RNA–Protein interactions for RNA: ENSMUST00000205659.1

Gtf3c1-204, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Gtf3c1, Length 6,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-204ENSMUST00000205659 Rhox8Q6VSS7 320 aa20.09■□□□□ 0.81
Gtf3c1-204ENSMUST00000205659 NischQ80TM9 1593 aa18.63■□□□□ 0.57
Gtf3c1-204ENSMUST00000205659 Rpgrip1Q9EPQ2 1331 aa18.51■□□□□ 0.55
Gtf3c1-204ENSMUST00000205659 Ccdc136Q3TVA9 1136 aa18■□□□□ 0.47
Gtf3c1-204ENSMUST00000205659 Esf1Q3V1V3 845 aaKnown RBP17.82■□□□□ 0.44
Gtf3c1-204ENSMUST00000205659 Cngb1E1AZ71 1325 aa17.8■□□□□ 0.44
Gtf3c1-204ENSMUST00000205659 Las1lA2BE28 776 aaKnown RBP17.73■□□□□ 0.43
Gtf3c1-204ENSMUST00000205659 Ehmt2Q9Z148 1263 aaKnown RBP17.73■□□□□ 0.43
Gtf3c1-204ENSMUST00000205659 Trim41Q5NCC3 630 aa17.72■□□□□ 0.43
Gtf3c1-204ENSMUST00000205659 Abcc9P70170 1546 aa17.5■□□□□ 0.39
Gtf3c1-204ENSMUST00000205659 Gab3Q8BSM5 595 aa17.45■□□□□ 0.38
Gtf3c1-204ENSMUST00000205659 Npm2Q80W85 207 aa17.33■□□□□ 0.37
Gtf3c1-204ENSMUST00000205659 Zeb1Q64318 1117 aa17.3■□□□□ 0.36
Gtf3c1-204ENSMUST00000205659 Ccdc180J3QNE4 1664 aa17.3■□□□□ 0.36
Gtf3c1-204ENSMUST00000205659 Rtl1Q7M732 1744 aa17.29■□□□□ 0.36
Gtf3c1-204ENSMUST00000205659 Myt1lP97500 1187 aa17.15■□□□□ 0.34
Gtf3c1-204ENSMUST00000205659 Acin1Q9JIX8 1338 aaKnown RBP17.13■□□□□ 0.33
Gtf3c1-204ENSMUST00000205659 Abcc8B2RUS7 1588 aa17.13■□□□□ 0.33
Gtf3c1-204ENSMUST00000205659 Wdr66E9Q743 1299 aa17.11■□□□□ 0.33
Gtf3c1-204ENSMUST00000205659 Ube2uB1AUC4 352 aa17.08■□□□□ 0.32
Gtf3c1-204ENSMUST00000205659 Zcchc6Q5BLK4 1491 aaKnown RBP17.03■□□□□ 0.32
Gtf3c1-204ENSMUST00000205659 HrcG5E8J6 738 aa17■□□□□ 0.31
Gtf3c1-204ENSMUST00000205659 Pelp1Q9DBD5 1123 aaKnown RBP16.97■□□□□ 0.31
Gtf3c1-204ENSMUST00000205659 Gm35339A0A140LHH9 1649 aa16.94■□□□□ 0.3
Gtf3c1-204ENSMUST00000205659 CenpbP27790 599 aa16.88■□□□□ 0.29
Gtf3c1-204ENSMUST00000205659 UbtfP25976 765 aaKnown RBP16.77■□□□□ 0.27
Gtf3c1-204ENSMUST00000205659 NefmP08553 848 aa16.74■□□□□ 0.27
Gtf3c1-204ENSMUST00000205659 Il27Q8K3I6 234 aa16.74■□□□□ 0.27
Gtf3c1-204ENSMUST00000205659 Pcgf6Q99NA9 353 aa16.74■□□□□ 0.27
Gtf3c1-204ENSMUST00000205659 Myt1Q8CFC2 1127 aa16.67■□□□□ 0.26
Gtf3c1-204ENSMUST00000205659 Ap3b1Q9Z1T1 1105 aa16.41■□□□□ 0.22
Gtf3c1-204ENSMUST00000205659 Rb1cc1Q9ESK9 1588 aa16.41■□□□□ 0.22
Gtf3c1-204ENSMUST00000205659 Amer1Q7TS75 1132 aa16.36■□□□□ 0.21
Gtf3c1-204ENSMUST00000205659 Cdk11bP24788 784 aaKnown RBP16.34■□□□□ 0.21
Gtf3c1-204ENSMUST00000205659 Brd4Q9ESU6 1400 aaKnown RBP16.31■□□□□ 0.2
Gtf3c1-204ENSMUST00000205659 Stra8P70278 393 aa16.3■□□□□ 0.2
Gtf3c1-204ENSMUST00000205659 Supt5hO55201 1082 aaKnown RBP16.29■□□□□ 0.2
Gtf3c1-204ENSMUST00000205659 Fam50aQ9WV03 339 aaKnown RBP16.28■□□□□ 0.2
Gtf3c1-204ENSMUST00000205659 Npm1Q61937 292 aaKnown RBP16.23■□□□□ 0.19
Gtf3c1-204ENSMUST00000205659 NacadQ5SWP3 1504 aa16.21■□□□□ 0.19
Gtf3c1-204ENSMUST00000205659 Dcaf1Q80TR8 1506 aa16.16■□□□□ 0.18
Gtf3c1-204ENSMUST00000205659 Nop58Q6DFW4 536 aaKnown RBP16.14■□□□□ 0.17
Gtf3c1-204ENSMUST00000205659 Slc24a1Q91WD8 1130 aa16.13■□□□□ 0.17
Gtf3c1-204ENSMUST00000205659 Tnnt3Q9QZ47 272 aa16.09■□□□□ 0.17
Gtf3c1-204ENSMUST00000205659 NclP09405 707 aaKnown RBP16.08■□□□□ 0.17
Gtf3c1-204ENSMUST00000205659 Mier1Q5UAK0 511 aa16.08■□□□□ 0.17
Gtf3c1-204ENSMUST00000205659 DiexfQ8BTT6 772 aaKnown RBP16.07■□□□□ 0.16
Gtf3c1-204ENSMUST00000205659 Cep164Q5DU05 1446 aa16.06■□□□□ 0.16
Gtf3c1-204ENSMUST00000205659 TonslQ6NZL6 1363 aa16.06■□□□□ 0.16
Gtf3c1-204ENSMUST00000205659 Baz1aO88379 1555 aa16.04■□□□□ 0.16
Gtf3c1-204ENSMUST00000205659 Neurod1Q60867 357 aa16.03■□□□□ 0.16
Gtf3c1-204ENSMUST00000205659 Ttbk1Q6PCN3 1308 aa15.98■□□□□ 0.15
Gtf3c1-204ENSMUST00000205659 Plekhg3Q4VAC9 1341 aa15.98■□□□□ 0.15
Gtf3c1-204ENSMUST00000205659 Chic1Q8CBW7 227 aa15.98■□□□□ 0.15
Gtf3c1-204ENSMUST00000205659 Lmod2Q3UHZ5 550 aa15.96■□□□□ 0.15
Gtf3c1-204ENSMUST00000205659 Anp32bQ9EST5 272 aaKnown RBP15.94■□□□□ 0.14
Gtf3c1-204ENSMUST00000205659 NrdcQ8BHG1 1161 aa15.93■□□□□ 0.14
Gtf3c1-204ENSMUST00000205659 Rtl5Q5DTT4 599 aa15.9■□□□□ 0.14
Gtf3c1-204ENSMUST00000205659 Os9Q8K2C7 672 aa15.89■□□□□ 0.13
Gtf3c1-204ENSMUST00000205659 Kdm5dQ62240 1548 aa15.88■□□□□ 0.13
Gtf3c1-204ENSMUST00000205659 Clip1Q922J3 1391 aa15.86■□□□□ 0.13
Gtf3c1-204ENSMUST00000205659 Ppargc1bQ8VHJ7 1014 aa15.85■□□□□ 0.13
Gtf3c1-204ENSMUST00000205659 Ubl4bQ9CQ84 188 aa15.85■□□□□ 0.13
Gtf3c1-204ENSMUST00000205659 4933416C03RikQ3V063 378 aa15.82■□□□□ 0.12
Gtf3c1-204ENSMUST00000205659 Anks4bQ8K3X6 423 aa15.75■□□□□ 0.11
Gtf3c1-204ENSMUST00000205659 Golga3P55937 1487 aa15.74■□□□□ 0.11
Gtf3c1-204ENSMUST00000205659 Zbtb7cQ8VCZ7 619 aa15.72■□□□□ 0.11
Gtf3c1-204ENSMUST00000205659 Csrnp3P59055 597 aa15.71■□□□□ 0.11
Gtf3c1-204ENSMUST00000205659 ClspnQ80YR7 1315 aa15.69■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Eif5bQ05D44 1216 aaKnown RBP15.69■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Aplp2Q06335 707 aa15.68■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Hnrnpul2Q00PI9 745 aaKnown RBP15.66■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 NeflP08551 543 aa15.66■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Ercc6F8VPZ5 1481 aa15.65■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Anp32aO35381 247 aa15.65■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Ifnlr1Q8CGK5 535 aa15.65■□□□□ 0.1
Gtf3c1-204ENSMUST00000205659 Rsf1E9PWW9 1441 aaKnown RBP15.63■□□□□ 0.09
Gtf3c1-204ENSMUST00000205659 Kif15Q6P9L6 1387 aa15.59■□□□□ 0.09
Gtf3c1-204ENSMUST00000205659 Fkbp15Q6P9Q6 1216 aaKnown RBP15.58■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 Sall2Q9QX96 1004 aa15.58■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 Ccer2J3QPU5 274 aa15.58■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 4930567H17RikQ3V0K5 233 aa15.58■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 Gm38655A0A286YDK6 273 aa15.56■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 Eid3Q3V124 375 aa15.56■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 Hdac5Q9Z2V6 1113 aa15.53■□□□□ 0.08
Gtf3c1-204ENSMUST00000205659 BlmO88700 1416 aa15.52■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 Ccdc18Q640L5 1455 aa15.51■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 Gm13697A2AK42 830 aa15.51■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 Erich6D3Z6S9 713 aa15.51■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 Setd5Q5XJV7 1441 aa15.5■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 Sycp2Q9CUU3 1500 aa15.48■□□□□ 0.07
Gtf3c1-204ENSMUST00000205659 1700123L14RikQ3V2K7 440 aa15.43■□□□□ 0.06
Gtf3c1-204ENSMUST00000205659 Pds5bQ4VA53 1446 aaKnown RBP15.42■□□□□ 0.06
Gtf3c1-204ENSMUST00000205659 Chic2Q9D9G3 165 aa15.41■□□□□ 0.06
Gtf3c1-204ENSMUST00000205659 Zbtb4Q5F293 982 aa15.41■□□□□ 0.06
Gtf3c1-204ENSMUST00000205659 Crybg2B7ZCC2 1516 aa15.4■□□□□ 0.06
Gtf3c1-204ENSMUST00000205659 Atp1b4Q99ME6 356 aa15.38■□□□□ 0.05
Gtf3c1-204ENSMUST00000205659 Mapk8ip2Q9ERE9 830 aa15.38■□□□□ 0.05
Gtf3c1-204ENSMUST00000205659 Eea1Q8BL66 1411 aa15.37■□□□□ 0.05
Gtf3c1-204ENSMUST00000205659 Nlrp6Q91WS2 869 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms