RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	MAD3	P47074	515 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	PHB2	P50085	310 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YAP1802	P53309	568 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	COS7	Q07788	383 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YPL216W	Q08964	1102 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YLR099W-A	Q3E798	87 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	SPS2	P08459	502 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	HOM6	P31116	359 aa	Known RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	GCD7	P32502	381 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	SUV3	P32580	737 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YBL055C	P34220	418 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YKR075C	P36155	307 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	MSG5	P38590	489 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	KSP1	P38691	1029 aa	Known RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	FSH1	P38777	243 aa	Known RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	EPS1	P40557	701 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	DIM1	P41819	318 aa	Known RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	YGR053C	P53234	283 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	RNH70	P53331	553 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	HCH1	P53834	153 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	GIM5	Q04493	163 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	IWR1	Q07532	353 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR261C-D	YDR261C-D	PEP4	P07267	405 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	KIN2	P13186	1147 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	DBP1	P24784	617 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PDB1	P32473	366 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SEC17	P32602	292 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	RTG2	P32608	588 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PTC3	P34221	468 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YDR261C-D	YDR261C-D	ECM27	P47144	725 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	TRM9	P49957	279 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PRP24	P49960	444 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PEX21	P50091	288 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ART5	P53244	586 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATF2	P53296	535 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPA49	Q01080	415 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	WAR1	Q03631	944 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SPR28	Q04921	423 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SSK1	Q07084	712 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	BAG7	Q12128	409 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATG9	Q12142	997 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	CBP6	P07253	162 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	YCR051W	P25631	222 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	TIP20	P33891	701 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ACO2	P39533	789 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	PAC1	P39946	494 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	NSE4	P43124	402 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	BNA6	P43619	295 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	LYS20	P48570	428 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	TRI1	Q05024	226 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	RSB1	Q08417	382 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YDR261C-D	YDR261C-D	CPS1	P27614	576 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	MLS1	P30952	554 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	CDC12	P32468	407 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	WHI3	P34761	661 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SPC34	P36131	295 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	UBP14	P38237	781 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	FTH1	P38310	465 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SHU2	P38957	223 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	LSM4	P40070	187 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	MIC19	P43594	170 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ALD4	P46367	519 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	FAA4	P47912	694 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	GTR2	P53290	341 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SNF12	P53628	566 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	BOR1	P53838	576 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	ELC1	Q03071	99 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	CSC1	Q06538	782 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SAM3	Q08986	587 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	AFI1	Q99222	893 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	MF(ALPHA)1	P01149	165 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SCH9	P11792	824 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SGV1	P23293	657 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	VAN1	P23642	535 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPL24B	P24000	155 aa	Known RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	MNE1	P24720	663 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SRB6	P32570	121 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	SKG6	P32900	734 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	EDS1	P38073	919 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	AMN1	P38285	549 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	RTS2	P40962	232 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	GUP1	P53154	560 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	HIM1	Q06674	414 aa		4.55	□□□□□ -1.68
YDR261C-D	YDR261C-D	CYB2	P00175	591 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YPT1	P01123	206 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	GLK1	P17709	500 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MRPL11	P36521	249 aa	Predicted RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MAM1	P40065	302 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	SKP2	P42843	763 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YJL055W	P47044	245 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MRX6	P48564	524 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	IMO32	P53219	342 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YMR210W	Q03649	449 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	UTP21	Q06078	939 aa	Predicted RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	NUR1	Q12066	484 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	LPD1	P09624	499 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	HOM3	P10869	527 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms