RNA–Protein interactions for RNA: ENSMUST00000214095.1

Ubp1-204, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-204ENSMUST00000214095 2210017I01RikA0A0A6YVV1 95 aa11.25□□□□□ -0.61
Ubp1-204ENSMUST00000214095 Romo1P60603 79 aa11.24□□□□□ -0.61
Ubp1-204ENSMUST00000214095 Dnhd1D3Z2X2 4750 aa11.11□□□□□ -0.63
Ubp1-204ENSMUST00000214095 Kiaa1109A2AAE1 5005 aa11.03□□□□□ -0.64
Ubp1-204ENSMUST00000214095 Herc2Q4U2R1 4836 aa10.99□□□□□ -0.65
Ubp1-204ENSMUST00000214095 Krtap13-1Q8K198 168 aa10.95□□□□□ -0.66
Ubp1-204ENSMUST00000214095 HydinQ80W93 5154 aa10.92□□□□□ -0.66
Ubp1-204ENSMUST00000214095 BC029722A0A0N4SW31 51 aa10.92□□□□□ -0.66
Ubp1-204ENSMUST00000214095 B930094E09RikQ8C4T2 136 aa10.9□□□□□ -0.66
Ubp1-204ENSMUST00000214095 2310057N15RikQ9D6T8 200 aa10.9□□□□□ -0.66
Ubp1-204ENSMUST00000214095 Gm21887J3QQ04 176 aa10.9□□□□□ -0.67
Ubp1-204ENSMUST00000214095 Birc6O88738 4882 aa10.88□□□□□ -0.67
Ubp1-204ENSMUST00000214095 Gm19426M0QWC7 77 aa10.87□□□□□ -0.67
Ubp1-204ENSMUST00000214095 Lrp2A2ARV4 4660 aa10.78□□□□□ -0.68
Ubp1-204ENSMUST00000214095 Sec61bQ9CQS8 96 aaKnown RBP10.75□□□□□ -0.69
Ubp1-204ENSMUST00000214095 Mp68P56379 58 aa10.7□□□□□ -0.7
Ubp1-204ENSMUST00000214095 Krtap1-5A2A590 122 aa10.69□□□□□ -0.7
Ubp1-204ENSMUST00000214095 Gm17402F6Z0L5 76 aa10.65□□□□□ -0.7
Ubp1-204ENSMUST00000214095 Gm20538F6Z9R1 75 aa10.61□□□□□ -0.71
Ubp1-204ENSMUST00000214095 Gm19402J3QJV4 266 aa10.5□□□□□ -0.73
Ubp1-204ENSMUST00000214095 Fam229aB2KGE5 128 aa10.43□□□□□ -0.74
Ubp1-204ENSMUST00000214095 PcloQ9QYX7 5068 aa10.42□□□□□ -0.74
Ubp1-204ENSMUST00000214095 Krtap16-3Q8C1I6 86 aa10.41□□□□□ -0.74
Ubp1-204ENSMUST00000214095 Gm10318A0A1W2P728 225 aa10.37□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Sprr2a3Q4KL71 83 aa10.37□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Sprr2a1Q9CQK8 83 aa10.37□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Krtap7-1Q9D3I6 87 aa10.36□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Spink7Q6IE32 76 aa10.34□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Crct1Q6PAI5 102 aa10.34□□□□□ -0.75
Ubp1-204ENSMUST00000214095 Krtap19-1Q925H2 87 aa10.25□□□□□ -0.77
Ubp1-204ENSMUST00000214095 Krtap19-3Q925H6 87 aa10.17□□□□□ -0.78
Ubp1-204ENSMUST00000214095 Gm40193A0A1B0GT39 78 aa10.15□□□□□ -0.78
Ubp1-204ENSMUST00000214095 Lce1mQ9CR91 182 aa10.01□□□□□ -0.81
Ubp1-204ENSMUST00000214095 Krtap1-4Q3V2D6 188 aa10.01□□□□□ -0.81
Ubp1-204ENSMUST00000214095 Herc1E9PZP8 4859 aa10□□□□□ -0.81
Ubp1-204ENSMUST00000214095 Ndufaf8A2AMZ4 74 aa9.98□□□□□ -0.81
Ubp1-204ENSMUST00000214095 Camk2n1Q6QWF9 78 aa9.93□□□□□ -0.82
Ubp1-204ENSMUST00000214095 Gm19668J3QMD1 248 aa9.91□□□□□ -0.82
Ubp1-204ENSMUST00000214095 ZanO88799 5376 aa9.84□□□□□ -0.83
Ubp1-204ENSMUST00000214095 4932415D10RikA0A1W2P6U8 4986 aa9.82□□□□□ -0.84
Ubp1-204ENSMUST00000214095 Hmcn2A2AJ76 5100 aa9.69□□□□□ -0.86
Ubp1-204ENSMUST00000214095 Ush2AQ2QI47 5193 aa9.67□□□□□ -0.86
Ubp1-204ENSMUST00000214095 Ubr4A2AN08 5180 aa9.67□□□□□ -0.86
Ubp1-204ENSMUST00000214095 Krtap1-3A2A588 173 aa9.66□□□□□ -0.86
Ubp1-204ENSMUST00000214095 Lce1jD3YUU5 139 aa9.63□□□□□ -0.87
Ubp1-204ENSMUST00000214095 Fat4Q2PZL6 4981 aa9.58□□□□□ -0.88
Ubp1-204ENSMUST00000214095 Krtap12-1Q9Z287 130 aa9.53□□□□□ -0.88
Ubp1-204ENSMUST00000214095 Gm18596A0A1W2P860 280 aa9.52□□□□□ -0.89
Ubp1-204ENSMUST00000214095 Krtap19-9aF8WH65 55 aa9.51□□□□□ -0.89
Ubp1-204ENSMUST00000214095 LorP18165 486 aa9.47□□□□□ -0.89
Ubp1-204ENSMUST00000214095 Gm9789Q8BIG3 52 aa9.43□□□□□ -0.9
Ubp1-204ENSMUST00000214095 Prm1P02319 51 aa9.38□□□□□ -0.91
Ubp1-204ENSMUST00000214095 Tnp1P10856 55 aa9.33□□□□□ -0.92
Ubp1-204ENSMUST00000214095 Rnf213E9Q555 5152 aaKnown RBP9.32□□□□□ -0.92
Ubp1-204ENSMUST00000214095 Prm2P07978 107 aa9.32□□□□□ -0.92
Ubp1-204ENSMUST00000214095 Gm7735D3YX18 52 aa9.31□□□□□ -0.92
Ubp1-204ENSMUST00000214095 Krtap17-1A2A5X6 109 aa9.16□□□□□ -0.94
Ubp1-204ENSMUST00000214095 Krtap8-1O08633 61 aa9.12□□□□□ -0.95
Ubp1-204ENSMUST00000214095 Lce1iQ9D6P5 149 aa9.03□□□□□ -0.96
Ubp1-204ENSMUST00000214095 Krtap19-2Q925I0 141 aa8.98□□□□□ -0.97
Ubp1-204ENSMUST00000214095 Krtap19-9bQ99NG9 58 aa8.97□□□□□ -0.97
Ubp1-204ENSMUST00000214095 Lce1a2Q9D1K4 149 aa8.97□□□□□ -0.97
Ubp1-204ENSMUST00000214095 SspoQ8CG65 4998 aa8.96□□□□□ -0.98
Ubp1-204ENSMUST00000214095 Gm9112A2AI92 75 aa8.96□□□□□ -0.98
Ubp1-204ENSMUST00000214095 Krtap9-5A2A5X3 358 aa8.92□□□□□ -0.98
Ubp1-204ENSMUST00000214095 2310046K23RikA0A0A6YVW6 87 aa8.85□□□□□ -0.99
Ubp1-204ENSMUST00000214095 Krtap9-3Q3V2C1 136 aa8.69□□□□□ -1.02
Ubp1-204ENSMUST00000214095 Lce1hQ9D6R3 140 aa8.59□□□□□ -1.03
Ubp1-204ENSMUST00000214095 Gm10061D3Z714 54 aa8.44□□□□□ -1.06
Ubp1-204ENSMUST00000214095 Muc5bE9Q5I3 4800 aa8.42□□□□□ -1.06
Ubp1-204ENSMUST00000214095 Mt2P02798 61 aa8.42□□□□□ -1.06
Ubp1-204ENSMUST00000214095 Gm6358A0A087WPH4 74 aa8.4□□□□□ -1.06
Ubp1-204ENSMUST00000214095 Lce1dQ9D731 133 aa8.06□□□□□ -1.12
Ubp1-204ENSMUST00000214095 Gm11569B1AQB1 180 aa7.97□□□□□ -1.13
Ubp1-204ENSMUST00000214095 Sprr2gO70558 76 aa7.92□□□□□ -1.14
Ubp1-204ENSMUST00000214095 Krtap22-2J3QNX6 67 aa7.89□□□□□ -1.15
Ubp1-204ENSMUST00000214095 Gm10272F7CZ33 110 aa7.81□□□□□ -1.16
Ubp1-204ENSMUST00000214095 Lce1eQ9D139 143 aa7.8□□□□□ -1.16
Ubp1-204ENSMUST00000214095 4933428G20RikQ9D3X4 101 aa7.78□□□□□ -1.16
Ubp1-204ENSMUST00000214095 Sprr2dO70555 85 aa7.77□□□□□ -1.17
Ubp1-204ENSMUST00000214095 Gm11938Q9D3H4 131 aa7.74□□□□□ -1.17
Ubp1-204ENSMUST00000214095 Mdn1A2ANY6 5589 aaKnown RBP7.61□□□□□ -1.19
Ubp1-204ENSMUST00000214095 Gm11562A0PK51 136 aa7.53□□□□□ -1.2
Ubp1-204ENSMUST00000214095 Lce1cQ9D1C5 147 aa7.44□□□□□ -1.22
Ubp1-204ENSMUST00000214095 Gm11555B1AQ89 175 aa7.32□□□□□ -1.24
Ubp1-204ENSMUST00000214095 Krtap19-4Q925H7 84 aa7.28□□□□□ -1.24
Ubp1-204ENSMUST00000214095 Krtap4-6Q3V4B7 195 aa7.26□□□□□ -1.25
Ubp1-204ENSMUST00000214095 Lce1gQ9D195 139 aa7.26□□□□□ -1.25
Ubp1-204ENSMUST00000214095 Lce3bQ9CQM7 98 aa7.22□□□□□ -1.25
Ubp1-204ENSMUST00000214095 Krtap4-2B1AQ85 167 aa7.21□□□□□ -1.26
Ubp1-204ENSMUST00000214095 Gm10100J3QK64 120 aa7.21□□□□□ -1.26
Ubp1-204ENSMUST00000214095 Syne1Q6ZWR6 8799 aa7.16□□□□□ -1.26
Ubp1-204ENSMUST00000214095 Lce1fB9EJP6 147 aa7.16□□□□□ -1.26
Ubp1-204ENSMUST00000214095 Lce1a1Q9CQH5 143 aa7.16□□□□□ -1.26
Ubp1-204ENSMUST00000214095 Krtap4-1Q3UUY3 169 aa7.12□□□□□ -1.27
Ubp1-204ENSMUST00000214095 Gm11596B1AQB0 205 aa7.06□□□□□ -1.28
Ubp1-204ENSMUST00000214095 Gm10142J3KMP7 120 aa7.06□□□□□ -1.28
Ubp1-204ENSMUST00000214095 Syne2Q6ZWQ0 6874 aaKnown RBP6.96□□□□□ -1.3
Ubp1-204ENSMUST00000214095 Gm11564A2A4L9 201 aa6.9□□□□□ -1.3
Ubp1-204ENSMUST00000214095 Gm11563B1AQ90 168 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms