RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YCR006CP25350 157 aa2.28□□□□□ -2.04
VPS35YJL154C GSH1P32477 678 aa2.28□□□□□ -2.04
VPS35YJL154C YKL050CP35736 922 aa2.28□□□□□ -2.04
VPS35YJL154C UBP13P38187 747 aa2.28□□□□□ -2.04
VPS35YJL154C REG2P38232 338 aa2.28□□□□□ -2.04
VPS35YJL154C VRG4P40107 337 aa2.28□□□□□ -2.04
VPS35YJL154C ATF1P40353 525 aa2.28□□□□□ -2.04
VPS35YJL154C RPS7BP48164 190 aaKnown RBP2.28□□□□□ -2.04
VPS35YJL154C UBP8P50102 471 aa2.28□□□□□ -2.04
VPS35YJL154C RCN2Q12044 265 aa2.28□□□□□ -2.04
VPS35YJL154C STV1P37296 890 aa2.28□□□□□ -2.04
VPS35YJL154C RBG2P53295 368 aaKnown RBP2.28□□□□□ -2.04
VPS35YJL154C YML037CQ03703 340 aa2.28□□□□□ -2.04
VPS35YJL154C MCH4Q08268 501 aa2.28□□□□□ -2.04
VPS35YJL154C MED1Q12321 566 aa2.28□□□□□ -2.04
VPS35YJL154C Q0010Q9ZZX9 128 aa2.28□□□□□ -2.04
VPS35YJL154C HAP1P0CE41 1502 aa2.28□□□□□ -2.04
VPS35YJL154C SCC2Q04002 1493 aa2.28□□□□□ -2.04
VPS35YJL154C TOR1P35169 2470 aa2.28□□□□□ -2.05
VPS35YJL154C CET1O13297 549 aaPredicted RBP2.27□□□□□ -2.05
VPS35YJL154C HSC82P15108 705 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C LCB1P25045 558 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C ECM10P39987 644 aa2.27□□□□□ -2.05
VPS35YJL154C NDE1P40215 560 aa2.27□□□□□ -2.05
VPS35YJL154C ARF3P40994 183 aaRIP-Chip data2.27□□□□□ -2.05not detected
VPS35YJL154C DPB11P47027 764 aaPredicted RBP2.27□□□□□ -2.05
VPS35YJL154C SEG1Q04279 960 aa2.27□□□□□ -2.05
VPS35YJL154C YNL162W-AQ3E7A8 72 aa2.27□□□□□ -2.05
VPS35YJL154C NUP170P38181 1502 aa2.27□□□□□ -2.05
VPS35YJL154C GCN4P03069 281 aa2.27□□□□□ -2.05
VPS35YJL154C APN1P22936 367 aa2.27□□□□□ -2.05
VPS35YJL154C YCK1P23291 538 aa2.27□□□□□ -2.05
VPS35YJL154C SGF29P25554 259 aa2.27□□□□□ -2.05
VPS35YJL154C POL4P25615 582 aa2.27□□□□□ -2.05
VPS35YJL154C COQ3P27680 312 aa2.27□□□□□ -2.05
VPS35YJL154C IMP2'P32351 346 aa2.27□□□□□ -2.05
VPS35YJL154C CIN1P40987 1014 aa2.27□□□□□ -2.05
VPS35YJL154C SWP82P43554 623 aa2.27□□□□□ -2.05
VPS35YJL154C PTR3P43606 678 aa2.27□□□□□ -2.05
VPS35YJL154C SMC3P47037 1230 aa2.27□□□□□ -2.05
VPS35YJL154C SPC19Q03954 165 aa2.27□□□□□ -2.05
VPS35YJL154C GPN2Q08726 347 aaPredicted RBP2.27□□□□□ -2.05
VPS35YJL154C TAH18Q12181 623 aa2.27□□□□□ -2.05
VPS35YJL154C YRF1-1P0CX20 1796 aa2.27□□□□□ -2.05
VPS35YJL154C YRF1-5P0CX21 1796 aa2.27□□□□□ -2.05
VPS35YJL154C YRF1-8P0CX22 1796 aa2.27□□□□□ -2.05
VPS35YJL154C PGK1P00560 416 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C PTP1P25044 335 aa2.27□□□□□ -2.05
VPS35YJL154C PGS1P25578 521 aa2.27□□□□□ -2.05
VPS35YJL154C CMK1P27466 446 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C AUR1P36107 401 aaPredicted RBP2.27□□□□□ -2.05
VPS35YJL154C FLO10P36170 1169 aa2.27□□□□□ -2.05
VPS35YJL154C IMD2P38697 523 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C XBP1P40489 647 aa2.27□□□□□ -2.05
VPS35YJL154C PKP1P40530 394 aa2.27□□□□□ -2.05
VPS35YJL154C YFR020WP43600 232 aa2.27□□□□□ -2.05
VPS35YJL154C SIP4P46954 829 aa2.27□□□□□ -2.05
VPS35YJL154C CTK2P46962 323 aa2.27□□□□□ -2.05
VPS35YJL154C IMD3P50095 523 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C PIL1P53252 339 aaKnown RBP2.27□□□□□ -2.05
VPS35YJL154C YPR003CP53394 754 aa2.27□□□□□ -2.05
VPS35YJL154C RIM13Q03792 727 aa2.27□□□□□ -2.05
VPS35YJL154C THI7Q05998 598 aa2.27□□□□□ -2.05
VPS35YJL154C YSP3P25036 478 aa2.26□□□□□ -2.05
VPS35YJL154C ADH7P25377 361 aa2.26□□□□□ -2.05
VPS35YJL154C YIH1P25637 258 aa2.26□□□□□ -2.05
VPS35YJL154C OCT1P35999 772 aa2.26□□□□□ -2.05
VPS35YJL154C DIA4P38705 446 aaPredicted RBP2.26□□□□□ -2.05
VPS35YJL154C YNG2P38806 282 aaKnown RBP2.26□□□□□ -2.05
VPS35YJL154C IRC8P47046 822 aa2.26□□□□□ -2.05
VPS35YJL154C VPS25P47142 202 aa2.26□□□□□ -2.05
VPS35YJL154C VID30P53076 958 aa2.26□□□□□ -2.05
VPS35YJL154C STR3P53101 465 aaKnown RBP2.26□□□□□ -2.05
VPS35YJL154C YGL036WP53185 909 aaPredicted RBP2.26□□□□□ -2.05
VPS35YJL154C YGR127WP53275 312 aa2.26□□□□□ -2.05
VPS35YJL154C IDP3P53982 420 aaKnown RBP2.26□□□□□ -2.05
VPS35YJL154C ECM22Q05958 814 aaPredicted RBP2.26□□□□□ -2.05
VPS35YJL154C INP53Q12271 1107 aa2.26□□□□□ -2.05
VPS35YJL154C NDJ1Q12366 352 aa2.26□□□□□ -2.05
VPS35YJL154C RTP1Q12751 981 aa2.26□□□□□ -2.05
VPS35YJL154C DNF3Q12674 1656 aa2.26□□□□□ -2.05
VPS35YJL154C PDB1P32473 366 aaKnown RBP2.26□□□□□ -2.05
VPS35YJL154C ICS2P38284 255 aa2.26□□□□□ -2.05
VPS35YJL154C ARN1P38731 627 aa2.26□□□□□ -2.05
VPS35YJL154C FLC2P39719 783 aa2.26□□□□□ -2.05
VPS35YJL154C ERV46P39727 415 aa2.26□□□□□ -2.05
VPS35YJL154C FMP10P40098 244 aa2.26□□□□□ -2.05
VPS35YJL154C DSD1P53095 428 aa2.26□□□□□ -2.05
VPS35YJL154C COQ11Q05892 277 aa2.26□□□□□ -2.05
VPS35YJL154C RRI1Q12468 440 aa2.26□□□□□ -2.05
VPS35YJL154C YLR111WQ12528 110 aa2.26□□□□□ -2.05
VPS35YJL154C MF(ALPHA)1P01149 165 aa2.25□□□□□ -2.05
VPS35YJL154C PCT1P13259 424 aa2.25□□□□□ -2.05
VPS35YJL154C GEX2P36173 615 aa2.25□□□□□ -2.05
VPS35YJL154C DBP8P38719 431 aa2.25□□□□□ -2.05
VPS35YJL154C UIP3P39547 235 aa2.25□□□□□ -2.05
VPS35YJL154C ULP2P40537 1034 aaPredicted RBP2.25□□□□□ -2.05
VPS35YJL154C PSA1P41940 361 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C NMD5P46970 1048 aa2.25□□□□□ -2.05
VPS35YJL154C SRB7P47822 140 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms