RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeast

Gene SMD2, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD2	YLR275W	YBR138C	P38277	524 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	YHL041W	P38730	149 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	PHM8	P40025	321 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	DJP1	P40564	432 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	ZAP1	P47043	880 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	LSC1	P53598	329 aa	Known RBP	4.16	□□□□□ -1.74
SMD2	YLR275W	ATG23	Q06671	453 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	MCH4	Q08268	501 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	UBX3	Q12229	455 aa		4.16	□□□□□ -1.74
SMD2	YLR275W	PUG1	P40100	303 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	STB2	P46679	850 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	BOP3	P53958	396 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	TRS130	Q03660	1102 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	NUP53	Q03790	475 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	SNA4	Q07549	140 aa		4.15	□□□□□ -1.75
SMD2	YLR275W	SUI3	P09064	285 aa	Known RBP	4.14	□□□□□ -1.75
SMD2	YLR275W	CLB4	P24871	460 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	LRE1	P25579	583 aa	Known RBP	4.14	□□□□□ -1.75
SMD2	YLR275W	RFA2	P26754	273 aa	Known RBP	4.14	□□□□□ -1.75
SMD2	YLR275W	ASG1	P40467	964 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	FAF1	P40546	346 aa	Predicted RBP	4.14	□□□□□ -1.75
SMD2	YLR275W	MEP2	P41948	499 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	ADE16	P54113	591 aa	Known RBP	4.14	□□□□□ -1.75
SMD2	YLR275W	STP3	Q05937	343 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	PIG1	Q06216	648 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	SRL1	Q08673	210 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	DSE3	Q08729	430 aa		4.14	□□□□□ -1.75
SMD2	YLR275W	YML003W	P0CF16	290 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	PCT1	P13259	424 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	PHO81	P17442	1178 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	VPS41	P38959	992 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	YIL152W	P40455	235 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	ERR3	P42222	437 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	UBP8	P50102	471 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
SMD2	YLR275W	EAF7	P53911	425 aa	Known RBP	4.13	□□□□□ -1.75
SMD2	YLR275W	BUD7	Q08754	746 aa		4.13	□□□□□ -1.75
SMD2	YLR275W	MRP2	P10663	115 aa	Predicted RBP	4.12	□□□□□ -1.75
SMD2	YLR275W	YCR006C	P25350	157 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	VPS25	P47142	202 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	VAM6	Q07468	1049 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	MLH2	Q07980	695 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	GSH2	Q08220	491 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	SWT1	Q12104	458 aa		4.12	□□□□□ -1.75
SMD2	YLR275W	GPA1	P08539	472 aa		4.11	□□□□□ -1.75
SMD2	YLR275W	YSP3	P25036	478 aa		4.11	□□□□□ -1.75
SMD2	YLR275W	YIL161W	P40449	235 aa	Known RBP	4.11	□□□□□ -1.75
SMD2	YLR275W	YGL036W	P53185	909 aa	Predicted RBP	4.11	□□□□□ -1.75
SMD2	YLR275W	DCP2	P53550	970 aa	Known RBP	4.11	□□□□□ -1.75
SMD2	YLR275W	SWF1	Q04629	336 aa		4.11	□□□□□ -1.75
SMD2	YLR275W	YOL057W	Q08225	711 aa		4.11	□□□□□ -1.75
SMD2	YLR275W	NUP120	P35729	1037 aa		4.1	□□□□□ -1.75
SMD2	YLR275W	EXO84	P38261	753 aa		4.1	□□□□□ -1.75
SMD2	YLR275W	YMR034C	Q05131	434 aa	Predicted RBP	4.1	□□□□□ -1.75
SMD2	YLR275W	SWA2	Q06677	668 aa		4.1	□□□□□ -1.75
SMD2	YLR275W	FRE3	Q08905	711 aa		4.1	□□□□□ -1.75
SMD2	YLR275W	ATP2	P00830	511 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	RPL42A	P0CX27	106 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	RPL42B	P0CX28	106 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	NCP1	P16603	691 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	SPO16	P17122	198 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	GEX2	P36173	615 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	MRPL36	P36531	177 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	ARC40	P38328	384 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	ACA1	P39970	489 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	RPT2	P40327	437 aa	Known RBP	4.09	□□□□□ -1.75
SMD2	YLR275W	CAC2	Q04199	468 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	YLR455W	Q06188	304 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	YLR049C	Q12110	428 aa		4.09	□□□□□ -1.75
SMD2	YLR275W	YER145C-A	A0A023PYF4	145 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	MSM1	P22438	575 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	YCR043C	P25361	127 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	YCL049C	P25577	312 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	ADE17	P38009	592 aa	Known RBP	4.08	□□□□□ -1.76
SMD2	YLR275W	NPR3	P38742	1146 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	PSF2	P40359	213 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	POS5	Q06892	414 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	YLR112W	Q12130	139 aa		4.08	□□□□□ -1.76
SMD2	YLR275W	YFL068W	P0CX99	160 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	YLL066W-A	P0CY00	160 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	YLL067W-A	P0CY01	160 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	UBP13	P38187	747 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	TES1	P41903	349 aa	Known RBP	4.07	□□□□□ -1.76
SMD2	YLR275W	UBX4	P54730	416 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	IZH1	Q03419	316 aa		4.07	□□□□□ -1.76
SMD2	YLR275W	APA1	P16550	321 aa	Known RBP	4.06	□□□□□ -1.76
SMD2	YLR275W	SRP54	P20424	541 aa	Known RBP	4.06	□□□□□ -1.76
SMD2	YLR275W	GCS1	P35197	352 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	MET30	P39014	640 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	PCL6	P40038	420 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	YIL169C	P40442	995 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	ARC35	P53731	342 aa	Known RBP	4.06	□□□□□ -1.76
SMD2	YLR275W	CSL4	P53859	292 aa	Predicted RBP	4.06	□□□□□ -1.76
SMD2	YLR275W	CIA1	Q05583	330 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	ECI1	Q05871	280 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	NEW1	Q08972	1196 aa	Known RBP	4.06	□□□□□ -1.76
SMD2	YLR275W	COX17	Q12287	69 aa		4.06	□□□□□ -1.76
SMD2	YLR275W	NUC1	P08466	329 aa		4.05	□□□□□ -1.76
SMD2	YLR275W	LHS1	P36016	881 aa		4.05	□□□□□ -1.76
SMD2	YLR275W	MNN2	P38069	597 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms