RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Ush2AQ2QI47 5193 aa12.41□□□□□ -0.42
Smarcc1-203ENSMUST00000197480 Krtap3-1A2A591 98 aa12.37□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Gm17606F6ZL36 78 aa12.35□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Hmcn2A2AJ76 5100 aa12.35□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Krtap13-1Q8K198 168 aa12.34□□□□□ -0.43
Smarcc1-203ENSMUST00000197480 Krtap16-3Q8C1I6 86 aa12.3□□□□□ -0.44
Smarcc1-203ENSMUST00000197480 Crct1Q6PAI5 102 aa12.28□□□□□ -0.44
Smarcc1-203ENSMUST00000197480 Gm10382Q3V0T5 144 aa12.27□□□□□ -0.45
Smarcc1-203ENSMUST00000197480 Sec61gP60060 68 aa12.26□□□□□ -0.45
Smarcc1-203ENSMUST00000197480 Gm9789Q8BIG3 52 aa12.21□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Krtap19-1Q925H2 87 aa12.2□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Fam229aB2KGE5 128 aa12.17□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Prm1P02319 51 aa12.15□□□□□ -0.46
Smarcc1-203ENSMUST00000197480 Krtap19-3Q925H6 87 aa12.13□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Krtap1-5A2A590 122 aa12.13□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Gm10318A0A1W2P728 225 aa12.12□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Ubr4A2AN08 5180 aa12.11□□□□□ -0.47
Smarcc1-203ENSMUST00000197480 Gm7735D3YX18 52 aa12.07□□□□□ -0.48
Smarcc1-203ENSMUST00000197480 Krtap1-3A2A588 173 aa12.04□□□□□ -0.48
Smarcc1-203ENSMUST00000197480 4932415D10RikA0A1W2P6U8 4986 aa12.02□□□□□ -0.49
Smarcc1-203ENSMUST00000197480 Gm3646F6S692 53 aa11.98□□□□□ -0.49
Smarcc1-203ENSMUST00000197480 ZanO88799 5376 aa11.94□□□□□ -0.5
Smarcc1-203ENSMUST00000197480 Gm9955Q8CEJ8 102 aa11.94□□□□□ -0.5
Smarcc1-203ENSMUST00000197480 Gm20537G3UYK7 97 aa11.9□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 Gm19402J3QJV4 266 aa11.87□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 BC029722A0A0N4SW31 51 aa11.86□□□□□ -0.51
Smarcc1-203ENSMUST00000197480 Ndufs5Q99LY9 106 aa11.8□□□□□ -0.52
Smarcc1-203ENSMUST00000197480 LorP18165 486 aa11.72□□□□□ -0.53
Smarcc1-203ENSMUST00000197480 1700042G07RikB1AUF7 90 aa11.7□□□□□ -0.54
Smarcc1-203ENSMUST00000197480 Fat4Q2PZL6 4981 aa11.64□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Rnf213E9Q555 5152 aaKnown RBP11.62□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Gm19426M0QWC7 77 aa11.62□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Krtap1-4Q3V2D6 188 aa11.61□□□□□ -0.55
Smarcc1-203ENSMUST00000197480 Gm3880A0A1B0GSB3 72 aa11.53□□□□□ -0.56
Smarcc1-203ENSMUST00000197480 Pla2g10Q9QXX3 151 aa11.42□□□□□ -0.58
Smarcc1-203ENSMUST00000197480 Spink7Q6IE32 76 aa11.34□□□□□ -0.59
Smarcc1-203ENSMUST00000197480 B930094E09RikQ8C4T2 136 aa11.33□□□□□ -0.6
Smarcc1-203ENSMUST00000197480 Gm17402F6Z0L5 76 aa11.32□□□□□ -0.6
Smarcc1-203ENSMUST00000197480 CriptO70333 101 aa11.23□□□□□ -0.61
Smarcc1-203ENSMUST00000197480 SspoQ8CG65 4998 aa11.21□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Sprr2a3Q4KL71 83 aa11.19□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Sprr2a1Q9CQK8 83 aa11.19□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Lce1jD3YUU5 139 aa11.15□□□□□ -0.62
Smarcc1-203ENSMUST00000197480 Krtap12-1Q9Z287 130 aa11.1□□□□□ -0.63
Smarcc1-203ENSMUST00000197480 Gm12216A0A1W2P827 62 aa11.02□□□□□ -0.65
Smarcc1-203ENSMUST00000197480 Krtap19-9aF8WH65 55 aa10.97□□□□□ -0.65
Smarcc1-203ENSMUST00000197480 Romo1P60603 79 aa10.95□□□□□ -0.66
Smarcc1-203ENSMUST00000197480 Gm10061D3Z714 54 aa10.91□□□□□ -0.66
Smarcc1-203ENSMUST00000197480 Krtap17-1A2A5X6 109 aa10.83□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Gm21887J3QQ04 176 aa10.83□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Krtap19-2Q925I0 141 aa10.8□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Prm2P07978 107 aa10.79□□□□□ -0.68
Smarcc1-203ENSMUST00000197480 Krtap9-5A2A5X3 358 aa10.74□□□□□ -0.69
Smarcc1-203ENSMUST00000197480 Gm19668J3QMD1 248 aa10.58□□□□□ -0.72
Smarcc1-203ENSMUST00000197480 Lce1iQ9D6P5 149 aa10.48□□□□□ -0.73
Smarcc1-203ENSMUST00000197480 Camk2n1Q6QWF9 78 aa10.47□□□□□ -0.73
Smarcc1-203ENSMUST00000197480 Muc5bE9Q5I3 4800 aa10.43□□□□□ -0.74
Smarcc1-203ENSMUST00000197480 Gm11569B1AQB1 180 aa10.37□□□□□ -0.75
Smarcc1-203ENSMUST00000197480 Lce1a2Q9D1K4 149 aa10.35□□□□□ -0.75
Smarcc1-203ENSMUST00000197480 Gm6358A0A087WPH4 74 aa10.21□□□□□ -0.78
Smarcc1-203ENSMUST00000197480 Krtap8-1O08633 61 aa10.03□□□□□ -0.8
Smarcc1-203ENSMUST00000197480 Krtap7-1Q9D3I6 87 aa10.01□□□□□ -0.81
Smarcc1-203ENSMUST00000197480 Mt2P02798 61 aa9.97□□□□□ -0.81
Smarcc1-203ENSMUST00000197480 Krtap19-9bQ99NG9 58 aa9.94□□□□□ -0.82
Smarcc1-203ENSMUST00000197480 Gm40193A0A1B0GT39 78 aa9.82□□□□□ -0.84
Smarcc1-203ENSMUST00000197480 Mdn1A2ANY6 5589 aaKnown RBP9.66□□□□□ -0.86
Smarcc1-203ENSMUST00000197480 Mp68P56379 58 aa9.65□□□□□ -0.86
Smarcc1-203ENSMUST00000197480 Gm20538F6Z9R1 75 aa9.55□□□□□ -0.88
Smarcc1-203ENSMUST00000197480 Gm11555B1AQ89 175 aa9.52□□□□□ -0.88
Smarcc1-203ENSMUST00000197480 Lce1gQ9D195 139 aa9.52□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Tnp1P10856 55 aa9.51□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap4-2B1AQ85 167 aa9.5□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap4-6Q3V4B7 195 aa9.46□□□□□ -0.89
Smarcc1-203ENSMUST00000197480 Krtap9-3Q3V2C1 136 aa9.44□□□□□ -0.9
Smarcc1-203ENSMUST00000197480 Krtap22-2J3QNX6 67 aa9.43□□□□□ -0.9
Smarcc1-203ENSMUST00000197480 Lce1hQ9D6R3 140 aa9.36□□□□□ -0.91
Smarcc1-203ENSMUST00000197480 Gm11562A0PK51 136 aa9.29□□□□□ -0.92
Smarcc1-203ENSMUST00000197480 Krtap4-1Q3UUY3 169 aa9.28□□□□□ -0.92
Smarcc1-203ENSMUST00000197480 Gm11596B1AQB0 205 aa9.25□□□□□ -0.93
Smarcc1-203ENSMUST00000197480 Syne2Q6ZWQ0 6874 aaKnown RBP9.15□□□□□ -0.94
Smarcc1-203ENSMUST00000197480 2310046K23RikA0A0A6YVW6 87 aa9.04□□□□□ -0.96
Smarcc1-203ENSMUST00000197480 Ndufaf8A2AMZ4 74 aa9.02□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11564A2A4L9 201 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11563B1AQ90 168 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Gm11595B1AQA7 289 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Krtap4-8B1AQA8 209 aa9.01□□□□□ -0.97
Smarcc1-203ENSMUST00000197480 Mt4P47945 62 aa8.79□□□□□ -1
Smarcc1-203ENSMUST00000197480 Krtap4-9B1AQA9 244 aa8.78□□□□□ -1
Smarcc1-203ENSMUST00000197480 Gm10272F7CZ33 110 aa8.72□□□□□ -1.01
Smarcc1-203ENSMUST00000197480 Lce1bQ9D149 137 aa8.66□□□□□ -1.02
Smarcc1-203ENSMUST00000197480 Fsip2A2ARZ3 6995 aa8.56□□□□□ -1.04
Smarcc1-203ENSMUST00000197480 Gm38119A0A0A6YX29 146 aa8.55□□□□□ -1.04
Smarcc1-203ENSMUST00000197480 Krtap4-13Q9D7P3 165 aa8.46□□□□□ -1.06
Smarcc1-203ENSMUST00000197480 Krtap4-7Q9D732 168 aa8.35□□□□□ -1.07
Smarcc1-203ENSMUST00000197480 2300003K06RikA2A4M0 262 aa8.35□□□□□ -1.07
Smarcc1-203ENSMUST00000197480 Syne1Q6ZWR6 8799 aa8.32□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 Gm11938Q9D3H4 131 aa8.31□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 Sprr2kO70562 68 aa8.29□□□□□ -1.08
Smarcc1-203ENSMUST00000197480 A0A1Y7VJH8 109 aa8.23□□□□□ -1.09
Smarcc1-203ENSMUST00000197480 Lce3bQ9CQM7 98 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 111.3 ms