RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 NischQ80TM9 1593 aa52.08■■■■■ 5.93
Smarcc1-203ENSMUST00000197480 Gm35339A0A140LHH9 1649 aa52.03■■■■■ 5.92
Smarcc1-203ENSMUST00000197480 Abcc9P70170 1546 aa50.59■■■■■ 5.69
Smarcc1-203ENSMUST00000197480 Abcc8B2RUS7 1588 aa49.86■■■■■ 5.57
Smarcc1-203ENSMUST00000197480 ScribQ80U72 1612 aa47.17■■■■■ 5.14
Smarcc1-203ENSMUST00000197480 Rhox8Q6VSS7 320 aa46.66■■■■■ 5.06
Smarcc1-203ENSMUST00000197480 Dcaf1Q80TR8 1506 aa46.33■■■■■ 5.01
Smarcc1-203ENSMUST00000197480 Kdm5dQ62240 1548 aa45.98■■■■■ 4.95
Smarcc1-203ENSMUST00000197480 NacadQ5SWP3 1504 aa45.79■■■■■ 4.92
Smarcc1-203ENSMUST00000197480 Rb1cc1Q9ESK9 1588 aa45.56■■■■■ 4.88
Smarcc1-203ENSMUST00000197480 Ccdc180J3QNE4 1664 aa45.16■■■■■ 4.82
Smarcc1-203ENSMUST00000197480 Rtl1Q7M732 1744 aa45.15■■■■■ 4.82
Smarcc1-203ENSMUST00000197480 Baz1aO88379 1555 aa45.01■■■■■ 4.8
Smarcc1-203ENSMUST00000197480 Sycp2Q9CUU3 1500 aa44.84■■■■■ 4.77
Smarcc1-203ENSMUST00000197480 Crybg2B7ZCC2 1516 aa44.47■■■■■ 4.71
Smarcc1-203ENSMUST00000197480 Zcchc6Q5BLK4 1491 aaKnown RBP44.09■■■■■ 4.65
Smarcc1-203ENSMUST00000197480 BicraF8VPZ9 1578 aa44■■■■■ 4.63
Smarcc1-203ENSMUST00000197480 Smarca2Q6DIC0 1577 aa43.89■■■■■ 4.62
Smarcc1-203ENSMUST00000197480 Ccdc136Q3TVA9 1136 aa43.41■■■■■ 4.54
Smarcc1-203ENSMUST00000197480 Cecr2E9Q2Z1 1453 aa43.09■■■■■ 4.49
Smarcc1-203ENSMUST00000197480 Trim41Q5NCC3 630 aa42.71■■■■■ 4.43
Smarcc1-203ENSMUST00000197480 Brd4Q9ESU6 1400 aaKnown RBP42.69■■■■■ 4.42
Smarcc1-203ENSMUST00000197480 Smarca4Q3TKT4 1613 aaKnown RBP42.64■■■■■ 4.42
Smarcc1-203ENSMUST00000197480 Synj1Q8CHC4 1574 aa42.51■■■■■ 4.4
Smarcc1-203ENSMUST00000197480 CftrP26361 1476 aa42.37■■■■■ 4.37
Smarcc1-203ENSMUST00000197480 Pds5bQ4VA53 1446 aaKnown RBP42.31■■■■■ 4.36
Smarcc1-203ENSMUST00000197480 Cttnbp2B9EJA2 1648 aa42.29■■■■■ 4.36
Smarcc1-203ENSMUST00000197480 Atad2bE9Q166 1460 aaKnown RBP42.28■■■■■ 4.36
Smarcc1-203ENSMUST00000197480 Iqgap2Q3UQ44 1575 aa42.19■■■■■ 4.34
Smarcc1-203ENSMUST00000197480 HrcG5E8J6 738 aa41.96■■■■■ 4.31
Smarcc1-203ENSMUST00000197480 Golga3P55937 1487 aa41.82■■■■■ 4.28
Smarcc1-203ENSMUST00000197480 Esf1Q3V1V3 845 aaKnown RBP41.71■■■■■ 4.27
Smarcc1-203ENSMUST00000197480 Cngb1E1AZ71 1325 aa41.67■■■■■ 4.26
Smarcc1-203ENSMUST00000197480 Top2bQ64511 1612 aa41.61■■■■■ 4.25
Smarcc1-203ENSMUST00000197480 Wdr62Q3U3T8 1523 aa41.55■■■■■ 4.24
Smarcc1-203ENSMUST00000197480 Ercc6F8VPZ5 1481 aa41.5■■■■■ 4.23
Smarcc1-203ENSMUST00000197480 Frmpd1A2AKB4 1549 aa41.5■■■■■ 4.23
Smarcc1-203ENSMUST00000197480 Thoc2B1AZI6 1594 aaKnown RBP41.4■■■■■ 4.22
Smarcc1-203ENSMUST00000197480 Rsf1E9PWW9 1441 aaKnown RBP41.26■■■■■ 4.2
Smarcc1-203ENSMUST00000197480 Cep164Q5DU05 1446 aa41.25■■■■■ 4.19
Smarcc1-203ENSMUST00000197480 Cc2d2aQ8CFW7 1633 aa41.22■■■■■ 4.19
Smarcc1-203ENSMUST00000197480 Ccdc88bQ4QRL3 1481 aa41.2■■■■■ 4.19
Smarcc1-203ENSMUST00000197480 Unc13aQ4KUS2 1712 aa41.11■■■■■ 4.17
Smarcc1-203ENSMUST00000197480 Chic1Q8CBW7 227 aa41.1■■■■■ 4.17
Smarcc1-203ENSMUST00000197480 Fmn1Q05860 1466 aa40.99■■■■■ 4.15
Smarcc1-203ENSMUST00000197480 TnnQ80Z71 1560 aa40.81■■■■■ 4.12
Smarcc1-203ENSMUST00000197480 Phldb1Q6PDH0 1371 aaKnown RBP40.81■■■■■ 4.12
Smarcc1-203ENSMUST00000197480 Fam135aQ6NS59 1506 aa40.78■■■■■ 4.12
Smarcc1-203ENSMUST00000197480 Lamc3Q9R0B6 1581 aa40.74■■■■■ 4.11
Smarcc1-203ENSMUST00000197480 Top2aQ01320 1528 aaKnown RBP40.6■■■■■ 4.09
Smarcc1-203ENSMUST00000197480 Kif15Q6P9L6 1387 aa40.56■■■■■ 4.08
Smarcc1-203ENSMUST00000197480 Gab3Q8BSM5 595 aa40.41■■■■■ 4.06
Smarcc1-203ENSMUST00000197480 Ubl4bQ9CQ84 188 aa40.38■■■■■ 4.05
Smarcc1-203ENSMUST00000197480 Dnajc5bQ9CQ94 199 aa40.36■■■■■ 4.05
Smarcc1-203ENSMUST00000197480 Camsap1A2AHC3 1581 aa40.23■■■■■ 4.03
Smarcc1-203ENSMUST00000197480 Baz1bQ9Z277 1479 aa40.16■■■■■ 4.02
Smarcc1-203ENSMUST00000197480 Cux2P70298 1426 aa40.16■■■■■ 4.02
Smarcc1-203ENSMUST00000197480 Ccdc18Q640L5 1455 aa40.09■■■■■ 4.01
Smarcc1-203ENSMUST00000197480 Rapgef2Q8CHG7 1496 aa40.07■■■■■ 4
Smarcc1-203ENSMUST00000197480 Il27Q8K3I6 234 aa40■■■■□ 3.99
Smarcc1-203ENSMUST00000197480 Mrc2Q64449 1479 aa39.84■■■■□ 3.97
Smarcc1-203ENSMUST00000197480 Grin2bQ01097 1482 aa39.83■■■■□ 3.97
Smarcc1-203ENSMUST00000197480 Npm1Q61937 292 aaKnown RBP39.8■■■■□ 3.96
Smarcc1-203ENSMUST00000197480 NrkQ9R0G8 1455 aa39.78■■■■□ 3.96
Smarcc1-203ENSMUST00000197480 PtprkP35822 1457 aa39.75■■■■□ 3.95
Smarcc1-203ENSMUST00000197480 Cep162Q6ZQ06 1403 aa39.73■■■■□ 3.95
Smarcc1-203ENSMUST00000197480 Shroom4Q1W617 1475 aa39.7■■■■□ 3.95
Smarcc1-203ENSMUST00000197480 Eif4g1Q6NZJ6 1600 aaKnown RBP39.68■■■■□ 3.94
Smarcc1-203ENSMUST00000197480 Npm2Q80W85 207 aa39.65■■■■□ 3.94
Smarcc1-203ENSMUST00000197480 LrpprcQ6PB66 1392 aaKnown RBP39.64■■■■□ 3.94
Smarcc1-203ENSMUST00000197480 PogzQ8BZH4 1409 aaKnown RBP39.55■■■■□ 3.92
Smarcc1-203ENSMUST00000197480 Kif21aQ9QXL2 1672 aa39.55■■■■□ 3.92
Smarcc1-203ENSMUST00000197480 Ehmt2Q9Z148 1263 aaKnown RBP39.51■■■■□ 3.92
Smarcc1-203ENSMUST00000197480 Arhgap35Q91YM2 1499 aa39.46■■■■□ 3.91
Smarcc1-203ENSMUST00000197480 Duox2A2AQ99 1517 aa39.43■■■■□ 3.9
Smarcc1-203ENSMUST00000197480 Dhx29Q6PGC1 1365 aaKnown RBP39.43■■■■□ 3.9
Smarcc1-203ENSMUST00000197480 Efcab5A0JP43 1406 aa39.41■■■■□ 3.9
Smarcc1-203ENSMUST00000197480 Myt1lP97500 1187 aa39.32■■■■□ 3.89
Smarcc1-203ENSMUST00000197480 Crocc2F6XLV1 1638 aa39.29■■■■□ 3.88
Smarcc1-203ENSMUST00000197480 Map3k1P53349 1493 aa39.29■■■■□ 3.88
Smarcc1-203ENSMUST00000197480 Mroh2bQ7M6Y6 1581 aa39.25■■■■□ 3.87
Smarcc1-203ENSMUST00000197480 Samd9lQ69Z37 1561 aa39.21■■■■□ 3.87
Smarcc1-203ENSMUST00000197480 Zeb1Q64318 1117 aa39.1■■■■□ 3.85
Smarcc1-203ENSMUST00000197480 AqrQ8CFQ3 1481 aaKnown RBP39.04■■■■□ 3.84
Smarcc1-203ENSMUST00000197480 SynmQ70IV5 1561 aa39■■■■□ 3.83
Smarcc1-203ENSMUST00000197480 Clip1Q922J3 1391 aa38.99■■■■□ 3.83
Smarcc1-203ENSMUST00000197480 Plb1Q3TTY0 1478 aa38.99■■■■□ 3.83
Smarcc1-203ENSMUST00000197480 Urb2E9Q7L1 1524 aaKnown RBP38.96■■■■□ 3.83
Smarcc1-203ENSMUST00000197480 Lrriq1Q0P5X1 1673 aa38.92■■■■□ 3.82
Smarcc1-203ENSMUST00000197480 Rad54l2Q99NG0 1466 aa38.9■■■■□ 3.82
Smarcc1-203ENSMUST00000197480 Carmil1Q6EDY6 1374 aa38.86■■■■□ 3.81
Smarcc1-203ENSMUST00000197480 Eea1Q8BL66 1411 aa38.76■■■■□ 3.8
Smarcc1-203ENSMUST00000197480 Acin1Q9JIX8 1338 aaKnown RBP38.74■■■■□ 3.79
Smarcc1-203ENSMUST00000197480 Disp1Q3TDN0 1521 aa38.72■■■■□ 3.79
Smarcc1-203ENSMUST00000197480 Ankrd26Q811D2 1581 aa38.72■■■■□ 3.79
Smarcc1-203ENSMUST00000197480 Magi3Q9EQJ9 1476 aa38.72■■■■□ 3.79
Smarcc1-203ENSMUST00000197480 Ift140E9PY46 1464 aa38.69■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Pla2r1Q62028 1487 aa38.69■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Erich3F6QRE9 1637 aa38.68■■■■□ 3.78
Smarcc1-203ENSMUST00000197480 Setd5Q5XJV7 1441 aa38.66■■■■□ 3.78
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms