COX1	P00401	534 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms