RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	SWP82	P43554	623 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	FET5	P43561	622 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	YTP1	P53584	459 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	MLC2	Q06580	163 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	DAP1	Q12091	152 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	SWT1	Q12104	458 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	MIS1	P09440	975 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	CLB2	P24869	491 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	YKL133C	P36066	463 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	NTR2	P36118	322 aa	Predicted RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	RIM2	P38127	377 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	RFC1	P38630	861 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	PUG1	P40100	303 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	HIS6	P40545	261 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	CTK2	P46962	323 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	DCP2	P53550	970 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	CTL1	Q03220	320 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	TRS130	Q03660	1102 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	ARP10	Q04549	284 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	RSF1	Q05043	376 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	CRN1	Q06440	651 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	TMA7	Q3E764	64 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	ATP2	P00830	511 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	RAP1	P11938	827 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	NCP1	P16603	691 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	GLN3	P18494	730 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	CLB4	P24871	460 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	SAC1	P32368	623 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	LHS1	P36016	881 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	AAP1	P37898	856 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	ECM10	P39987	644 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YIL161W	P40449	235 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	YIR014W	P40570	242 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	IAH1	P41734	238 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YJL132W	P47014	750 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	PCD1	Q12524	340 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	MRS3	P10566	314 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	PGI1	P12709	554 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	SPO16	P17122	198 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	SOF1	P33750	489 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	ARP1	P38696	384 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	SEC31	P38968	1273 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	MRX1	P40050	688 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YIL060W	P40519	144 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YPI1	P43587	155 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YFR020W	P43600	232 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	CSL4	P53859	292 aa	Predicted RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	RSM28	Q03430	361 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YDL218W	Q07629	317 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	YOL159C	Q08300	171 aa		0.72	□□□□□ -2.29
NNF2	YGR089W	RRP6	Q12149	733 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	PDR15	Q04182	1529 aa	Known RBP	0.72	□□□□□ -2.29
NNF2	YGR089W	RPB8	P20436	146 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	GID7	P25569	745 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	PTP2	P29461	750 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	SRB5	P32585	307 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	STV1	P37296	890 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	RRP3	P38712	501 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	YHL041W	P38730	149 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	RTS1	P38903	757 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	PHO90	P39535	881 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	YER130C	P39959	443 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	RPT2	P40327	437 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	RPN11	P43588	306 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	GUF1	P46943	645 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	PKP2	P53170	491 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	ARC35	P53731	342 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	YNR061C	P53747	219 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	NUP100	Q02629	959 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TMA64	Q04600	565 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	TLG2	Q08144	397 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	YOL057W	Q08225	711 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	GSC2	P40989	1895 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-LR1	P0C2J4	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-F	P0CX61	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-GR2	P0CX62	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	KRS1	P15180	591 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-C	P25383	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	YCL049C	P25577	312 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	GAC1	P28006	793 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	LOS1	P33418	1100 aa	Predicted RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	MSN2	P33748	704 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	NUP120	P35729	1037 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	SPC34	P36131	295 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	DRE2	P36152	348 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	ERG7	P38604	731 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	MDM31	P38880	579 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	VPS27	P40343	622 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	ASE1	P50275	885 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TAN1	P53072	289 aa	Predicted RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	COG1	P53079	417 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	YMR178W	Q03219	274 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-DR2	Q03483	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	CIA1	Q05583	330 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	ADE13	Q05911	482 aa	Known RBP	0.71	□□□□□ -2.3
NNF2	YGR089W	TFC6	Q06339	672 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TMA16	Q08687	178 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	ATG9	Q12142	997 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	TY2A-B	Q12260	438 aa		0.71	□□□□□ -2.3
NNF2	YGR089W	COX17	Q12287	69 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms