RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	YNL058C	P53947	316 aa		5	□□□□□ -1.61
YPK3	YBR028C	THI3	Q07471	609 aa		5	□□□□□ -1.61
YPK3	YBR028C	RIX7	Q07844	837 aa	Known RBP	5	□□□□□ -1.61
YPK3	YBR028C	ERG11	P10614	530 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	BPL1	P48445	690 aa	Predicted RBP	4.99	□□□□□ -1.61
YPK3	YBR028C	YPL071C	Q02864	156 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	IMH1	Q06704	911 aa	Known RBP	4.99	□□□□□ -1.61
YPK3	YBR028C	HSC82	P15108	705 aa	Known RBP	4.99	□□□□□ -1.61
YPK3	YBR028C	RPN12	P32496	274 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	SEC31	P38968	1273 aa	Known RBP	4.99	□□□□□ -1.61
YPK3	YBR028C	ASG1	P40467	964 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	SNU56	Q03782	492 aa	Known RBP	4.99	□□□□□ -1.61
YPK3	YBR028C	TPO3	Q06451	622 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	MED1	Q12321	566 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	YOR111W	Q99210	232 aa		4.99	□□□□□ -1.61
YPK3	YBR028C	PET111	P08468	800 aa		4.98	□□□□□ -1.61
YPK3	YBR028C	SUI3	P09064	285 aa	Known RBP	4.98	□□□□□ -1.61
YPK3	YBR028C	DUO1	P53168	247 aa	Known RBP	4.98	□□□□□ -1.61
YPK3	YBR028C	RSM28	Q03430	361 aa		4.98	□□□□□ -1.61
YPK3	YBR028C	SKG3	Q06315	1026 aa		4.98	□□□□□ -1.61
YPK3	YBR028C	TAD3	Q9URQ3	322 aa		4.98	□□□□□ -1.61
YPK3	YBR028C	YBR085C-A	O43137	85 aa		4.97	□□□□□ -1.61
YPK3	YBR028C	ECM10	P39987	644 aa		4.97	□□□□□ -1.61
YPK3	YBR028C	JHD1	P40034	492 aa		4.97	□□□□□ -1.61
YPK3	YBR028C	INA17	Q02888	182 aa		4.97	□□□□□ -1.61
YPK3	YBR028C	NDJ1	Q12366	352 aa		4.97	□□□□□ -1.61
YPK3	YBR028C	MET8	P15807	274 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	KAR3	P17119	729 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	CDC15	P27636	974 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	LHS1	P36016	881 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	CUE2	P36075	443 aa	Known RBP	4.96	□□□□□ -1.62
YPK3	YBR028C	MRX1	P40050	688 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	ATF1	P40353	525 aa		4.96	□□□□□ -1.62
YPK3	YBR028C	LYS4	P49367	693 aa	Predicted RBP	4.96	□□□□□ -1.62
YPK3	YBR028C	CHO1	P08456	276 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	NUP1	P20676	1076 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	APN1	P22936	367 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	YCK1	P23291	538 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	SAC6	P32599	642 aa	Known RBP	4.95	□□□□□ -1.62
YPK3	YBR028C	SOF1	P33750	489 aa	Known RBP	4.95	□□□□□ -1.62
YPK3	YBR028C	RPN11	P43588	306 aa	Known RBP	4.95	□□□□□ -1.62
YPK3	YBR028C	YFR020W	P43600	232 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	NMD5	P46970	1048 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	NGL3	Q03210	505 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	SDH5	Q08230	162 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	CIR2	Q08822	631 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	YBR126W-A	Q8TGU7	68 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	YER145C-A	A0A023PYF4	145 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	ORC2	P32833	620 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	CTK2	P46962	323 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	ORC5	P50874	479 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	IRC3	Q06683	689 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	YOL159C	Q08300	171 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	PFA4	Q12006	378 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	GET3	Q12154	354 aa	Known RBP	4.95	□□□□□ -1.62
YPK3	YBR028C	YNL162W-A	Q3E7A8	72 aa		4.95	□□□□□ -1.62
YPK3	YBR028C	GPA1	P08539	472 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	ILS1	P09436	1072 aa	Known RBP	4.94	□□□□□ -1.62
YPK3	YBR028C	OLE1	P21147	510 aa	Known RBP	4.94	□□□□□ -1.62
YPK3	YBR028C	URE2	P23202	354 aa	Known RBP	4.94	□□□□□ -1.62
YPK3	YBR028C	MAL33	P38157	468 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	RTS1	P38903	757 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	NDE1	P40215	560 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	IRC7	P43623	340 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	RSC9	Q03124	581 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	COQ11	Q05892	277 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	THI7	Q05998	598 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	YLR455W	Q06188	304 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	ATG9	Q12142	997 aa		4.94	□□□□□ -1.62
YPK3	YBR028C	PGK1	P00560	416 aa	Known RBP	4.93	□□□□□ -1.62
YPK3	YBR028C	YMR085W	P0CF18	432 aa		4.93	□□□□□ -1.62
YPK3	YBR028C	PRE8	P23639	250 aa		4.93	□□□□□ -1.62
YPK3	YBR028C	SGF29	P25554	259 aa		4.93	□□□□□ -1.62
YPK3	YBR028C	PDB1	P32473	366 aa	Known RBP	4.93	□□□□□ -1.62
YPK3	YBR028C	TIM10	P87108	93 aa		4.93	□□□□□ -1.62
YPK3	YBR028C	LGE1	Q02796	332 aa	Known RBP	4.93	□□□□□ -1.62
YPK3	YBR028C	ORM2	Q06144	216 aa		4.93	□□□□□ -1.62
YPK3	YBR028C	GAL4	P04386	881 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	MRP2	P10663	115 aa	Predicted RBP	4.92	□□□□□ -1.62
YPK3	YBR028C	PWP1	P21304	576 aa	Known RBP	4.92	□□□□□ -1.62
YPK3	YBR028C	YCR006C	P25350	157 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	MSS51	P32335	436 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	OCT1	P35999	772 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	PXL1	P36166	706 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	MNN2	P38069	597 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	ARN1	P38731	627 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	YNG2	P38806	282 aa	Known RBP	4.92	□□□□□ -1.62
YPK3	YBR028C	ESL1	P40456	1118 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	YJL107C	P42947	387 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	ARE2	P53629	642 aa	Known RBP	4.92	□□□□□ -1.62
YPK3	YBR028C	EAF7	P53911	425 aa	Known RBP	4.92	□□□□□ -1.62
YPK3	YBR028C	PDR8	Q06149	701 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	YPL272C	Q08984	517 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	HUA2	Q12134	243 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	SPE4	Q12455	300 aa		4.92	□□□□□ -1.62
YPK3	YBR028C	HXK2	P04807	486 aa	Known RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	POL4	P25615	582 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	YBL029W	P38201	376 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	TPA1	P40032	644 aa	Known RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	RPS7B	P48164	190 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms