RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	RIA1	P53893	1110 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	NCS2	P53923	493 aa	Predicted RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	KAP120	Q02932	1032 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	RSM28	Q03430	361 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	UFO1	Q04511	668 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	VTA1	Q06263	330 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	KEL3	Q08979	651 aa	Predicted RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	YPL272C	Q08984	517 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	TGS1	Q12052	315 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	REX3	Q12090	404 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	BAG7	Q12128	409 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	USV1	Q12132	391 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	SKS1	Q12505	502 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	TY1B-A	O13527	1196 aa	Known RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	MF(ALPHA)1	P01149	165 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	SIR3	P06701	978 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	YML002W	P0CF17	737 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	YPK1	P12688	680 aa	Known RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	RPL3	P14126	387 aa	Known RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	PDA1	P16387	420 aa	Known RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	APN1	P22936	367 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	YHR097C	P38809	366 aa	Known RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	MTG2	P38860	518 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	MAM1	P40065	302 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	ALG5	P40350	334 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	DIA3	P52290	468 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	BUD17	P53727	317 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	RPA49	Q01080	415 aa	Predicted RBP	5.82	□□□□□ -1.48
SNF11	YDR073W	YDR109C	Q04585	715 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	MLH3	Q12083	715 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	ISN1	Q99312	450 aa		5.82	□□□□□ -1.48
SNF11	YDR073W	COX1	P00401	534 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	RPS13	P05756	151 aa	Known RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	KGD2	P19262	463 aa	Predicted RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	RRP43	P25359	394 aa	Predicted RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	ADH7	P25377	361 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	MSP1	P28737	362 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	NTR2	P36118	322 aa	Predicted RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	UIP5	P36137	443 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	RRF1	P38771	230 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	PKP1	P40530	394 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	SWP82	P43554	623 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	MDE1	P47095	244 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	IMD4	P50094	524 aa	Known RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	INP52	P50942	1183 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	YIP4	P53093	235 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	YGR151C	P53287	111 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	RPS15	Q01855	142 aa	Known RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	ADA2	Q02336	434 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	TMA10	Q06177	86 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	CRT10	Q08226	957 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	RKI1	Q12189	258 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	RPN5	Q12250	445 aa	Known RBP	5.81	□□□□□ -1.48
SNF11	YDR073W	LAS17	Q12446	633 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	DFG16	Q99234	619 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	AI5_ALPHA	Q9ZZX1	630 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	SGS1	P35187	1447 aa		5.81	□□□□□ -1.48
SNF11	YDR073W	HXK2	P04807	486 aa	Known RBP	5.8	□□□□□ -1.48
SNF11	YDR073W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
SNF11	YDR073W	CNE1	P27825	502 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	MRE11	P32829	692 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	WBP1	P33767	430 aa	Known RBP	5.8	□□□□□ -1.48
SNF11	YDR073W	HCS1	P34243	683 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	MNN2	P38069	597 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	ATF1	P40353	525 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	NPA3	P47122	385 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	YGR111W	P53265	400 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	IPI3	P53877	555 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	UBP16	Q02863	499 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	TRS23	Q03784	219 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	FIN1	Q03898	291 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	SOV1	Q04748	898 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	YDL242W	Q07746	117 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	CFT2	Q12102	859 aa	Predicted RBP	5.8	□□□□□ -1.48
SNF11	YDR073W	RLM1	Q12224	676 aa		5.8	□□□□□ -1.48
SNF11	YDR073W	TPK2	P06245	380 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	SUI2	P20459	304 aa	Known RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	LIP5	P32875	414 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	SOF1	P33750	489 aa	Known RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	LTV1	P34078	463 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	HES1	P35843	434 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	AAP1	P37898	856 aa	Known RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	DIA4	P38705	446 aa	Predicted RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	SEC31	P38968	1273 aa	Known RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	LAS21	P40367	830 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	MSY1	P48527	492 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	NMA2	P53204	395 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	TOF1	P53840	1238 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	YLR456W	Q06199	204 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	RRP9	Q06506	573 aa	Known RBP	5.79	□□□□□ -1.48
SNF11	YDR073W	DCI1	Q08558	271 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	SEC39	Q12745	709 aa		5.79	□□□□□ -1.48
SNF11	YDR073W	AAC1	P04710	309 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	AMD2	P22580	549 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	PHO84	P25297	587 aa	Known RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	LAC1	P28496	418 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	SSE2	P32590	693 aa	Known RBP	5.78	□□□□□ -1.48
SNF11	YDR073W	SEC66	P33754	206 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	LST4	P34239	828 aa		5.78	□□□□□ -1.48
SNF11	YDR073W	HEL1	P36113	551 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms