RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C RTC1Q08281 1341 aa3.61□□□□□ -1.83
VPS33YLR396C RAV1P47104 1357 aa3.61□□□□□ -1.83
VPS33YLR396C CDC25P04821 1589 aa3.61□□□□□ -1.83
VPS33YLR396C BUD3P25558 1636 aa3.61□□□□□ -1.83
VPS33YLR396C SPO14P36126 1683 aa3.61□□□□□ -1.83
VPS33YLR396C HOM2P13663 365 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C SRP54P20424 541 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C GCD7P32502 381 aaPredicted RBP3.61□□□□□ -1.83
VPS33YLR396C BUD27P43573 796 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
VPS33YLR396C RRP46P53256 223 aaPredicted RBP3.61□□□□□ -1.83
VPS33YLR396C CSL4P53859 292 aaPredicted RBP3.61□□□□□ -1.83
VPS33YLR396C MRS2Q01926 470 aa3.61□□□□□ -1.83
VPS33YLR396C SML1Q04964 104 aa3.61□□□□□ -1.83
VPS33YLR396C RAD34Q06665 692 aa3.61□□□□□ -1.83
VPS33YLR396C COX17Q12287 69 aa3.61□□□□□ -1.83
VPS33YLR396C RDL1Q12305 139 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C PDR11P40550 1411 aa3.61□□□□□ -1.83
VPS33YLR396C MLP1Q02455 1875 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C PSK1P31374 1356 aa3.6□□□□□ -1.83
VPS33YLR396C SNF1P06782 633 aaKnown RBP3.6□□□□□ -1.83
VPS33YLR396C MFT1P33441 392 aaKnown RBP3.6□□□□□ -1.83
VPS33YLR396C HES1P35843 434 aa3.6□□□□□ -1.83
VPS33YLR396C IML2P47031 731 aa3.6□□□□□ -1.83
VPS33YLR396C PSP1P50896 841 aaKnown RBP3.6□□□□□ -1.83
VPS33YLR396C COQ11Q05892 277 aa3.6□□□□□ -1.83
VPS33YLR396C VID22Q05934 901 aa3.6□□□□□ -1.83
VPS33YLR396C ATG23Q06671 453 aa3.6□□□□□ -1.83
VPS33YLR396C TRM8Q12009 286 aa3.6□□□□□ -1.83
VPS33YLR396C DRS2P39524 1355 aa3.6□□□□□ -1.83
VPS33YLR396C COX1P00401 534 aa3.59□□□□□ -1.83
VPS33YLR396C TOP1P04786 769 aa3.59□□□□□ -1.83
VPS33YLR396C YML003WP0CF16 290 aa3.59□□□□□ -1.83
VPS33YLR396C LRE1P25579 583 aaKnown RBP3.59□□□□□ -1.83
VPS33YLR396C APD1P38281 316 aa3.59□□□□□ -1.83
VPS33YLR396C RTR1P40084 226 aaPredicted RBP3.59□□□□□ -1.83
VPS33YLR396C NNF2P53253 936 aa3.59□□□□□ -1.83
VPS33YLR396C YAT1P80235 687 aa3.59□□□□□ -1.83
VPS33YLR396C SSP2Q08646 371 aa3.59□□□□□ -1.83
VPS33YLR396C PLP2Q12017 286 aa3.59□□□□□ -1.83
VPS33YLR396C YNL162W-AQ3E7A8 72 aa3.59□□□□□ -1.83
VPS33YLR396C KRE5P22023 1365 aa3.59□□□□□ -1.83
VPS33YLR396C ATP2P00830 511 aaKnown RBP3.59□□□□□ -1.83
VPS33YLR396C TPK1P06244 397 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-LR1P0C2J4 438 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-FP0CX61 438 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-GR2P0CX62 438 aa3.59□□□□□ -1.83
VPS33YLR396C ERG11P10614 530 aa3.59□□□□□ -1.83
VPS33YLR396C SPE2P21182 396 aa3.59□□□□□ -1.83
VPS33YLR396C MAK32P23060 363 aa3.59□□□□□ -1.83
VPS33YLR396C MBR1P23493 339 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-CP25383 438 aa3.59□□□□□ -1.83
VPS33YLR396C LAC1P28496 418 aa3.59□□□□□ -1.83
VPS33YLR396C ESL2P36168 1195 aa3.59□□□□□ -1.83
VPS33YLR396C GDT1P38301 280 aaPredicted RBP3.59□□□□□ -1.83
VPS33YLR396C RTT107P38850 1070 aa3.59□□□□□ -1.83
VPS33YLR396C COG1P53079 417 aa3.59□□□□□ -1.83
VPS33YLR396C HST1P53685 503 aa3.59□□□□□ -1.83
VPS33YLR396C VPS72Q03388 795 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-DR2Q03483 438 aa3.59□□□□□ -1.83
VPS33YLR396C VPS20Q04272 221 aa3.59□□□□□ -1.83
VPS33YLR396C BSP1Q06604 576 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-BQ12260 438 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-OR2Q12293 438 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-DR1Q12392 438 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-OR1Q12439 438 aa3.59□□□□□ -1.83
VPS33YLR396C YLR111WQ12528 110 aa3.59□□□□□ -1.83
VPS33YLR396C TY2A-DR3Q99303 438 aa3.59□□□□□ -1.83
VPS33YLR396C RPO21P04050 1733 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C RAD16P31244 790 aa3.58□□□□□ -1.84
VPS33YLR396C GSH1P32477 678 aa3.58□□□□□ -1.84
VPS33YLR396C MPE1P35728 441 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C NUP120P35729 1037 aa3.58□□□□□ -1.84
VPS33YLR396C SWH1P35845 1188 aa3.58□□□□□ -1.84
VPS33YLR396C MRPL10P36520 322 aa3.58□□□□□ -1.84
VPS33YLR396C UBP7P40453 1071 aa3.58□□□□□ -1.84
VPS33YLR396C RSM25P40496 264 aa3.58□□□□□ -1.84
VPS33YLR396C MSY1P48527 492 aa3.58□□□□□ -1.84
VPS33YLR396C YNL058CP53947 316 aa3.58□□□□□ -1.84
VPS33YLR396C HEF3P53978 1044 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C AAT1Q01802 451 aa3.58□□□□□ -1.84
VPS33YLR396C GRX3Q03835 250 aa3.58□□□□□ -1.84
VPS33YLR396C SWT1Q12104 458 aa3.58□□□□□ -1.84
VPS33YLR396C YSP2Q06681 1438 aa3.58□□□□□ -1.84
VPS33YLR396C NUP192P47054 1683 aa3.58□□□□□ -1.84
VPS33YLR396C BI2P03873 423 aa3.58□□□□□ -1.84
VPS33YLR396C SPO16P17122 198 aa3.58□□□□□ -1.84
VPS33YLR396C RFA2P26754 273 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C SWI3P32591 825 aa3.58□□□□□ -1.84
VPS33YLR396C ORC2P32833 620 aa3.58□□□□□ -1.84
VPS33YLR396C VPS41P38959 992 aa3.58□□□□□ -1.84
VPS33YLR396C LGE1Q02796 332 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C TLG2Q08144 397 aa3.58□□□□□ -1.84
VPS33YLR396C LYS21Q12122 440 aaKnown RBP3.58□□□□□ -1.84
VPS33YLR396C BAG7Q12128 409 aa3.58□□□□□ -1.84
VPS33YLR396C FRE7Q12333 620 aa3.58□□□□□ -1.84
VPS33YLR396C IML1P47170 1584 aa3.57□□□□□ -1.84
VPS33YLR396C GUK1P15454 187 aaKnown RBP3.57□□□□□ -1.84
VPS33YLR396C YSP3P25036 478 aa3.57□□□□□ -1.84
VPS33YLR396C RAD51P25454 400 aa3.57□□□□□ -1.84
VPS33YLR396C PTC6P25646 442 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms