RNA–Protein interactions for RNA: ENSMUST00000205659.1

Gtf3c1-204, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Gtf3c1, Length 6,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-204ENSMUST00000205659 Dnah6E9Q0B6 4144 aa4.9□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Hspg2Q05793 3707 aaKnown RBP4.89□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Pkd1O08852 4293 aa4.88□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Sprr2a3Q4KL71 83 aa4.88□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Sprr2a1Q9CQK8 83 aa4.88□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 PrkdcP97313 4128 aa4.87□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Kmt2aP55200 3966 aa4.87□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Dnah7bL7N1Y0 4068 aa4.86□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Gm18596A0A1W2P860 280 aa4.86□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Krtap19-9aF8WH65 55 aa4.84□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Sprr2kO70562 68 aa4.84□□□□□ -1.63
Gtf3c1-204ENSMUST00000205659 Krtap1-4Q3V2D6 188 aa4.83□□□□□ -1.64
Gtf3c1-204ENSMUST00000205659 SacsQ9JLC8 4582 aa4.81□□□□□ -1.64
Gtf3c1-204ENSMUST00000205659 LorP18165 486 aa4.77□□□□□ -1.65
Gtf3c1-204ENSMUST00000205659 Csmd3Q80T79 3707 aa4.75□□□□□ -1.65
Gtf3c1-204ENSMUST00000205659 Lrp1bQ9JI18 4599 aa4.7□□□□□ -1.66
Gtf3c1-204ENSMUST00000205659 Gm19402J3QJV4 266 aa4.69□□□□□ -1.66
Gtf3c1-204ENSMUST00000205659 Hectd4E9Q2E4 4418 aa4.67□□□□□ -1.66
Gtf3c1-204ENSMUST00000205659 Krtap12-1Q9Z287 130 aa4.67□□□□□ -1.66
Gtf3c1-204ENSMUST00000205659 Lce1mQ9CR91 182 aa4.65□□□□□ -1.67
Gtf3c1-204ENSMUST00000205659 Krtap8-1O08633 61 aa4.64□□□□□ -1.67
Gtf3c1-204ENSMUST00000205659 Krtap19-9bQ99NG9 58 aa4.62□□□□□ -1.67
Gtf3c1-204ENSMUST00000205659 Fras1Q80T14 4010 aa4.61□□□□□ -1.67
Gtf3c1-204ENSMUST00000205659 Ryr1E9PZQ0 5035 aa4.6□□□□□ -1.67
Gtf3c1-204ENSMUST00000205659 Fat1A0A1L1SQU7 4645 aa4.58□□□□□ -1.68
Gtf3c1-204ENSMUST00000205659 Fat3Q8BNA6 4555 aa4.56□□□□□ -1.68
Gtf3c1-204ENSMUST00000205659 Sprr2gO70558 76 aa4.53□□□□□ -1.68
Gtf3c1-204ENSMUST00000205659 Dnah7cA0A087WR13 4024 aa4.53□□□□□ -1.68
Gtf3c1-204ENSMUST00000205659 Krtap16-3Q8C1I6 86 aa4.52□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Dnah8Q91XQ0 4731 aa4.5□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Dnah7aE9Q0T8 4024 aa4.5□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Mycbp2Q7TPH6 4711 aa4.5□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Krtap19-3Q925H6 87 aa4.5□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Fat2Q5F226 4351 aa4.48□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Ryr2E9Q401 4966 aaKnown RBP4.47□□□□□ -1.69
Gtf3c1-204ENSMUST00000205659 Ryr3A2AGL3 4863 aa4.44□□□□□ -1.7
Gtf3c1-204ENSMUST00000205659 Krtap19-1Q925H2 87 aa4.42□□□□□ -1.7
Gtf3c1-204ENSMUST00000205659 Prm1P02319 51 aa4.42□□□□□ -1.7
Gtf3c1-204ENSMUST00000205659 Krtap9-5A2A5X3 358 aa4.37□□□□□ -1.71
Gtf3c1-204ENSMUST00000205659 Lrp1Q91ZX7 4545 aaKnown RBP4.33□□□□□ -1.72
Gtf3c1-204ENSMUST00000205659 Pkhd1l1Q80ZA4 4249 aa4.32□□□□□ -1.72
Gtf3c1-204ENSMUST00000205659 Vps13bQ80TY5 3993 aa4.3□□□□□ -1.72
Gtf3c1-204ENSMUST00000205659 Herc2Q4U2R1 4836 aa4.28□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 Gm7735D3YX18 52 aa4.25□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 Herc1E9PZP8 4859 aa4.24□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 2310046K23RikA0A0A6YVW6 87 aa4.23□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 Krtap1-3A2A588 173 aa4.23□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 Dnhd1D3Z2X2 4750 aa4.23□□□□□ -1.73
Gtf3c1-204ENSMUST00000205659 Gm9789Q8BIG3 52 aa4.21□□□□□ -1.74
Gtf3c1-204ENSMUST00000205659 Lce3bQ9CQM7 98 aa4.2□□□□□ -1.74
Gtf3c1-204ENSMUST00000205659 Kiaa1109A2AAE1 5005 aa4.19□□□□□ -1.74
Gtf3c1-204ENSMUST00000205659 Gm38119A0A0A6YX29 146 aa4.16□□□□□ -1.74
Gtf3c1-204ENSMUST00000205659 Lrp2A2ARV4 4660 aa4.14□□□□□ -1.75
Gtf3c1-204ENSMUST00000205659 Krtap19-2Q925I0 141 aa4.14□□□□□ -1.75
Gtf3c1-204ENSMUST00000205659 Mt2P02798 61 aa4.12□□□□□ -1.75
Gtf3c1-204ENSMUST00000205659 Pkhd1E9PZ36 4059 aa4.12□□□□□ -1.75
Gtf3c1-204ENSMUST00000205659 Birc6O88738 4882 aa4.11□□□□□ -1.75
Gtf3c1-204ENSMUST00000205659 Lce1jD3YUU5 139 aa4.09□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 Lce3cQ91V05 98 aa4.09□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 Gm10272F7CZ33 110 aa4.08□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 Krtap22-2J3QNX6 67 aa4.08□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 HydinQ80W93 5154 aa4.05□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 Sprr2iO70560 76 aa4.05□□□□□ -1.76
Gtf3c1-204ENSMUST00000205659 Lce1gQ9D195 139 aa4.01□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Lce1iQ9D6P5 149 aa4.01□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Lce1hQ9D6R3 140 aa4.01□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Gm10100J3QK64 120 aa4.01□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Gm10061D3Z714 54 aa4□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Kmt2cQ8BRH4 4903 aa3.98□□□□□ -1.77
Gtf3c1-204ENSMUST00000205659 Lce3eF8VQJ0 98 aa3.94□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 Lce3fQ6PAI4 98 aa3.94□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 Sprr2fO70557 76 aa3.94□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 Gm10142J3KMP7 120 aa3.93□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 Lce3dE9Q8V1 98 aa3.92□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 Gm11569B1AQB1 180 aa3.9□□□□□ -1.78
Gtf3c1-204ENSMUST00000205659 PcloQ9QYX7 5068 aa3.88□□□□□ -1.79
Gtf3c1-204ENSMUST00000205659 Abca13Q5SSE9 5034 aa3.86□□□□□ -1.79
Gtf3c1-204ENSMUST00000205659 Lce3aQ497I5 98 aa3.82□□□□□ -1.8
Gtf3c1-204ENSMUST00000205659 Lce1bQ9D149 137 aa3.76□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Krtap9-3Q3V2C1 136 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Lce1fB9EJP6 147 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Lce1cQ9D1C5 147 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Lce1lQ9D1G7 135 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Lce1a2Q9D1K4 149 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Lce1dQ9D731 133 aa3.74□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 Sprr2eO70556 76 aa3.73□□□□□ -1.81
Gtf3c1-204ENSMUST00000205659 4932415D10RikA0A1W2P6U8 4986 aa3.7□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 Gm10024A0A0A0MQA4 119 aa3.68□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 Mt4P47945 62 aa3.67□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 ZanO88799 5376 aa3.67□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 Krtap19-4Q925H7 84 aa3.66□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 Lce1eQ9D139 143 aa3.66□□□□□ -1.82
Gtf3c1-204ENSMUST00000205659 Fat4Q2PZL6 4981 aa3.65□□□□□ -1.83
Gtf3c1-204ENSMUST00000205659 Krtap4-2B1AQ85 167 aa3.65□□□□□ -1.83
Gtf3c1-204ENSMUST00000205659 Krtap4-6Q3V4B7 195 aa3.62□□□□□ -1.83
Gtf3c1-204ENSMUST00000205659 Ubr4A2AN08 5180 aa3.56□□□□□ -1.84
Gtf3c1-204ENSMUST00000205659 Krtap17-1A2A5X6 109 aa3.55□□□□□ -1.84
Gtf3c1-204ENSMUST00000205659 Hmcn2A2AJ76 5100 aa3.54□□□□□ -1.84
Gtf3c1-204ENSMUST00000205659 Ush2AQ2QI47 5193 aa3.51□□□□□ -1.85
Gtf3c1-204ENSMUST00000205659 Krtap4-1Q3UUY3 169 aa3.5□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms