RNA–Protein interactions for RNA: YER148W

SPT15, Transcript of TATA-binding protein, yeast

Gene SPT15, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT15	YER148W	SSM4	P40318	1319 aa		4.28	□□□□□ -1.72
SPT15	YER148W	SPO16	P17122	198 aa		4.28	□□□□□ -1.72
SPT15	YER148W	LAC1	P28496	418 aa		4.28	□□□□□ -1.72
SPT15	YER148W	NUP120	P35729	1037 aa		4.28	□□□□□ -1.72
SPT15	YER148W	PSY4	P38193	441 aa		4.28	□□□□□ -1.72
SPT15	YER148W	FTH1	P38310	465 aa		4.28	□□□□□ -1.72
SPT15	YER148W	LTP1	P40347	161 aa		4.28	□□□□□ -1.72
SPT15	YER148W	ATP23	P53722	227 aa		4.28	□□□□□ -1.72
SPT15	YER148W	RIM13	Q03792	727 aa		4.28	□□□□□ -1.72
SPT15	YER148W	TOM1	Q03280	3268 aa		4.28	□□□□□ -1.72
SPT15	YER148W	RTC1	Q08281	1341 aa		4.27	□□□□□ -1.73
SPT15	YER148W	YML003W	P0CF16	290 aa		4.27	□□□□□ -1.73
SPT15	YER148W	EXO84	P38261	753 aa		4.27	□□□□□ -1.73
SPT15	YER148W	NMD5	P46970	1048 aa		4.27	□□□□□ -1.73
SPT15	YER148W	MSY1	P48527	492 aa		4.27	□□□□□ -1.73
SPT15	YER148W	GTR1	Q00582	310 aa		4.27	□□□□□ -1.73
SPT15	YER148W	SWT1	Q12104	458 aa		4.27	□□□□□ -1.73
SPT15	YER148W	PSK1	P31374	1356 aa		4.27	□□□□□ -1.73
SPT15	YER148W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.26	□□□□□ -1.73
SPT15	YER148W	COX1	P00401	534 aa		4.26	□□□□□ -1.73
SPT15	YER148W	ATP2	P00830	511 aa	Known RBP	4.26	□□□□□ -1.73
SPT15	YER148W	TRX2	P22803	104 aa	Known RBP	4.26	□□□□□ -1.73
SPT15	YER148W	PTC6	P25646	442 aa		4.26	□□□□□ -1.73
SPT15	YER148W	BEM3	P32873	1128 aa		4.26	□□□□□ -1.73
SPT15	YER148W	IFA38	P38286	347 aa		4.26	□□□□□ -1.73
SPT15	YER148W	YIL161W	P40449	235 aa	Known RBP	4.26	□□□□□ -1.73
SPT15	YER148W	SNO3	P43544	222 aa		4.26	□□□□□ -1.73
SPT15	YER148W	UBX6	P47049	396 aa		4.26	□□□□□ -1.73
SPT15	YER148W	ECM16	Q04217	1267 aa	Known RBP	4.26	□□□□□ -1.73
SPT15	YER148W	LEA1	Q08963	238 aa	Predicted RBP	4.26	□□□□□ -1.73
SPT15	YER148W	FRE7	Q12333	620 aa		4.26	□□□□□ -1.73
SPT15	YER148W	URB1	P34241	1764 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	TPK1	P06244	397 aa		4.25	□□□□□ -1.73
SPT15	YER148W	ILV2	P07342	687 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	NUP1	P20676	1076 aa		4.25	□□□□□ -1.73
SPT15	YER148W	RAD16	P31244	790 aa		4.25	□□□□□ -1.73
SPT15	YER148W	GSH1	P32477	678 aa		4.25	□□□□□ -1.73
SPT15	YER148W	IMD2	P38697	523 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	CIN1	P40987	1014 aa		4.25	□□□□□ -1.73
SPT15	YER148W	BNA3	P47039	444 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	BNA1	P47096	177 aa		4.25	□□□□□ -1.73
SPT15	YER148W	EAF6	P47128	113 aa		4.25	□□□□□ -1.73
SPT15	YER148W	IMD3	P50095	523 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	ASE1	P50275	885 aa		4.25	□□□□□ -1.73
SPT15	YER148W	PSP1	P50896	841 aa	Known RBP	4.25	□□□□□ -1.73
SPT15	YER148W	YPL071C	Q02864	156 aa		4.25	□□□□□ -1.73
SPT15	YER148W	YML122C	Q03207	126 aa		4.25	□□□□□ -1.73
SPT15	YER148W	TPO3	Q06451	622 aa		4.25	□□□□□ -1.73
SPT15	YER148W	COX17	Q12287	69 aa		4.25	□□□□□ -1.73
SPT15	YER148W	TY2A-LR1	P0C2J4	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-F	P0CX61	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-GR2	P0CX62	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-C	P25383	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	UBP7	P40453	1071 aa		4.24	□□□□□ -1.73
SPT15	YER148W	ULP2	P40537	1034 aa	Predicted RBP	4.24	□□□□□ -1.73
SPT15	YER148W	IML2	P47031	731 aa		4.24	□□□□□ -1.73
SPT15	YER148W	RRT6	P53117	311 aa	Predicted RBP	4.24	□□□□□ -1.73
SPT15	YER148W	IDP3	P53982	420 aa	Known RBP	4.24	□□□□□ -1.73
SPT15	YER148W	YML131W	Q03102	365 aa		4.24	□□□□□ -1.73
SPT15	YER148W	RSC9	Q03124	581 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-DR2	Q03483	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	VID22	Q05934	901 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-B	Q12260	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-OR2	Q12293	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-DR1	Q12392	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-OR1	Q12439	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	TY2A-DR3	Q99303	438 aa		4.24	□□□□□ -1.73
SPT15	YER148W	SNF1	P06782	633 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	ILS1	P09436	1072 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	PCT1	P13259	424 aa		4.23	□□□□□ -1.73
SPT15	YER148W	URE2	P23202	354 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	RFA2	P26754	273 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	KAP123	P40069	1113 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	IST3	P40565	148 aa	Predicted RBP	4.23	□□□□□ -1.73
SPT15	YER148W	IRC7	P43623	340 aa		4.23	□□□□□ -1.73
SPT15	YER148W	COG1	P53079	417 aa		4.23	□□□□□ -1.73
SPT15	YER148W	DCP2	P53550	970 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	ERG13	P54839	491 aa	Known RBP	4.23	□□□□□ -1.73
SPT15	YER148W	YDR109C	Q04585	715 aa		4.23	□□□□□ -1.73
SPT15	YER148W	STP3	Q05937	343 aa		4.23	□□□□□ -1.73
SPT15	YER148W	YOR389W	Q08912	624 aa		4.23	□□□□□ -1.73
SPT15	YER148W	PCD1	Q12524	340 aa		4.23	□□□□□ -1.73
SPT15	YER148W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SPT15	YER148W	YSP3	P25036	478 aa		4.22	□□□□□ -1.73
SPT15	YER148W	RPT3	P33298	428 aa	Known RBP	4.22	□□□□□ -1.73
SPT15	YER148W	TEF4	P36008	412 aa	Known RBP	4.22	□□□□□ -1.73
SPT15	YER148W	UME6	P39001	836 aa		4.22	□□□□□ -1.73
SPT15	YER148W	ERV46	P39727	415 aa		4.22	□□□□□ -1.73
SPT15	YER148W	SNU56	Q03782	492 aa	Known RBP	4.22	□□□□□ -1.73
SPT15	YER148W	THI3	Q07471	609 aa		4.22	□□□□□ -1.73
SPT15	YER148W	TRM8	Q12009	286 aa		4.22	□□□□□ -1.73
SPT15	YER148W	GET3	Q12154	354 aa	Known RBP	4.22	□□□□□ -1.73
SPT15	YER148W	TFC3	P34111	1160 aa		4.21	□□□□□ -1.74
SPT15	YER148W	RRN3	P36070	627 aa		4.21	□□□□□ -1.74
SPT15	YER148W	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
SPT15	YER148W	CDC1	P40986	491 aa		4.21	□□□□□ -1.74
SPT15	YER148W	PSA1	P41940	361 aa	Known RBP	4.21	□□□□□ -1.74
SPT15	YER148W	ORC5	P50874	479 aa		4.21	□□□□□ -1.74
SPT15	YER148W	ADE16	P54113	591 aa	Known RBP	4.21	□□□□□ -1.74
SPT15	YER148W	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms