RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKR040C	YKR040C	SAP4	P53036	818 aa		11.75	□□□□□ -0.53
YKR040C	YKR040C	MAL13	P53338	473 aa		11.75	□□□□□ -0.53
YKR040C	YKR040C	SPT15	P13393	240 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	EMC1	P25574	760 aa		11.74	□□□□□ -0.53
YKR040C	YKR040C	SRP101	P32916	621 aa		11.74	□□□□□ -0.53
YKR040C	YKR040C	IRS4	P36115	615 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	TIF34	P40217	347 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	DPH1	P40487	425 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	TES1	P41903	349 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	SET2	P46995	733 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	COG1	P53079	417 aa		11.74	□□□□□ -0.53
YKR040C	YKR040C	YNL143C	P53908	130 aa		11.74	□□□□□ -0.53
YKR040C	YKR040C	ATG10	Q07879	167 aa		11.74	□□□□□ -0.53
YKR040C	YKR040C	RIO1	Q12196	484 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	NOP14	Q99207	810 aa	Known RBP	11.74	□□□□□ -0.53
YKR040C	YKR040C	PET111	P08468	800 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	CBF1	P17106	351 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	SLX5	P32828	619 aa	Known RBP	11.73	□□□□□ -0.53
YKR040C	YKR040C	CTF13	P35203	478 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	YKL151C	P36059	337 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	OLA1	P38219	394 aa	Known RBP	11.73	□□□□□ -0.53
YKR040C	YKR040C	TAE1	P38340	232 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	WSC4	P38739	605 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	NOP15	P53927	220 aa	Predicted RBP	11.73	□□□□□ -0.53
YKR040C	YKR040C	EFM6	P53970	246 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	YDR131C	Q03899	556 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	YDL129W	Q07555	291 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	RMP1	Q12530	201 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	NAG1	Q8TGN9	163 aa		11.73	□□□□□ -0.53
YKR040C	YKR040C	MPH2	P0CD99	609 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	YCL068C	P25593	260 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	YBR259W	P38338	688 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	RPH1	P39956	796 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	MNN10	P50108	393 aa	Known RBP	11.72	□□□□□ -0.53
YKR040C	YKR040C	SNO2	P53823	222 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	COG6	P53959	839 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	YDR132C	Q03900	495 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	MCP2	Q06567	569 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	YLR149C	Q99296	730 aa		11.72	□□□□□ -0.53
YKR040C	YKR040C	COX3	P00420	269 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	CMD1	P06787	147 aa	Known RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	POL30	P15873	258 aa	Known RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	UBA1	P22515	1024 aa	Known RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	CDC20	P26309	610 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	IMP3	P32899	183 aa	Predicted RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	SLD2	P34252	453 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	SRP72	P38688	640 aa	Known RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	PFS1	P38872	237 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	YJL070C	P40361	888 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	RPL34B	P40525	121 aa	Known RBP	11.71	□□□□□ -0.53
YKR040C	YKR040C	INA22	P40576	216 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	YNL320W	P42840	284 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	SWC4	P53201	476 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	FRT1	Q99332	602 aa		11.71	□□□□□ -0.53
YKR040C	YKR040C	SEN1	Q00416	2231 aa	Known RBP	11.7	□□□□□ -0.54
YKR040C	YKR040C	SUC2	P00724	532 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	PEP5	P12868	1029 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	HSP60	P19882	572 aa	Known RBP	11.7	□□□□□ -0.54
YKR040C	YKR040C	URA7	P28274	579 aa	Known RBP	11.7	□□□□□ -0.54
YKR040C	YKR040C	PLC1	P32383	869 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	SMI1	P32566	505 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	PHO11	P35842	467 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	PHO12	P38693	467 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	STN1	P38960	494 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	PXA1	P41909	870 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	NBP35	P52920	328 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	MTO1	P53070	669 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	YPL113C	Q02961	396 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	TRS31	Q03337	283 aa		11.7	□□□□□ -0.54
YKR040C	YKR040C	YKR104W	P0CE69	306 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	APA1	P16550	321 aa	Known RBP	11.69	□□□□□ -0.54
YKR040C	YKR040C	TPS2	P31688	896 aa	Known RBP	11.69	□□□□□ -0.54
YKR040C	YKR040C	RRP3	P38712	501 aa	Known RBP	11.69	□□□□□ -0.54
YKR040C	YKR040C	YFL012W	P43580	148 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	RRB1	Q04225	511 aa	Known RBP	11.69	□□□□□ -0.54
YKR040C	YKR040C	ATG23	Q06671	453 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	ADY3	Q07732	790 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	BUD20	Q08004	166 aa	Predicted RBP	11.69	□□□□□ -0.54
YKR040C	YKR040C	TGL5	Q12043	749 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	YEL077C	Q3E7X8	1277 aa		11.69	□□□□□ -0.54
YKR040C	YKR040C	CDC8	P00572	216 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	GAL11	P19659	1081 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	URA10	P30402	227 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	SPS19	P32573	292 aa	Known RBP	11.68	□□□□□ -0.54
YKR040C	YKR040C	SEO1	P39709	593 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	DSN1	P40568	576 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	SAE2	P46946	345 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	RPN9	Q04062	393 aa	Known RBP	11.68	□□□□□ -0.54
YKR040C	YKR040C	CIA1	Q05583	330 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	YFT2	Q06676	274 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	CUE5	Q08412	411 aa	Known RBP	11.68	□□□□□ -0.54
YKR040C	YKR040C	SLD7	Q08457	257 aa		11.68	□□□□□ -0.54
YKR040C	YKR040C	LAS1	P36146	502 aa	Predicted RBP	11.67	□□□□□ -0.54
YKR040C	YKR040C	MAK5	P38112	773 aa	Predicted RBP	11.67	□□□□□ -0.54
YKR040C	YKR040C	MRP21	P38175	177 aa		11.67	□□□□□ -0.54
YKR040C	YKR040C	NHX1	Q04121	633 aa		11.67	□□□□□ -0.54
YKR040C	YKR040C	YMR027W	Q04371	470 aa		11.67	□□□□□ -0.54
YKR040C	YKR040C	HBT1	Q07653	1046 aa	Known RBP	11.67	□□□□□ -0.54
YKR040C	YKR040C	PIN2	Q12057	282 aa		11.67	□□□□□ -0.54
YKR040C	YKR040C	NUR1	Q12066	484 aa		11.67	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 294.8 ms