RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W SER3P40054 469 aa3.22□□□□□ -1.89
MSH2YOL090W FTR1P40088 404 aa3.22□□□□□ -1.89
MSH2YOL090W LRO1P40345 661 aa3.22□□□□□ -1.89
MSH2YOL090W PXA1P41909 870 aa3.22□□□□□ -1.89
MSH2YOL090W EPL1P43572 832 aa3.22□□□□□ -1.89
MSH2YOL090W BIT61P47041 543 aa3.22□□□□□ -1.89
MSH2YOL090W KEL2P50090 882 aa3.22□□□□□ -1.89
MSH2YOL090W MLC1P53141 149 aa3.22□□□□□ -1.89
MSH2YOL090W YBP2P53169 641 aa3.22□□□□□ -1.89
MSH2YOL090W VPS64Q03944 604 aa3.22□□□□□ -1.89
MSH2YOL090W MSC3Q05812 728 aa3.22□□□□□ -1.89
MSH2YOL090W CDA1Q06702 301 aa3.22□□□□□ -1.89
MSH2YOL090W UBX3Q12229 455 aa3.22□□□□□ -1.89
MSH2YOL090W SVS1Q12254 260 aa3.22□□□□□ -1.89
MSH2YOL090W YJR112W-AQ3E743 109 aa3.22□□□□□ -1.89
MSH2YOL090W YOR019WQ99248 730 aa3.22□□□□□ -1.89
MSH2YOL090W TPK2P06245 380 aa3.22□□□□□ -1.89
MSH2YOL090W DFR1P07807 211 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
MSH2YOL090W EST1P17214 699 aaPredicted RBP3.22□□□□□ -1.89
MSH2YOL090W VPS33P20795 691 aa3.22□□□□□ -1.89
MSH2YOL090W GRR1P24814 1151 aa3.22□□□□□ -1.89
MSH2YOL090W BUD14P27637 709 aa3.22□□□□□ -1.89
MSH2YOL090W PMT1P33775 817 aa3.22□□□□□ -1.89
MSH2YOL090W SRB2P34162 210 aa3.22□□□□□ -1.89
MSH2YOL090W SMC2P38989 1170 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W CHS6P40955 746 aa3.22□□□□□ -1.89
MSH2YOL090W CUE3P53137 624 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W MDR1P53258 950 aa3.22□□□□□ -1.89
MSH2YOL090W CLP1Q08685 445 aaPredicted RBP3.22□□□□□ -1.89
MSH2YOL090W ATG29Q12092 213 aa3.22□□□□□ -1.89
MSH2YOL090W PRP4P20053 465 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W BUD5P25300 642 aaPredicted RBP3.22□□□□□ -1.89
MSH2YOL090W YJU2P28320 278 aaPredicted RBP3.22□□□□□ -1.89
MSH2YOL090W SYN8P31377 255 aa3.22□□□□□ -1.89
MSH2YOL090W RRM3P38766 723 aa3.22□□□□□ -1.89
MSH2YOL090W SAK1P38990 1142 aa3.22□□□□□ -1.89
MSH2YOL090W PFA3P42836 336 aa3.22□□□□□ -1.89
MSH2YOL090W EFM3P47163 339 aa3.22□□□□□ -1.89
MSH2YOL090W YGR111WP53265 400 aa3.22□□□□□ -1.89
MSH2YOL090W RHO5P53879 331 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W PPN1Q04119 674 aa3.22□□□□□ -1.89
MSH2YOL090W MUS81Q04149 632 aaPredicted RBP3.22□□□□□ -1.89
MSH2YOL090W UFO1Q04511 668 aa3.22□□□□□ -1.89
MSH2YOL090W RQC1Q05468 723 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W TCO89Q08921 799 aa3.22□□□□□ -1.89
MSH2YOL090W VPS54Q12071 889 aa3.22□□□□□ -1.89
MSH2YOL090W PNO1Q99216 274 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W GLT1Q12680 2145 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W RNA1P11745 407 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W SAC7P17121 654 aa3.21□□□□□ -1.9
MSH2YOL090W ERG6P25087 383 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W LTV1P34078 463 aa3.21□□□□□ -1.9
MSH2YOL090W MAE1P36013 669 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W KTR3P38130 404 aaPredicted RBP3.21□□□□□ -1.9
MSH2YOL090W MMS4P38257 691 aa3.21□□□□□ -1.9
MSH2YOL090W DED81P38707 554 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W CTF8P38877 133 aa3.21□□□□□ -1.9
MSH2YOL090W YER034WP40022 185 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W ALK1P43633 760 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W FMS1P50264 508 aa3.21□□□□□ -1.9
MSH2YOL090W COS12P53053 380 aa3.21□□□□□ -1.9
MSH2YOL090W ARG5,6Q01217 863 aa3.21□□□□□ -1.9
MSH2YOL090W TUP1P16649 713 aa3.21□□□□□ -1.9
MSH2YOL090W DMC1P25453 334 aa3.21□□□□□ -1.9
MSH2YOL090W PAP1P29468 568 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W AFG1P32317 509 aa3.21□□□□□ -1.9
MSH2YOL090W WBP1P33767 430 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W PEX32P38292 413 aa3.21□□□□□ -1.9
MSH2YOL090W NTC20P38302 140 aaPredicted RBP3.21□□□□□ -1.9
MSH2YOL090W RFC3P38629 340 aa3.21□□□□□ -1.9
MSH2YOL090W ERC1P38767 581 aa3.21□□□□□ -1.9
MSH2YOL090W SFB3P38810 929 aa3.21□□□□□ -1.9
MSH2YOL090W ELO3P40319 345 aa3.21□□□□□ -1.9
MSH2YOL090W MAF1P41910 395 aa3.21□□□□□ -1.9
MSH2YOL090W SMC3P47037 1230 aa3.21□□□□□ -1.9
MSH2YOL090W MTR3P48240 250 aaPredicted RBP3.21□□□□□ -1.9
MSH2YOL090W YML037CQ03703 340 aa3.21□□□□□ -1.9
MSH2YOL090W TAP42Q04372 366 aa3.21□□□□□ -1.9
MSH2YOL090W RGC1Q06108 1083 aaKnown RBP3.21□□□□□ -1.9
MSH2YOL090W AVL9Q12500 764 aa3.21□□□□□ -1.9
MSH2YOL090W PDR11P40550 1411 aa3.21□□□□□ -1.9
MSH2YOL090W PRE8P23639 250 aa3.2□□□□□ -1.9
MSH2YOL090W RME1P32338 300 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W HXT3P32466 567 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W SFA1P32771 386 aa3.2□□□□□ -1.9
MSH2YOL090W PGM1P33401 570 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W YBL028CP38202 106 aa3.2□□□□□ -1.9
MSH2YOL090W YHR112CP38716 378 aa3.2□□□□□ -1.9
MSH2YOL090W RIA1P53893 1110 aa3.2□□□□□ -1.9
MSH2YOL090W KAP120Q02932 1032 aa3.2□□□□□ -1.9
MSH2YOL090W DCI1Q08558 271 aa3.2□□□□□ -1.9
MSH2YOL090W GAL80P04387 435 aa3.2□□□□□ -1.9
MSH2YOL090W HOM2P13663 365 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W MER1P16523 270 aa3.2□□□□□ -1.9
MSH2YOL090W CAD1P24813 409 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W SPS22P25380 463 aa3.2□□□□□ -1.9
MSH2YOL090W NTG1P31378 399 aa3.2□□□□□ -1.9
MSH2YOL090W ARC19P33204 171 aaKnown RBP3.2□□□□□ -1.9
MSH2YOL090W SEC66P33754 206 aa3.2□□□□□ -1.9
MSH2YOL090W CMC1P36064 111 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms