RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeast

Gene RPB8, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB8	YOR224C	ATG2	P53855	1592 aa		4.27	□□□□□ -1.73
RPB8	YOR224C	SIN3	P22579	1536 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	ATP2	P00830	511 aa	Known RBP	4.26	□□□□□ -1.73
RPB8	YOR224C	MGM1	P32266	881 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	YBR138C	P38277	524 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	ACA1	P39970	489 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	DJP1	P40564	432 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	ERR3	P42222	437 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	UBX4	P54730	416 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	SWT1	Q12104	458 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	YLR049C	Q12110	428 aa		4.26	□□□□□ -1.73
RPB8	YOR224C	GET3	Q12154	354 aa	Known RBP	4.26	□□□□□ -1.73
RPB8	YOR224C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RPB8	YOR224C	GAL4	P04386	881 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	APA1	P16550	321 aa	Known RBP	4.25	□□□□□ -1.73
RPB8	YOR224C	RAD16	P31244	790 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	ARN1	P38731	627 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	ASG1	P40467	964 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	YJL107C	P42947	387 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	YPT11	P48559	417 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	ADE16	P54113	591 aa	Known RBP	4.25	□□□□□ -1.73
RPB8	YOR224C	BLS1	Q06071	122 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	ATG23	Q06671	453 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	COX17	Q12287	69 aa		4.25	□□□□□ -1.73
RPB8	YOR224C	TPK1	P06244	397 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RPB8	YOR224C	MSM1	P22438	575 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	UBP7	P40453	1071 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	VPS25	P47142	202 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	YRB30	P53107	440 aa	Predicted RBP	4.24	□□□□□ -1.73
RPB8	YOR224C	MRPL13	Q02204	264 aa		4.24	□□□□□ -1.73
RPB8	YOR224C	SSK2	P53599	1579 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	MRP2	P10663	115 aa	Predicted RBP	4.23	□□□□□ -1.73
RPB8	YOR224C	PGI1	P12709	554 aa	Known RBP	4.23	□□□□□ -1.73
RPB8	YOR224C	CNA1	P23287	553 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	MSY1	P48527	492 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	UBP8	P50102	471 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	SWA2	Q06677	668 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	MCH4	Q08268	501 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	ATX2	Q12067	313 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	BAG7	Q12128	409 aa		4.23	□□□□□ -1.73
RPB8	YOR224C	BIK1	P11709	440 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	NCP1	P16603	691 aa	Known RBP	4.22	□□□□□ -1.73
RPB8	YOR224C	SPO16	P17122	198 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	LRE1	P25579	583 aa	Known RBP	4.22	□□□□□ -1.73
RPB8	YOR224C	PTH2	P34222	208 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	RPT2	P40327	437 aa	Known RBP	4.22	□□□□□ -1.73
RPB8	YOR224C	SMK1	P41808	388 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	MDV1	P47025	714 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	DCP2	P53550	970 aa	Known RBP	4.22	□□□□□ -1.73
RPB8	YOR224C	FCP1	Q03254	732 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	SNA4	Q07549	140 aa		4.22	□□□□□ -1.73
RPB8	YOR224C	YER190C-B	P0CX94	160 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	YEL077W-A	P0CX95	160 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	YGR296C-B	P0CX96	160 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	YPL283W-B	P0CX97	160 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	YPR204C-A	P0CX98	160 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	DBF20	P32328	564 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	OCT1	P35999	772 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	NPR3	P38742	1146 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	UME6	P39001	836 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	BUD16	P39988	312 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	COG1	P53079	417 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	YGL036W	P53185	909 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB8	YOR224C	BOP3	P53958	396 aa		4.21	□□□□□ -1.74
RPB8	YOR224C	RPL15B	P54780	204 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB8	YOR224C	LHS1	P36016	881 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	TOM71	P38825	639 aa	Known RBP	4.2	□□□□□ -1.74
RPB8	YOR224C	VRG4	P40107	337 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	TPM2	P40414	161 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	ASE1	P50275	885 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	VTC3	Q02725	835 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	PFA5	Q03289	374 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	TMA16	Q08687	178 aa		4.2	□□□□□ -1.74
RPB8	YOR224C	ERG27	Q12452	347 aa	Known RBP	4.2	□□□□□ -1.74
RPB8	YOR224C	YML003W	P0CF16	290 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	YCL049C	P25577	312 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	MRS6	P32864	603 aa	Known RBP	4.19	□□□□□ -1.74
RPB8	YOR224C	ADE17	P38009	592 aa	Known RBP	4.19	□□□□□ -1.74
RPB8	YOR224C	IRC8	P47046	822 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	YPL068C	Q02749	293 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	CRN1	Q06440	651 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	VAM6	Q07468	1049 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	UBX3	Q12229	455 aa		4.19	□□□□□ -1.74
RPB8	YOR224C	ESP1	Q03018	1630 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	YER145C-A	A0A023PYF4	145 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	AIM17	P23180	465 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	SOF1	P33750	489 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	UBP13	P38187	747 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	GND1	P38720	489 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	MRX1	P40050	688 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	LYS20	P48570	428 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	SCS3	P53012	380 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	ARC35	P53731	342 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	CSR1	Q06705	408 aa	Known RBP	4.18	□□□□□ -1.74
RPB8	YOR224C	FRE3	Q08905	711 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	BPT1	P14772	1559 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	SSM4	P40318	1319 aa		4.18	□□□□□ -1.74
RPB8	YOR224C	YPK9	Q12697	1472 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms