RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 Sprr2a1Q9CQK8 83 aa3.81□□□□□ -1.8
Clrn1-201ENSMUST00000051408 Gm10160F6Y577 67 aa3.8□□□□□ -1.8
Clrn1-201ENSMUST00000051408 Ndufc1Q9CQY9 76 aa3.8□□□□□ -1.8
Clrn1-201ENSMUST00000051408 SptssbQ925E8 76 aa3.74□□□□□ -1.81
Clrn1-201ENSMUST00000051408 Krtap19-9bQ99NG9 58 aa3.69□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Syne1Q6ZWR6 8799 aa3.68□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Atox1O08997 68 aaKnown RBP3.68□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Hmcn1D3YXG0 5634 aa3.67□□□□□ -1.82
Clrn1-201ENSMUST00000051408 NebE9Q1W3 7152 aa3.65□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Gm10229O08631 77 aa3.64□□□□□ -1.83
Clrn1-201ENSMUST00000051408 DstQ91ZU6 7393 aaKnown RBP3.63□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Gm17402F6Z0L5 76 aa3.59□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Lce3bQ9CQM7 98 aa3.58□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Coa6Q8BGD8 79 aa3.53□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Gtf2h5Q8K2X8 71 aa3.53□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Camk2n1Q6QWF9 78 aa3.45□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap19-4Q925H7 84 aa3.44□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap4-16Q91W93 202 aa3.43□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Gm40460A0A1B0GR10 244 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap5-5Q2TA51 241 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Gm9955Q8CEJ8 102 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 H2al1mQ9DAD9 105 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 4930518I15RikQ3V2W7 57 aa3.41□□□□□ -1.86
Clrn1-201ENSMUST00000051408 AhnakE9Q616 5656 aaKnown RBP3.4□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Coa5Q99M07 74 aa3.4□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Sec61gP60060 68 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 B230307C23RikQ8BLB2 64 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Serp1Q9Z1W5 66 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Gm20661K7N787 53 aa3.33□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Smim20D3Z7Q2 69 aa3.32□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Pxt1Q8K459 51 aa3.31□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Krtap6-5Q925H3 78 aa3.31□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Sprr2fO70557 76 aa3.3□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Gm11938Q9D3H4 131 aa3.3□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Mt1P02802 61 aaKnown RBP3.29□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Lce3eF8VQJ0 98 aa3.26□□□□□ -1.89
Clrn1-201ENSMUST00000051408 Serp2Q6TAW2 65 aa3.24□□□□□ -1.89
Clrn1-201ENSMUST00000051408 H2al1aQ5M8Q2 105 aa3.17□□□□□ -1.9
Clrn1-201ENSMUST00000051408 H2al1eQ810S6 105 aa3.17□□□□□ -1.9
Clrn1-201ENSMUST00000051408 Atp5eP56382 52 aa3.11□□□□□ -1.91
Clrn1-201ENSMUST00000051408 Uqcr11Q9CPX8 56 aa3.1□□□□□ -1.91
Clrn1-201ENSMUST00000051408 Fam240bJ3QMB3 78 aa3.06□□□□□ -1.92
Clrn1-201ENSMUST00000051408 Pcp4l1Q6W8Q3 68 aa3.06□□□□□ -1.92
Clrn1-201ENSMUST00000051408 4933428G20RikQ9D3X4 101 aa3.05□□□□□ -1.92
Clrn1-201ENSMUST00000051408 H2al1bA0A087WP11 105 aa3.02□□□□□ -1.93
Clrn1-201ENSMUST00000051408 Ndufb1P0DN34 57 aa3.02□□□□□ -1.93
Clrn1-201ENSMUST00000051408 SnurfQ9WU12 71 aa2.98□□□□□ -1.93
Clrn1-201ENSMUST00000051408 4933415A04RikQ9D443 101 aa2.96□□□□□ -1.94
Clrn1-201ENSMUST00000051408 ObscnA2AAJ9 8891 aaKnown RBP2.94□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Cdc42se1Q8BHL7 80 aa2.93□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Smlr1J3QMJ4 66 aa2.92□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Phxr4P15974 95 aa2.92□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Gm3880A0A1B0GSB3 72 aa2.9□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Pet100P0DJE0 76 aa2.88□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Anapc13Q8R034 74 aa2.87□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Krtap6-2O08884 159 aa2.78□□□□□ -1.96
Clrn1-201ENSMUST00000051408 Sprr2eO70556 76 aa2.73□□□□□ -1.97
Clrn1-201ENSMUST00000051408 Tnp1P10856 55 aa2.7□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Gm12216A0A1W2P827 62 aa2.68□□□□□ -1.98
Clrn1-201ENSMUST00000051408 H2al1kJ3QP08 105 aa2.66□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Rps28P62858 69 aaKnown RBP2.66□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Sprr2hO70559 108 aa2.64□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Muc16A0A140LJ72 8478 aa2.63□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Tmem258P61166 79 aa2.63□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Brk1Q91VR8 75 aa2.61□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Gm10024A0A0A0MQA4 119 aa2.57□□□□□ -2
Clrn1-201ENSMUST00000051408 Romo1P60603 79 aa2.56□□□□□ -2
Clrn1-201ENSMUST00000051408 Gm19935A0A1B0GSF9 52 aa2.55□□□□□ -2
Clrn1-201ENSMUST00000051408 1110025L11RikO09048 78 aa2.51□□□□□ -2.01
Clrn1-201ENSMUST00000051408 Krtap21-1Q925H4 128 aa2.5□□□□□ -2.01
Clrn1-201ENSMUST00000051408 Ndufs5Q99LY9 106 aa2.45□□□□□ -2.02
Clrn1-201ENSMUST00000051408 Sprr2dO70555 85 aa2.42□□□□□ -2.02
Clrn1-201ENSMUST00000051408 Gm10337F7DEP7 55 aa2.39□□□□□ -2.03
Clrn1-201ENSMUST00000051408 Gm40193A0A1B0GT39 78 aa2.35□□□□□ -2.03
Clrn1-201ENSMUST00000051408 Ndufaf8A2AMZ4 74 aa2.26□□□□□ -2.05
Clrn1-201ENSMUST00000051408 Gm20538F6Z9R1 75 aa2.13□□□□□ -2.07
Clrn1-201ENSMUST00000051408 Sprr2bO70554 98 aa2.06□□□□□ -2.08
Clrn1-201ENSMUST00000051408 Gm9112A2AI92 75 aa1.8□□□□□ -2.12
Clrn1-201ENSMUST00000051408 Mp68P56379 58 aa1.78□□□□□ -2.12
Clrn1-201ENSMUST00000051408 Phgr1Q8K0G7 91 aa1.5□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 79.5 ms