RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C PHM8P40025 321 aa3.51□□□□□ -1.85
SHG1YBR258C CTF18P49956 741 aa3.51□□□□□ -1.85
SHG1YBR258C CSL4P53859 292 aaPredicted RBP3.51□□□□□ -1.85
SHG1YBR258C MRPL13Q02204 264 aa3.51□□□□□ -1.85
SHG1YBR258C FMP30Q02883 468 aa3.51□□□□□ -1.85
SHG1YBR258C RAD34Q06665 692 aa3.51□□□□□ -1.85
SHG1YBR258C ATG23Q06671 453 aa3.51□□□□□ -1.85
SHG1YBR258C CYK3Q07533 885 aa3.51□□□□□ -1.85
SHG1YBR258C YPL191CQ08930 360 aa3.51□□□□□ -1.85
SHG1YBR258C PRS5Q12265 496 aaKnown RBP3.51□□□□□ -1.85
SHG1YBR258C GRX6Q12438 231 aa3.51□□□□□ -1.85
SHG1YBR258C IRA2P19158 3079 aa3.5□□□□□ -1.85
SHG1YBR258C AQY1P0CD91 305 aa3.5□□□□□ -1.85
SHG1YBR258C MRPL9P31334 269 aa3.5□□□□□ -1.85
SHG1YBR258C HES1P35843 434 aa3.5□□□□□ -1.85
SHG1YBR258C HOT13P36078 116 aa3.5□□□□□ -1.85
SHG1YBR258C PSY4P38193 441 aa3.5□□□□□ -1.85
SHG1YBR258C EXO84P38261 753 aa3.5□□□□□ -1.85
SHG1YBR258C APD1P38281 316 aa3.5□□□□□ -1.85
SHG1YBR258C LNP1P38878 278 aa3.5□□□□□ -1.85
SHG1YBR258C CIR1P42940 261 aa3.5□□□□□ -1.85
SHG1YBR258C SAE2P46946 345 aa3.5□□□□□ -1.85
SHG1YBR258C BNA1P47096 177 aa3.5□□□□□ -1.85
SHG1YBR258C YRB30P53107 440 aaPredicted RBP3.5□□□□□ -1.85
SHG1YBR258C GTR1Q00582 310 aa3.5□□□□□ -1.85
SHG1YBR258C UBP16Q02863 499 aa3.5□□□□□ -1.85
SHG1YBR258C CSR1Q06705 408 aaKnown RBP3.5□□□□□ -1.85
SHG1YBR258C AHA1Q12449 350 aaKnown RBP3.5□□□□□ -1.85
SHG1YBR258C AI5_ALPHAQ9ZZX1 630 aa3.5□□□□□ -1.85
SHG1YBR258C SEC3P33332 1336 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C RPL40AP0CH08 128 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C RPL40BP0CH09 128 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C TRX2P22803 104 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C LRE1P25579 583 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C SWC3P31376 625 aa3.49□□□□□ -1.85
SHG1YBR258C RPF2P36160 344 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C VBA2P38358 474 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C SAP1P39955 897 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C FAF1P40546 346 aaPredicted RBP3.49□□□□□ -1.85
SHG1YBR258C MTG1Q03151 367 aaPredicted RBP3.49□□□□□ -1.85
SHG1YBR258C ECM16Q04217 1267 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C PLM2Q04383 521 aa3.49□□□□□ -1.85
SHG1YBR258C BSP1Q06604 576 aa3.49□□□□□ -1.85
SHG1YBR258C DAP1Q12091 152 aa3.49□□□□□ -1.85
SHG1YBR258C RDL1Q12305 139 aaKnown RBP3.49□□□□□ -1.85
SHG1YBR258C FMP27Q06179 2628 aa3.48□□□□□ -1.85
SHG1YBR258C CET1O13297 549 aaPredicted RBP3.48□□□□□ -1.85
SHG1YBR258C LPD1P09624 499 aaKnown RBP3.48□□□□□ -1.85
SHG1YBR258C YML003WP0CF16 290 aa3.48□□□□□ -1.85
SHG1YBR258C MAK32P23060 363 aa3.48□□□□□ -1.85
SHG1YBR258C HSP104P31539 908 aaKnown RBP3.48□□□□□ -1.85
SHG1YBR258C MRPL36P36531 177 aa3.48□□□□□ -1.85
SHG1YBR258C IFA38P38286 347 aa3.48□□□□□ -1.85
SHG1YBR258C SMK1P41808 388 aa3.48□□□□□ -1.85
SHG1YBR258C BUD27P43573 796 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SHG1YBR258C TAX4P47030 604 aa3.48□□□□□ -1.85
SHG1YBR258C YGR079WP53249 370 aa3.48□□□□□ -1.85
SHG1YBR258C YAT1P80235 687 aa3.48□□□□□ -1.85
SHG1YBR258C YML131WQ03102 365 aa3.48□□□□□ -1.85
SHG1YBR258C LYS21Q12122 440 aaKnown RBP3.48□□□□□ -1.85
SHG1YBR258C BAG7Q12128 409 aa3.48□□□□□ -1.85
SHG1YBR258C RVB2Q12464 471 aaKnown RBP3.48□□□□□ -1.85
SHG1YBR258C YNL162W-AQ3E7A8 72 aa3.48□□□□□ -1.85
SHG1YBR258C PNO1Q99216 274 aaKnown RBP3.48□□□□□ -1.85
SHG1YBR258C IRA1P18963 3092 aa3.48□□□□□ -1.85
SHG1YBR258C LYS2P07702 1392 aa3.48□□□□□ -1.85
SHG1YBR258C SSM4P40318 1319 aa3.47□□□□□ -1.85
SHG1YBR258C ACC1Q00955 2233 aaKnown RBP3.47□□□□□ -1.85
SHG1YBR258C CBP1P07252 654 aa3.47□□□□□ -1.85
SHG1YBR258C HOM2P13663 365 aaKnown RBP3.47□□□□□ -1.85
SHG1YBR258C SPO16P17122 198 aa3.47□□□□□ -1.85
SHG1YBR258C OSM1P21375 501 aaKnown RBP3.47□□□□□ -1.85
SHG1YBR258C MTG2P38860 518 aa3.47□□□□□ -1.85
SHG1YBR258C DJP1P40564 432 aa3.47□□□□□ -1.85
SHG1YBR258C YFL040WP43562 540 aa3.47□□□□□ -1.85
SHG1YBR258C ZAP1P47043 880 aa3.47□□□□□ -1.85
SHG1YBR258C YJL043WP47053 257 aa3.47□□□□□ -1.85
SHG1YBR258C NPA3P47122 385 aa3.47□□□□□ -1.85
SHG1YBR258C BPL1P48445 690 aaPredicted RBP3.47□□□□□ -1.85
SHG1YBR258C MSY1P48527 492 aa3.47□□□□□ -1.85
SHG1YBR258C PSP1P50896 841 aaKnown RBP3.47□□□□□ -1.85
SHG1YBR258C YNL058CP53947 316 aa3.47□□□□□ -1.85
SHG1YBR258C YML053CQ04978 212 aa3.47□□□□□ -1.85
SHG1YBR258C VID22Q05934 901 aa3.47□□□□□ -1.85
SHG1YBR258C YLR111WQ12528 110 aa3.47□□□□□ -1.85
SHG1YBR258C SIR4P11978 1358 aa3.47□□□□□ -1.85
SHG1YBR258C PGK1P00560 416 aaKnown RBP3.46□□□□□ -1.86
SHG1YBR258C NUC1P08466 329 aa3.46□□□□□ -1.86
SHG1YBR258C TY2A-LR1P0C2J4 438 aa3.46□□□□□ -1.86
SHG1YBR258C TY2A-FP0CX61 438 aa3.46□□□□□ -1.86
SHG1YBR258C TY2A-GR2P0CX62 438 aa3.46□□□□□ -1.86
SHG1YBR258C PCT1P13259 424 aa3.46□□□□□ -1.86
SHG1YBR258C TY2A-CP25383 438 aa3.46□□□□□ -1.86
SHG1YBR258C LAC1P28496 418 aa3.46□□□□□ -1.86
SHG1YBR258C GCD7P32502 381 aaPredicted RBP3.46□□□□□ -1.86
SHG1YBR258C CBF2P32504 956 aa3.46□□□□□ -1.86
SHG1YBR258C SIP1P32578 815 aa3.46□□□□□ -1.86
SHG1YBR258C ORC2P32833 620 aa3.46□□□□□ -1.86
SHG1YBR258C BEM3P32873 1128 aa3.46□□□□□ -1.86
SHG1YBR258C FTH1P38310 465 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms