RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W ATP25Q03153 612 aa3.72□□□□□ -1.81
LCB5YLR260W NHX1Q04121 633 aa3.72□□□□□ -1.81
LCB5YLR260W EMI2Q04409 500 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W AIM32Q04689 311 aa3.72□□□□□ -1.81
LCB5YLR260W SNO4Q04902 237 aa3.72□□□□□ -1.81
LCB5YLR260W MCP2Q06567 569 aa3.72□□□□□ -1.81
LCB5YLR260W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
LCB5YLR260W MCH5Q08777 521 aa3.72□□□□□ -1.81
LCB5YLR260W HSP33Q08914 237 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W YIG1Q08956 461 aa3.72□□□□□ -1.81
LCB5YLR260W HSP32Q08992 237 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-GR1Q12085 440 aa3.72□□□□□ -1.81
LCB5YLR260W YRM1Q12340 786 aa3.72□□□□□ -1.81
LCB5YLR260W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
LCB5YLR260W PTC5Q12511 572 aa3.72□□□□□ -1.81
LCB5YLR260W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W TY1A-OLQ92392 440 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W APM4Q99186 491 aa3.72□□□□□ -1.81
LCB5YLR260W APE1P14904 514 aa3.72□□□□□ -1.81
LCB5YLR260W MCM3P24279 971 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W RME1P32338 300 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W GYP6P32806 458 aa3.72□□□□□ -1.81
LCB5YLR260W LOT5P34234 306 aa3.72□□□□□ -1.81
LCB5YLR260W GCS1P35197 352 aa3.72□□□□□ -1.81
LCB5YLR260W SAP190P36123 1033 aa3.72□□□□□ -1.81
LCB5YLR260W DRE2P36152 348 aa3.72□□□□□ -1.81
LCB5YLR260W CCL1P37366 393 aa3.72□□□□□ -1.81
LCB5YLR260W YRO2P38079 344 aa3.72□□□□□ -1.81
LCB5YLR260W SIF2P38262 535 aa3.72□□□□□ -1.81
LCB5YLR260W ERC1P38767 581 aa3.72□□□□□ -1.81
LCB5YLR260W SPT8P38915 602 aa3.72□□□□□ -1.81
LCB5YLR260W SHU2P38957 223 aa3.72□□□□□ -1.81
LCB5YLR260W STT3P39007 718 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W ARB1P40024 610 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W FIS1P40515 155 aa3.72□□□□□ -1.81
LCB5YLR260W STU2P46675 888 aa3.72□□□□□ -1.81
LCB5YLR260W UBC9P50623 157 aaPredicted RBP3.72□□□□□ -1.81
LCB5YLR260W TOF1P53840 1238 aa3.72□□□□□ -1.81
LCB5YLR260W MUK1Q02866 612 aa3.72□□□□□ -1.81
LCB5YLR260W HOS3Q02959 697 aaKnown RBP3.72□□□□□ -1.81
LCB5YLR260W RSF1Q05043 376 aa3.72□□□□□ -1.81
LCB5YLR260W SKS1Q12505 502 aa3.72□□□□□ -1.81
LCB5YLR260W GCN4P03069 281 aa3.71□□□□□ -1.82
LCB5YLR260W SWI6P09959 803 aa3.71□□□□□ -1.82
LCB5YLR260W CLN3P13365 580 aa3.71□□□□□ -1.82
LCB5YLR260W HOM2P13663 365 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W PRP22P24384 1145 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W SPB1P25582 841 aaPredicted RBP3.71□□□□□ -1.82
LCB5YLR260W URK1P27515 501 aa3.71□□□□□ -1.82
LCB5YLR260W NTG1P31378 399 aa3.71□□□□□ -1.82
LCB5YLR260W MSS51P32335 436 aa3.71□□□□□ -1.82
LCB5YLR260W PCH2P38126 564 aa3.71□□□□□ -1.82
LCB5YLR260W ALD5P40047 520 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W MKT1P40850 830 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W OPT1P40897 799 aa3.71□□□□□ -1.82
LCB5YLR260W CCM1P48237 864 aaPredicted RBP3.71□□□□□ -1.82
LCB5YLR260W PUS4P48567 403 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W ART5P53244 586 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W REX2P54964 269 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W MFM1Q02783 413 aa3.71□□□□□ -1.82
LCB5YLR260W CWC2Q12046 339 aaPredicted RBP3.71□□□□□ -1.82
LCB5YLR260W GET3Q12154 354 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W MDY2Q12285 212 aa3.71□□□□□ -1.82
LCB5YLR260W PCD1Q12524 340 aa3.71□□□□□ -1.82
LCB5YLR260W ADE8P04161 214 aa3.71□□□□□ -1.82
LCB5YLR260W TPK1P06244 397 aa3.71□□□□□ -1.82
LCB5YLR260W ADH4P10127 382 aa3.71□□□□□ -1.82
LCB5YLR260W THR4P16120 514 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W RPB4P20433 221 aaPredicted RBP3.71□□□□□ -1.82
LCB5YLR260W DBP3P20447 523 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W EFT1P32324 842 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W STE13P33894 931 aa3.71□□□□□ -1.82
LCB5YLR260W RMA1P36001 430 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W SET3P36124 751 aa3.71□□□□□ -1.82
LCB5YLR260W OPY1P38271 328 aa3.71□□□□□ -1.82
LCB5YLR260W SLX1P38324 304 aa3.71□□□□□ -1.82
LCB5YLR260W AVT1P47082 602 aa3.71□□□□□ -1.82
LCB5YLR260W RPN14P53196 417 aa3.71□□□□□ -1.82
LCB5YLR260W DAM1P53267 343 aa3.71□□□□□ -1.82
LCB5YLR260W ZPR1P53303 486 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W YGR266WP53326 701 aa3.71□□□□□ -1.82
LCB5YLR260W EOS1P53938 366 aa3.71□□□□□ -1.82
LCB5YLR260W ARK1P53974 638 aa3.71□□□□□ -1.82
LCB5YLR260W PRO2P54885 456 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W ERB1Q04660 807 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W COQ9Q05779 260 aa3.71□□□□□ -1.82
LCB5YLR260W ADY4Q05955 493 aa3.71□□□□□ -1.82
LCB5YLR260W CSR1Q06705 408 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W SLK19Q08581 821 aaKnown RBP3.71□□□□□ -1.82
LCB5YLR260W PSY3Q12318 242 aa3.71□□□□□ -1.82
LCB5YLR260W PET111P08468 800 aa3.7□□□□□ -1.82
LCB5YLR260W YEL076C-AP0CX16 216 aa3.7□□□□□ -1.82
LCB5YLR260W YLR464WP0CX17 216 aa3.7□□□□□ -1.82
LCB5YLR260W CLB4P24871 460 aa3.7□□□□□ -1.82
LCB5YLR260W FUB1P25659 250 aa3.7□□□□□ -1.82
LCB5YLR260W SEC65P29478 273 aa3.7□□□□□ -1.82
LCB5YLR260W REC104P33323 182 aa3.7□□□□□ -1.82
LCB5YLR260W PGM1P33401 570 aaKnown RBP3.7□□□□□ -1.82
LCB5YLR260W COY1P34237 679 aa3.7□□□□□ -1.82
LCB5YLR260W PIH1P38768 344 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms