RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W ERG27Q12452 347 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W YER175W-AQ8TGU4 54 aa2.33□□□□□ -2.04
RRP6YOR001W YLR358CO13565 187 aa2.32□□□□□ -2.04
RRP6YOR001W DFR1P07807 211 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RRP6YOR001W PDE1P22434 369 aa2.32□□□□□ -2.04
RRP6YOR001W RRP7P25368 297 aaPredicted RBP2.32□□□□□ -2.04
RRP6YOR001W BUD14P27637 709 aa2.32□□□□□ -2.04
RRP6YOR001W SYN8P31377 255 aa2.32□□□□□ -2.04
RRP6YOR001W TIF3P34167 436 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W HES1P35843 434 aa2.32□□□□□ -2.04
RRP6YOR001W KTR3P38130 404 aaPredicted RBP2.32□□□□□ -2.04
RRP6YOR001W THI2P38141 450 aa2.32□□□□□ -2.04
RRP6YOR001W YNG2P38806 282 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W GIP4P39732 760 aa2.32□□□□□ -2.04
RRP6YOR001W TCB2P48231 1178 aa2.32□□□□□ -2.04
RRP6YOR001W NMA2P53204 395 aa2.32□□□□□ -2.04
RRP6YOR001W YGR066CP53242 292 aa2.32□□□□□ -2.04
RRP6YOR001W RIA1P53893 1110 aa2.32□□□□□ -2.04
RRP6YOR001W YLR040CQ07988 224 aa2.32□□□□□ -2.04
RRP6YOR001W PCL8Q08966 492 aa2.32□□□□□ -2.04
RRP6YOR001W ATG9Q12142 997 aa2.32□□□□□ -2.04
RRP6YOR001W CHO2P05374 869 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W STE50P25344 346 aa2.32□□□□□ -2.04
RRP6YOR001W PEP3P27801 918 aa2.32□□□□□ -2.04
RRP6YOR001W GCD7P32502 381 aaPredicted RBP2.32□□□□□ -2.04
RRP6YOR001W GDA1P32621 518 aa2.32□□□□□ -2.04
RRP6YOR001W WBP1P33767 430 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W KES1P35844 434 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W NTR2P36118 322 aaPredicted RBP2.32□□□□□ -2.04
RRP6YOR001W KSP1P38691 1029 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W MIT1P40002 666 aa2.32□□□□□ -2.04
RRP6YOR001W SKP2P42843 763 aa2.32□□□□□ -2.04
RRP6YOR001W PHO23P50947 330 aa2.32□□□□□ -2.04
RRP6YOR001W STR3P53101 465 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W YAT1P80235 687 aa2.32□□□□□ -2.04
RRP6YOR001W UBP16Q02863 499 aa2.32□□□□□ -2.04
RRP6YOR001W HOT1Q03213 719 aa2.32□□□□□ -2.04
RRP6YOR001W UFO1Q04511 668 aa2.32□□□□□ -2.04
RRP6YOR001W AIM32Q04689 311 aa2.32□□□□□ -2.04
RRP6YOR001W RBS1Q05672 457 aaKnown RBP2.32□□□□□ -2.04
RRP6YOR001W CRN1Q06440 651 aa2.32□□□□□ -2.04
RRP6YOR001W COX1P00401 534 aa2.31□□□□□ -2.04
RRP6YOR001W AAC1P04710 309 aa2.31□□□□□ -2.04
RRP6YOR001W SES1P07284 462 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W STE12P13574 688 aa2.31□□□□□ -2.04
RRP6YOR001W KGD1P20967 1014 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W CLB1P24868 471 aa2.31□□□□□ -2.04
RRP6YOR001W ERG4P25340 473 aa2.31□□□□□ -2.04
RRP6YOR001W HIS7P33734 552 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W SEC66P33754 206 aa2.31□□□□□ -2.04
RRP6YOR001W UBP11P36026 717 aa2.31□□□□□ -2.04
RRP6YOR001W REV7P38927 245 aa2.31□□□□□ -2.04
RRP6YOR001W YIL166CP40445 542 aa2.31□□□□□ -2.04
RRP6YOR001W RPN11P43588 306 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W MNN10P50108 393 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W MCM6P53091 1017 aaKnown RBP2.31□□□□□ -2.04
RRP6YOR001W MFM1Q02783 413 aa2.31□□□□□ -2.04
RRP6YOR001W ISA2Q12425 185 aa2.31□□□□□ -2.04
RRP6YOR001W AI5_ALPHAQ9ZZX1 630 aa2.31□□□□□ -2.04
RRP6YOR001W YRF1-4O13559 1382 aa2.31□□□□□ -2.04
RRP6YOR001W LAM4P38800 1345 aa2.3□□□□□ -2.04
RRP6YOR001W YPK1P12688 680 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W KRS1P15180 591 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W CLB3P24870 427 aa2.3□□□□□ -2.04
RRP6YOR001W AAD3P25612 363 aa2.3□□□□□ -2.04
RRP6YOR001W AAP1P37898 856 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W REG2P38232 338 aa2.3□□□□□ -2.04
RRP6YOR001W VID24P38263 362 aa2.3□□□□□ -2.04
RRP6YOR001W PHM8P40025 321 aa2.3□□□□□ -2.04
RRP6YOR001W LCB2P40970 561 aa2.3□□□□□ -2.04
RRP6YOR001W THI6P41835 540 aa2.3□□□□□ -2.04
RRP6YOR001W BUD27P43573 796 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
RRP6YOR001W APT1P49435 187 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W BTN2P53286 410 aa2.3□□□□□ -2.04
RRP6YOR001W SMX3P54999 86 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W TAP42Q04372 366 aa2.3□□□□□ -2.04
RRP6YOR001W RQC1Q05468 723 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W SWA2Q06677 668 aa2.3□□□□□ -2.04
RRP6YOR001W CUE5Q08412 411 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W BMS1Q08965 1183 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W BAG7Q12128 409 aa2.3□□□□□ -2.04
RRP6YOR001W NTO1Q12311 748 aa2.3□□□□□ -2.04
RRP6YOR001W PDH1Q12428 516 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W SKS1Q12505 502 aa2.3□□□□□ -2.04
RRP6YOR001W PAR32Q12515 295 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W YBR085C-AO43137 85 aa2.3□□□□□ -2.04
RRP6YOR001W PPR1P07272 904 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W ALG7P07286 448 aa2.3□□□□□ -2.04
RRP6YOR001W ELO2P25358 347 aa2.3□□□□□ -2.04
RRP6YOR001W RRP43P25359 394 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W PRD1P25375 712 aa2.3□□□□□ -2.04
RRP6YOR001W YIH1P25637 258 aa2.3□□□□□ -2.04
RRP6YOR001W POT1P27796 417 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
RRP6YOR001W MRE11P32829 692 aa2.3□□□□□ -2.04
RRP6YOR001W MDL1P33310 695 aa2.3□□□□□ -2.04
RRP6YOR001W TCD2P36101 447 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W PPS1P38148 807 aa2.3□□□□□ -2.04
RRP6YOR001W DOT5P40553 215 aa2.3□□□□□ -2.04
RRP6YOR001W MAF1P41910 395 aa2.3□□□□□ -2.04
RRP6YOR001W CCT7P42943 550 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms