RNA–Protein interactions for RNA: RUF20

RUF20, Transcript of RNA of Unknown Function, yeast

Gene RUF20, Length 443 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF20	RUF20	RFA2	P26754	273 aa	Known RBP	4.63	□□□□□ -1.67
RUF20	RUF20	PHM8	P40025	321 aa		4.63	□□□□□ -1.67
RUF20	RUF20	KAP123	P40069	1113 aa	Known RBP	4.63	□□□□□ -1.67
RUF20	RUF20	UBP7	P40453	1071 aa		4.63	□□□□□ -1.67
RUF20	RUF20	YPL071C	Q02864	156 aa		4.63	□□□□□ -1.67
RUF20	RUF20	SEG1	Q04279	960 aa		4.63	□□□□□ -1.67
RUF20	RUF20	ORM2	Q06144	216 aa		4.63	□□□□□ -1.67
RUF20	RUF20	FRE7	Q12333	620 aa		4.63	□□□□□ -1.67
RUF20	RUF20	GUK1	P15454	187 aa	Known RBP	4.62	□□□□□ -1.67
RUF20	RUF20	NUP1	P20676	1076 aa		4.62	□□□□□ -1.67
RUF20	RUF20	APN1	P22936	367 aa		4.62	□□□□□ -1.67
RUF20	RUF20	PTC6	P25646	442 aa		4.62	□□□□□ -1.67
RUF20	RUF20	SSH4	P32343	579 aa		4.62	□□□□□ -1.67
RUF20	RUF20	CNS1	P33313	385 aa		4.62	□□□□□ -1.67
RUF20	RUF20	RRN3	P36070	627 aa		4.62	□□□□□ -1.67
RUF20	RUF20	AXL2	P38928	823 aa		4.62	□□□□□ -1.67
RUF20	RUF20	IST3	P40565	148 aa	Predicted RBP	4.62	□□□□□ -1.67
RUF20	RUF20	TPO3	Q06451	622 aa		4.62	□□□□□ -1.67
RUF20	RUF20	TMA16	Q08687	178 aa		4.62	□□□□□ -1.67
RUF20	RUF20	YOR389W	Q08912	624 aa		4.62	□□□□□ -1.67
RUF20	RUF20	LEA1	Q08963	238 aa	Predicted RBP	4.62	□□□□□ -1.67
RUF20	RUF20	YSP3	P25036	478 aa		4.61	□□□□□ -1.67
RUF20	RUF20	IMD2	P38697	523 aa	Known RBP	4.61	□□□□□ -1.67
RUF20	RUF20	IMD3	P50095	523 aa	Known RBP	4.61	□□□□□ -1.67
RUF20	RUF20	ADE16	P54113	591 aa	Known RBP	4.61	□□□□□ -1.67
RUF20	RUF20	RIM13	Q03792	727 aa		4.61	□□□□□ -1.67
RUF20	RUF20	PCT1	P13259	424 aa		4.6	□□□□□ -1.67
RUF20	RUF20	ERV46	P39727	415 aa		4.6	□□□□□ -1.67
RUF20	RUF20	YER010C	P40011	234 aa		4.6	□□□□□ -1.67
RUF20	RUF20	RIC1	P40395	1056 aa		4.6	□□□□□ -1.67
RUF20	RUF20	CIN1	P40987	1014 aa		4.6	□□□□□ -1.67
RUF20	RUF20	NMD5	P46970	1048 aa		4.6	□□□□□ -1.67
RUF20	RUF20	REG1	Q00816	1014 aa		4.6	□□□□□ -1.67
RUF20	RUF20	THI3	Q07471	609 aa		4.6	□□□□□ -1.67
RUF20	RUF20	NEW1	Q08972	1196 aa	Known RBP	4.6	□□□□□ -1.67
RUF20	RUF20	VCX1	Q99385	411 aa		4.6	□□□□□ -1.67
RUF20	RUF20	URE2	P23202	354 aa	Known RBP	4.59	□□□□□ -1.67
RUF20	RUF20	RER1	P25560	188 aa		4.59	□□□□□ -1.67
RUF20	RUF20	CBF2	P32504	956 aa		4.59	□□□□□ -1.67
RUF20	RUF20	SNO3	P43544	222 aa		4.59	□□□□□ -1.67
RUF20	RUF20	VPS4	P52917	437 aa		4.59	□□□□□ -1.67
RUF20	RUF20	DCP2	P53550	970 aa	Known RBP	4.59	□□□□□ -1.67
RUF20	RUF20	SVL3	Q03088	825 aa	Known RBP	4.59	□□□□□ -1.67
RUF20	RUF20	SNU56	Q03782	492 aa	Known RBP	4.59	□□□□□ -1.67
RUF20	RUF20	SWA2	Q06677	668 aa		4.59	□□□□□ -1.67
RUF20	RUF20	OPY2	Q06810	360 aa		4.59	□□□□□ -1.67
RUF20	RUF20	ERG27	Q12452	347 aa	Known RBP	4.59	□□□□□ -1.67
RUF20	RUF20	YLR302C	O13544	120 aa		4.58	□□□□□ -1.68
RUF20	RUF20	ILS1	P09436	1072 aa	Known RBP	4.58	□□□□□ -1.68
RUF20	RUF20	SRB5	P32585	307 aa		4.58	□□□□□ -1.68
RUF20	RUF20	TFC3	P34111	1160 aa		4.58	□□□□□ -1.68
RUF20	RUF20	PSD1	P39006	500 aa		4.58	□□□□□ -1.68
RUF20	RUF20	YPR003C	P53394	754 aa		4.58	□□□□□ -1.68
RUF20	RUF20	SNO4	Q04902	237 aa		4.58	□□□□□ -1.68
RUF20	RUF20	HSP33	Q08914	237 aa	Known RBP	4.58	□□□□□ -1.68
RUF20	RUF20	HSP32	Q08992	237 aa		4.58	□□□□□ -1.68
RUF20	RUF20	RPB2	P08518	1224 aa	Known RBP	4.57	□□□□□ -1.68
RUF20	RUF20	ERG8	P24521	451 aa		4.57	□□□□□ -1.68
RUF20	RUF20	LTP1	P40347	161 aa		4.57	□□□□□ -1.68
RUF20	RUF20	PFK26	P40433	827 aa	Known RBP	4.57	□□□□□ -1.68
RUF20	RUF20	ASG1	P40467	964 aa		4.57	□□□□□ -1.68
RUF20	RUF20	ULP2	P40537	1034 aa	Predicted RBP	4.57	□□□□□ -1.68
RUF20	RUF20	CDC1	P40986	491 aa		4.57	□□□□□ -1.68
RUF20	RUF20	IRC7	P43623	340 aa		4.57	□□□□□ -1.68
RUF20	RUF20	MEP3	P53390	489 aa		4.57	□□□□□ -1.68
RUF20	RUF20	IDP3	P53982	420 aa	Known RBP	4.57	□□□□□ -1.68
RUF20	RUF20	RSC9	Q03124	581 aa		4.57	□□□□□ -1.68
RUF20	RUF20	RCO1	Q04779	684 aa		4.57	□□□□□ -1.68
RUF20	RUF20	CRN1	Q06440	651 aa		4.57	□□□□□ -1.68
RUF20	RUF20	YOL087C	Q99247	1116 aa		4.57	□□□□□ -1.68
RUF20	RUF20	SRP54	P20424	541 aa	Known RBP	4.56	□□□□□ -1.68
RUF20	RUF20	MCM10	P32354	571 aa		4.56	□□□□□ -1.68
RUF20	RUF20	MRP20	P32387	263 aa		4.56	□□□□□ -1.68
RUF20	RUF20	VID27	P40157	782 aa		4.56	□□□□□ -1.68
RUF20	RUF20	SWP82	P43554	623 aa		4.56	□□□□□ -1.68
RUF20	RUF20	YNR061C	P53747	219 aa		4.56	□□□□□ -1.68
RUF20	RUF20	CBK1	P53894	756 aa		4.56	□□□□□ -1.68
RUF20	RUF20	YMR018W	Q04364	514 aa		4.56	□□□□□ -1.68
RUF20	RUF20	PSK2	Q08217	1101 aa		4.56	□□□□□ -1.68
RUF20	RUF20	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
RUF20	RUF20	SUI3	P09064	285 aa	Known RBP	4.55	□□□□□ -1.68
RUF20	RUF20	NTR2	P36118	322 aa	Predicted RBP	4.55	□□□□□ -1.68
RUF20	RUF20	AAP1	P37898	856 aa	Known RBP	4.55	□□□□□ -1.68
RUF20	RUF20	XBP1	P40489	647 aa		4.55	□□□□□ -1.68
RUF20	RUF20	BNA3	P47039	444 aa	Known RBP	4.55	□□□□□ -1.68
RUF20	RUF20	ORC5	P50874	479 aa		4.55	□□□□□ -1.68
RUF20	RUF20	ERG13	P54839	491 aa	Known RBP	4.55	□□□□□ -1.68
RUF20	RUF20	FCP1	Q03254	732 aa		4.55	□□□□□ -1.68
RUF20	RUF20	NUS1	Q12063	375 aa		4.55	□□□□□ -1.68
RUF20	RUF20	NKP1	Q12493	238 aa		4.55	□□□□□ -1.68
RUF20	RUF20	YMR085W	P0CF18	432 aa		4.54	□□□□□ -1.68
RUF20	RUF20	COQ3	P27680	312 aa		4.54	□□□□□ -1.68
RUF20	RUF20	MSS51	P32335	436 aa		4.54	□□□□□ -1.68
RUF20	RUF20	ADE17	P38009	592 aa	Known RBP	4.54	□□□□□ -1.68
RUF20	RUF20	FMP10	P40098	244 aa		4.54	□□□□□ -1.68
RUF20	RUF20	DPH1	P40487	425 aa	Known RBP	4.54	□□□□□ -1.68
RUF20	RUF20	PSA1	P41940	361 aa	Known RBP	4.54	□□□□□ -1.68
RUF20	RUF20	YDL121C	Q07541	149 aa		4.54	□□□□□ -1.68
RUF20	RUF20	NBP2	Q12163	236 aa		4.54	□□□□□ -1.68
RUF20	RUF20	YOR019W	Q99248	730 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms