RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A YCL049CP25577 312 aa3.42□□□□□ -1.86
SFT1YKL006C-A TRS65P32893 560 aa3.42□□□□□ -1.86
SFT1YKL006C-A RFC1P38630 861 aaKnown RBP3.42□□□□□ -1.86
SFT1YKL006C-A LEU5P38702 357 aa3.42□□□□□ -1.86
SFT1YKL006C-A IES5P40060 125 aa3.42□□□□□ -1.86
SFT1YKL006C-A IST3P40565 148 aaPredicted RBP3.42□□□□□ -1.86
SFT1YKL006C-A SWP82P43554 623 aa3.42□□□□□ -1.86
SFT1YKL006C-A CTL1Q03220 320 aaKnown RBP3.42□□□□□ -1.86
SFT1YKL006C-A ATG16Q03818 150 aa3.42□□□□□ -1.86
SFT1YKL006C-A TMA64Q04600 565 aaKnown RBP3.42□□□□□ -1.86
SFT1YKL006C-A APA1P16550 321 aaKnown RBP3.41□□□□□ -1.86
SFT1YKL006C-A SRB5P32585 307 aa3.41□□□□□ -1.86
SFT1YKL006C-A FMP46P36141 133 aaKnown RBP3.41□□□□□ -1.86
SFT1YKL006C-A ESL2P36168 1195 aa3.41□□□□□ -1.86
SFT1YKL006C-A ECM10P39987 644 aa3.41□□□□□ -1.86
SFT1YKL006C-A PFK26P40433 827 aaKnown RBP3.41□□□□□ -1.86
SFT1YKL006C-A SMK1P41808 388 aa3.41□□□□□ -1.86
SFT1YKL006C-A ATG27P46989 271 aa3.41□□□□□ -1.86
SFT1YKL006C-A HOS2P53096 452 aaPredicted RBP3.41□□□□□ -1.86
SFT1YKL006C-A NNF2P53253 936 aa3.41□□□□□ -1.86
SFT1YKL006C-A ARC35P53731 342 aaKnown RBP3.41□□□□□ -1.86
SFT1YKL006C-A UBX4P54730 416 aa3.41□□□□□ -1.86
SFT1YKL006C-A YLR352WQ06479 807 aa3.41□□□□□ -1.86
SFT1YKL006C-A EDE1P34216 1381 aa3.4□□□□□ -1.86
SFT1YKL006C-A PHO2P07269 559 aa3.4□□□□□ -1.87
SFT1YKL006C-A PGI1P12709 554 aaKnown RBP3.4□□□□□ -1.87
SFT1YKL006C-A KRS1P15180 591 aaKnown RBP3.4□□□□□ -1.87
SFT1YKL006C-A UBC1P21734 215 aaKnown RBP3.4□□□□□ -1.87
SFT1YKL006C-A DPB3P27344 201 aa3.4□□□□□ -1.87
SFT1YKL006C-A RPN2P32565 945 aaKnown RBP3.4□□□□□ -1.87
SFT1YKL006C-A UME6P39001 836 aa3.4□□□□□ -1.87
SFT1YKL006C-A YFR020WP43600 232 aa3.4□□□□□ -1.87
SFT1YKL006C-A YGR021WP53212 290 aa3.4□□□□□ -1.87
SFT1YKL006C-A YTP1P53584 459 aa3.4□□□□□ -1.87
SFT1YKL006C-A EKI1Q03764 534 aa3.4□□□□□ -1.87
SFT1YKL006C-A IFA38P38286 347 aa3.39□□□□□ -1.87
SFT1YKL006C-A ERP2P39704 215 aa3.39□□□□□ -1.87
SFT1YKL006C-A HXT9P40885 567 aa3.39□□□□□ -1.87
SFT1YKL006C-A IAH1P41734 238 aa3.39□□□□□ -1.87
SFT1YKL006C-A IST1P53843 298 aaPredicted RBP3.39□□□□□ -1.87
SFT1YKL006C-A CIA1Q05583 330 aa3.39□□□□□ -1.87
SFT1YKL006C-A YTH1Q06102 208 aaPredicted RBP3.39□□□□□ -1.87
SFT1YKL006C-A CSR1Q06705 408 aaKnown RBP3.39□□□□□ -1.87
SFT1YKL006C-A YDL218WQ07629 317 aa3.39□□□□□ -1.87
SFT1YKL006C-A HXK2P04807 486 aaKnown RBP3.38□□□□□ -1.87
SFT1YKL006C-A BAR1P12630 587 aa3.38□□□□□ -1.87
SFT1YKL006C-A CDC23P16522 626 aa3.38□□□□□ -1.87
SFT1YKL006C-A DBF20P32328 564 aa3.38□□□□□ -1.87
SFT1YKL006C-A TEF4P36008 412 aaKnown RBP3.38□□□□□ -1.87
SFT1YKL006C-A EFM2P38347 419 aa3.38□□□□□ -1.87
SFT1YKL006C-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SFT1YKL006C-A CRZ1P53968 678 aa3.38□□□□□ -1.87
SFT1YKL006C-A REG1Q00816 1014 aa3.38□□□□□ -1.87
SFT1YKL006C-A RSF1Q05043 376 aa3.38□□□□□ -1.87
SFT1YKL006C-A NUS1Q12063 375 aa3.38□□□□□ -1.87
SFT1YKL006C-A YLR302CO13544 120 aa3.37□□□□□ -1.87
SFT1YKL006C-A MTF2P10849 440 aa3.37□□□□□ -1.87
SFT1YKL006C-A ERG8P24521 451 aa3.37□□□□□ -1.87
SFT1YKL006C-A CLB2P24869 491 aa3.37□□□□□ -1.87
SFT1YKL006C-A XRS2P33301 854 aa3.37□□□□□ -1.87
SFT1YKL006C-A PTH2P34222 208 aa3.37□□□□□ -1.87
SFT1YKL006C-A RTS2P40962 232 aa3.37□□□□□ -1.87
SFT1YKL006C-A RPN11P43588 306 aaKnown RBP3.37□□□□□ -1.87
SFT1YKL006C-A CUL3P53202 744 aa3.37□□□□□ -1.87
SFT1YKL006C-A SCW10Q04951 389 aa3.37□□□□□ -1.87
SFT1YKL006C-A COG4Q06096 861 aa3.37□□□□□ -1.87
SFT1YKL006C-A BSC1Q12140 328 aa3.37□□□□□ -1.87
SFT1YKL006C-A YOR019WQ99248 730 aa3.37□□□□□ -1.87
SFT1YKL006C-A CNS1P33313 385 aa3.36□□□□□ -1.87
SFT1YKL006C-A RIM2P38127 377 aa3.36□□□□□ -1.87
SFT1YKL006C-A YJL070CP40361 888 aa3.36□□□□□ -1.87
SFT1YKL006C-A YIL060WP40519 144 aa3.36□□□□□ -1.87
SFT1YKL006C-A MDG1P53885 366 aa3.36□□□□□ -1.87
SFT1YKL006C-A APL4Q12028 832 aa3.36□□□□□ -1.87
SFT1YKL006C-A CSR2Q12734 1121 aa3.36□□□□□ -1.87
SFT1YKL006C-A YMR230W-AQ3E7B5 62 aa3.36□□□□□ -1.87
SFT1YKL006C-A YML002WP0CF17 737 aa3.35□□□□□ -1.87
SFT1YKL006C-A SPE2P21182 396 aa3.35□□□□□ -1.87
SFT1YKL006C-A LCB1P25045 558 aaKnown RBP3.35□□□□□ -1.87
SFT1YKL006C-A GID7P25569 745 aa3.35□□□□□ -1.87
SFT1YKL006C-A SEC1P30619 724 aaKnown RBP3.35□□□□□ -1.87
SFT1YKL006C-A PRO3P32263 286 aaKnown RBP3.35□□□□□ -1.87
SFT1YKL006C-A MPE1P35728 441 aaKnown RBP3.35□□□□□ -1.87
SFT1YKL006C-A RIC1P40395 1056 aa3.35□□□□□ -1.87
SFT1YKL006C-A AZF1P41696 914 aa3.35□□□□□ -1.87
SFT1YKL006C-A SMC3P47037 1230 aa3.35□□□□□ -1.87
SFT1YKL006C-A YMR178WQ03219 274 aaKnown RBP3.35□□□□□ -1.87
SFT1YKL006C-A SSM4P40318 1319 aa3.35□□□□□ -1.87
SFT1YKL006C-A YBR085C-AO43137 85 aa3.34□□□□□ -1.87
SFT1YKL006C-A MRS6P32864 603 aaKnown RBP3.34□□□□□ -1.87
SFT1YKL006C-A ERG7P38604 731 aa3.34□□□□□ -1.87
SFT1YKL006C-A YIR014WP40570 242 aa3.34□□□□□ -1.87
SFT1YKL006C-A IME4P41833 600 aa3.34□□□□□ -1.87
SFT1YKL006C-A DPB11P47027 764 aaPredicted RBP3.34□□□□□ -1.87
SFT1YKL006C-A CTF18P49956 741 aa3.34□□□□□ -1.87
SFT1YKL006C-A PSR2Q07949 397 aa3.34□□□□□ -1.87
SFT1YKL006C-A RDR1Q08904 546 aa3.34□□□□□ -1.87
SFT1YKL006C-A VCX1Q99385 411 aa3.34□□□□□ -1.87
SFT1YKL006C-A PDA1P16387 420 aaKnown RBP3.33□□□□□ -1.88
SFT1YKL006C-A GLN3P18494 730 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms