RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	REG1	Q00816	1014 aa		4.68	□□□□□ -1.66
DDI3	YNL335W	YPL071C	Q02864	156 aa		4.68	□□□□□ -1.66
DDI3	YNL335W	NKP1	Q12493	238 aa		4.68	□□□□□ -1.66
DDI3	YNL335W	YNL162W-A	Q3E7A8	72 aa		4.68	□□□□□ -1.66
DDI3	YNL335W	TY1B-DR4	Q07793	1604 aa		4.68	□□□□□ -1.66
DDI3	YNL335W	PTC6	P25646	442 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	TFC3	P34111	1160 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	FTH1	P38310	465 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	PFK26	P40433	827 aa	Known RBP	4.67	□□□□□ -1.66
DDI3	YNL335W	MSY1	P48527	492 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	DCP2	P53550	970 aa	Known RBP	4.67	□□□□□ -1.66
DDI3	YNL335W	COQ11	Q05892	277 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	RAD34	Q06665	692 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	YDL121C	Q07541	149 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	BUD21	Q08492	214 aa	Predicted RBP	4.67	□□□□□ -1.66
DDI3	YNL335W	LEA1	Q08963	238 aa	Predicted RBP	4.67	□□□□□ -1.66
DDI3	YNL335W	NBP2	Q12163	236 aa		4.67	□□□□□ -1.66
DDI3	YNL335W	MCM10	P32354	571 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	GEX2	P36173	615 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	BPL1	P48445	690 aa	Predicted RBP	4.66	□□□□□ -1.66
DDI3	YNL335W	CBK1	P53894	756 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	LGE1	Q02796	332 aa	Known RBP	4.66	□□□□□ -1.66
DDI3	YNL335W	SNO4	Q04902	237 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	TPO3	Q06451	622 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	SWA2	Q06677	668 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	HSP33	Q08914	237 aa	Known RBP	4.66	□□□□□ -1.66
DDI3	YNL335W	HSP32	Q08992	237 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	NUS1	Q12063	375 aa		4.66	□□□□□ -1.66
DDI3	YNL335W	LYS21	Q12122	440 aa	Known RBP	4.66	□□□□□ -1.66
DDI3	YNL335W	NUP1	P20676	1076 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	CBF2	P32504	956 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	PHM8	P40025	321 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	ASG1	P40467	964 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	VPS4	P52917	437 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	MEP3	P53390	489 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	ADE16	P54113	591 aa	Known RBP	4.65	□□□□□ -1.67
DDI3	YNL335W	SVL3	Q03088	825 aa	Known RBP	4.65	□□□□□ -1.67
DDI3	YNL335W	FCP1	Q03254	732 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	VCX1	Q99385	411 aa		4.65	□□□□□ -1.67
DDI3	YNL335W	CET1	O13297	549 aa	Predicted RBP	4.64	□□□□□ -1.67
DDI3	YNL335W	PGK1	P00560	416 aa	Known RBP	4.64	□□□□□ -1.67
DDI3	YNL335W	SUI3	P09064	285 aa	Known RBP	4.64	□□□□□ -1.67
DDI3	YNL335W	ILS1	P09436	1072 aa	Known RBP	4.64	□□□□□ -1.67
DDI3	YNL335W	APN1	P22936	367 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	ERG8	P24521	451 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	CDC15	P27636	974 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	GSH1	P32477	678 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	SRB5	P32585	307 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	UBP7	P40453	1071 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	SEG1	Q04279	960 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	RCO1	Q04779	684 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	CRN1	Q06440	651 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	YLR111W	Q12528	110 aa		4.64	□□□□□ -1.67
DDI3	YNL335W	FUM1	P08417	488 aa	Known RBP	4.63	□□□□□ -1.67
DDI3	YNL335W	MAK32	P23060	363 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	URE2	P23202	354 aa	Known RBP	4.63	□□□□□ -1.67
DDI3	YNL335W	MBR1	P23493	339 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	YSP3	P25036	478 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	CHS3	P29465	1165 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	MSS51	P32335	436 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	IMD2	P38697	523 aa	Known RBP	4.63	□□□□□ -1.67
DDI3	YNL335W	PSD1	P39006	500 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	IMD3	P50095	523 aa	Known RBP	4.63	□□□□□ -1.67
DDI3	YNL335W	SNU56	Q03782	492 aa	Known RBP	4.63	□□□□□ -1.67
DDI3	YNL335W	THI7	Q05998	598 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	THI3	Q07471	609 aa		4.63	□□□□□ -1.67
DDI3	YNL335W	RPB2	P08518	1224 aa	Known RBP	4.62	□□□□□ -1.67
DDI3	YNL335W	PCT1	P13259	424 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	MRP20	P32387	263 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	SWE1	P32944	819 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	DPH1	P40487	425 aa	Known RBP	4.62	□□□□□ -1.67
DDI3	YNL335W	CIN1	P40987	1014 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	ORC5	P50874	479 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	RIM13	Q03792	727 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	YOL087C	Q99247	1116 aa		4.62	□□□□□ -1.67
DDI3	YNL335W	GFD2	P25370	566 aa	Known RBP	4.61	□□□□□ -1.67
DDI3	YNL335W	LHS1	P36016	881 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	NTR2	P36118	322 aa	Predicted RBP	4.61	□□□□□ -1.67
DDI3	YNL335W	AAP1	P37898	856 aa	Known RBP	4.61	□□□□□ -1.67
DDI3	YNL335W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
DDI3	YNL335W	ERV46	P39727	415 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	MRX1	P40050	688 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	YJR061W	P40355	935 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	MNT3	P40549	630 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	SNO3	P43544	222 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	IRC7	P43623	340 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	NMD5	P46970	1048 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	BSC5	P53755	489 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	PSK2	Q08217	1101 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	SKM1	Q12469	655 aa		4.61	□□□□□ -1.67
DDI3	YNL335W	SOF1	P33750	489 aa	Known RBP	4.6	□□□□□ -1.67
DDI3	YNL335W	KTR3	P38130	404 aa	Predicted RBP	4.6	□□□□□ -1.67
DDI3	YNL335W	YPR003C	P53394	754 aa		4.6	□□□□□ -1.67
DDI3	YNL335W	FRE7	Q12333	620 aa		4.6	□□□□□ -1.67
DDI3	YNL335W	YOR019W	Q99248	730 aa		4.6	□□□□□ -1.67
DDI3	YNL335W	HSL1	P34244	1518 aa		4.6	□□□□□ -1.67
DDI3	YNL335W	MRP2	P10663	115 aa	Predicted RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	SRP54	P20424	541 aa	Known RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	PRE8	P23639	250 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	ALY1	P36117	915 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms