RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	CTR1	P49573	406 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	UBC11	P52492	156 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	TWF1	P53250	332 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	BOP3	P53958	396 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	YAT1	P80235	687 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	SEC5	P89102	971 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	AAT1	Q01802	451 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	VTA1	Q06263	330 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	CRT10	Q08226	957 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	MCA1	Q08601	432 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	BUD7	Q08754	746 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	HSP42	Q12329	375 aa		4.93	□□□□□ -1.62
UBC1	YDR177W	DNA2	P38859	1522 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	TCB3	Q03640	1545 aa	Known RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	CET1	O13297	549 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	HXK2	P04807	486 aa	Known RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	STE12	P13574	688 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	ADH7	P25377	361 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	YBR053C	P38235	358 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	GDT1	P38301	280 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	FTH1	P38310	465 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	FMP52	P40008	231 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	LTP1	P40347	161 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	SEC24	P40482	926 aa	Known RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	PAN2	P53010	1115 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	MNP1	P53163	194 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	YGR079W	P53249	370 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	IST1	P53843	298 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	KAP120	Q02932	1032 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	YDL086W	Q07505	273 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	LUC7	Q07508	261 aa	Predicted RBP	4.92	□□□□□ -1.62
UBC1	YDR177W	AFI1	Q99222	893 aa		4.92	□□□□□ -1.62
UBC1	YDR177W	YML003W	P0CF16	290 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YML002W	P0CF17	737 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	SUI2	P20459	304 aa	Known RBP	4.91	□□□□□ -1.62
UBC1	YDR177W	APN1	P22936	367 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	STE11	P23561	717 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	CDC5	P32562	705 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	NIP100	P33420	868 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	PHO11	P35842	467 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	ELF1	P36053	145 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	PHO12	P38693	467 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	MRX1	P40050	688 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	ALG5	P40350	334 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	RPS0B	P46654	252 aa	Known RBP	4.91	□□□□□ -1.62
UBC1	YDR177W	FYV8	P46949	817 aa	Known RBP	4.91	□□□□□ -1.62
UBC1	YDR177W	LCL3	P53153	274 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	CUL3	P53202	744 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	IMO32	P53219	342 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YGR127W	P53275	312 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	RSM28	Q03430	361 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	USA1	Q03714	838 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	FIN1	Q03898	291 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YDR132C	Q03900	495 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	UFO1	Q04511	668 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	CRN1	Q06440	651 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	SKS1	Q12505	502 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YOL159C-A	Q3E769	90 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YML133C	Q03099	1374 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YLL067C	Q07888	1374 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	YLL066C	Q99208	1374 aa		4.91	□□□□□ -1.62
UBC1	YDR177W	TRP3	P00937	484 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	MF(ALPHA)1	P01149	165 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	GAL80	P04387	435 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	RPS13	P05756	151 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SIR3	P06701	978 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	SPE2	P21182	396 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	MSS1	P32559	526 aa	Predicted RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SOF1	P33750	489 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	HCS1	P34243	683 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	LHS1	P36016	881 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	PIH1	P38768	344 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	TIF4631	P39935	952 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	PKP1	P40530	394 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	HXT14	P42833	540 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	CAK1	P43568	368 aa	Predicted RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	FAR3	P46671	204 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	DLD2	P46681	530 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SAE2	P46946	345 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	CTK2	P46962	323 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	DIA3	P52290	468 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	BNI5	P53890	448 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	YNL144C	P53907	740 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	ERG5	P54781	538 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	ADA2	Q02336	434 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	GFD1	Q04839	188 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	MRD1	Q06106	887 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	MRI1	Q06489	411 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SWA2	Q06677	668 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	YDL073W	Q07454	984 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	ESC8	Q08119	714 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	CUE5	Q08412	411 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SPE3	Q12074	293 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	PRS5	Q12265	496 aa	Known RBP	4.9	□□□□□ -1.63
UBC1	YDR177W	SPE4	Q12455	300 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	CTF3	Q12748	733 aa		4.9	□□□□□ -1.63
UBC1	YDR177W	SOD2	P00447	233 aa		4.89	□□□□□ -1.63
UBC1	YDR177W	ARD1	P07347	238 aa	Predicted RBP	4.89	□□□□□ -1.63
UBC1	YDR177W	PDA1	P16387	420 aa	Known RBP	4.89	□□□□□ -1.63
UBC1	YDR177W	SPB1	P25582	841 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms