RNA–Protein interactions for RNA: ENSMUST00000197407.4

Nub1-202, Transcript of NEDD8 ultimate buster 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nub1, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1-202ENSMUST00000197407 Dync1h1Q9JHU4 4644 aaKnown RBP6.23□□□□□ -1.41
Nub1-202ENSMUST00000197407 BC029722A0A0N4SW31 51 aa6.21□□□□□ -1.41
Nub1-202ENSMUST00000197407 Vps13bQ80TY5 3993 aa6.21□□□□□ -1.41
Nub1-202ENSMUST00000197407 Fat3Q8BNA6 4555 aa6.21□□□□□ -1.41
Nub1-202ENSMUST00000197407 Gm17416Q30KP4 66 aa6.17□□□□□ -1.42
Nub1-202ENSMUST00000197407 Gm19668J3QMD1 248 aa6.16□□□□□ -1.42
Nub1-202ENSMUST00000197407 Mycbp2Q7TPH6 4711 aa6.11□□□□□ -1.43
Nub1-202ENSMUST00000197407 2210017I01RikA0A0A6YVV1 95 aa6.1□□□□□ -1.43
Nub1-202ENSMUST00000197407 SacsQ9JLC8 4582 aa6.1□□□□□ -1.43
Nub1-202ENSMUST00000197407 HydinQ80W93 5154 aa6.09□□□□□ -1.43
Nub1-202ENSMUST00000197407 Fat2Q5F226 4351 aa6.06□□□□□ -1.44
Nub1-202ENSMUST00000197407 Gm17402F6Z0L5 76 aa6.06□□□□□ -1.44
Nub1-202ENSMUST00000197407 Sec61bQ9CQS8 96 aaKnown RBP6.05□□□□□ -1.44
Nub1-202ENSMUST00000197407 Kiaa1109A2AAE1 5005 aa6.01□□□□□ -1.45
Nub1-202ENSMUST00000197407 Abca13Q5SSE9 5034 aa6.01□□□□□ -1.45
Nub1-202ENSMUST00000197407 Gm10318A0A1W2P728 225 aa6□□□□□ -1.45
Nub1-202ENSMUST00000197407 Spink7Q6IE32 76 aa5.97□□□□□ -1.45
Nub1-202ENSMUST00000197407 Pkhd1E9PZ36 4059 aa5.94□□□□□ -1.46
Nub1-202ENSMUST00000197407 Pkhd1l1Q80ZA4 4249 aa5.94□□□□□ -1.46
Nub1-202ENSMUST00000197407 Lrp2A2ARV4 4660 aa5.94□□□□□ -1.46
Nub1-202ENSMUST00000197407 Herc2Q4U2R1 4836 aa5.94□□□□□ -1.46
Nub1-202ENSMUST00000197407 Krtap13-1Q8K198 168 aa5.91□□□□□ -1.46
Nub1-202ENSMUST00000197407 Camk2n1Q6QWF9 78 aa5.9□□□□□ -1.46
Nub1-202ENSMUST00000197407 Crct1Q6PAI5 102 aa5.89□□□□□ -1.47
Nub1-202ENSMUST00000197407 Ryr2E9Q401 4966 aaKnown RBP5.89□□□□□ -1.47
Nub1-202ENSMUST00000197407 Gm19402J3QJV4 266 aa5.86□□□□□ -1.47
Nub1-202ENSMUST00000197407 Kmt2cQ8BRH4 4903 aa5.83□□□□□ -1.48
Nub1-202ENSMUST00000197407 Sprr2a3Q4KL71 83 aa5.73□□□□□ -1.49
Nub1-202ENSMUST00000197407 Sprr2a1Q9CQK8 83 aa5.73□□□□□ -1.49
Nub1-202ENSMUST00000197407 Tnp1P10856 55 aa5.7□□□□□ -1.5
Nub1-202ENSMUST00000197407 Dnah8Q91XQ0 4731 aa5.69□□□□□ -1.5
Nub1-202ENSMUST00000197407 PcloQ9QYX7 5068 aa5.68□□□□□ -1.5
Nub1-202ENSMUST00000197407 Dnhd1D3Z2X2 4750 aa5.65□□□□□ -1.5
Nub1-202ENSMUST00000197407 Krtap1-5A2A590 122 aa5.54□□□□□ -1.52
Nub1-202ENSMUST00000197407 Herc1E9PZP8 4859 aa5.49□□□□□ -1.53
Nub1-202ENSMUST00000197407 Birc6O88738 4882 aa5.45□□□□□ -1.54
Nub1-202ENSMUST00000197407 Ubr4A2AN08 5180 aa5.4□□□□□ -1.55
Nub1-202ENSMUST00000197407 Krtap16-3Q8C1I6 86 aa5.37□□□□□ -1.55
Nub1-202ENSMUST00000197407 LorP18165 486 aa5.3□□□□□ -1.56
Nub1-202ENSMUST00000197407 Fat4Q2PZL6 4981 aa5.27□□□□□ -1.57
Nub1-202ENSMUST00000197407 Krtap19-3Q925H6 87 aa5.27□□□□□ -1.57
Nub1-202ENSMUST00000197407 Krtap19-1Q925H2 87 aa5.24□□□□□ -1.57
Nub1-202ENSMUST00000197407 ZanO88799 5376 aa5.22□□□□□ -1.57
Nub1-202ENSMUST00000197407 Gm18596A0A1W2P860 280 aa5.21□□□□□ -1.58
Nub1-202ENSMUST00000197407 Krtap1-4Q3V2D6 188 aa5.19□□□□□ -1.58
Nub1-202ENSMUST00000197407 Lce1mQ9CR91 182 aa5.18□□□□□ -1.58
Nub1-202ENSMUST00000197407 2310046K23RikA0A0A6YVW6 87 aa5.17□□□□□ -1.58
Nub1-202ENSMUST00000197407 Ush2AQ2QI47 5193 aa5.13□□□□□ -1.59
Nub1-202ENSMUST00000197407 4932415D10RikA0A1W2P6U8 4986 aa5.09□□□□□ -1.6
Nub1-202ENSMUST00000197407 Rnf213E9Q555 5152 aaKnown RBP5.07□□□□□ -1.6
Nub1-202ENSMUST00000197407 Hmcn2A2AJ76 5100 aa5.05□□□□□ -1.6
Nub1-202ENSMUST00000197407 Krtap1-3A2A588 173 aa5.04□□□□□ -1.6
Nub1-202ENSMUST00000197407 Lce1jD3YUU5 139 aa5.03□□□□□ -1.6
Nub1-202ENSMUST00000197407 Krtap12-1Q9Z287 130 aa5.02□□□□□ -1.61
Nub1-202ENSMUST00000197407 Krtap19-9aF8WH65 55 aa4.99□□□□□ -1.61
Nub1-202ENSMUST00000197407 4933428G20RikQ9D3X4 101 aa4.93□□□□□ -1.62
Nub1-202ENSMUST00000197407 Krtap8-1O08633 61 aa4.93□□□□□ -1.62
Nub1-202ENSMUST00000197407 Krtap17-1A2A5X6 109 aa4.88□□□□□ -1.63
Nub1-202ENSMUST00000197407 Krtap19-9bQ99NG9 58 aa4.88□□□□□ -1.63
Nub1-202ENSMUST00000197407 Mdn1A2ANY6 5589 aaKnown RBP4.85□□□□□ -1.63
Nub1-202ENSMUST00000197407 Krtap9-5A2A5X3 358 aa4.81□□□□□ -1.64
Nub1-202ENSMUST00000197407 Gm9789Q8BIG3 52 aa4.8□□□□□ -1.64
Nub1-202ENSMUST00000197407 Gm7735D3YX18 52 aa4.78□□□□□ -1.64
Nub1-202ENSMUST00000197407 Prm1P02319 51 aa4.74□□□□□ -1.65
Nub1-202ENSMUST00000197407 Krtap19-2Q925I0 141 aa4.72□□□□□ -1.65
Nub1-202ENSMUST00000197407 Krtap9-3Q3V2C1 136 aa4.66□□□□□ -1.66
Nub1-202ENSMUST00000197407 Lce1iQ9D6P5 149 aa4.65□□□□□ -1.67
Nub1-202ENSMUST00000197407 Lce1dQ9D731 133 aa4.63□□□□□ -1.67
Nub1-202ENSMUST00000197407 Lce1a2Q9D1K4 149 aa4.61□□□□□ -1.67
Nub1-202ENSMUST00000197407 Lce1hQ9D6R3 140 aa4.6□□□□□ -1.67
Nub1-202ENSMUST00000197407 Sprr2gO70558 76 aa4.59□□□□□ -1.68
Nub1-202ENSMUST00000197407 Mt2P02798 61 aa4.52□□□□□ -1.69
Nub1-202ENSMUST00000197407 Gm10061D3Z714 54 aa4.5□□□□□ -1.69
Nub1-202ENSMUST00000197407 Gm11938Q9D3H4 131 aa4.5□□□□□ -1.69
Nub1-202ENSMUST00000197407 Gm6358A0A087WPH4 74 aa4.44□□□□□ -1.7
Nub1-202ENSMUST00000197407 SspoQ8CG65 4998 aa4.42□□□□□ -1.7
Nub1-202ENSMUST00000197407 Lce1eQ9D139 143 aa4.42□□□□□ -1.7
Nub1-202ENSMUST00000197407 Sprr2dO70555 85 aa4.39□□□□□ -1.71
Nub1-202ENSMUST00000197407 Krtap31-1Q9D644 177 aa4.34□□□□□ -1.72
Nub1-202ENSMUST00000197407 Gm11569B1AQB1 180 aa4.3□□□□□ -1.72
Nub1-202ENSMUST00000197407 Gm10100J3QK64 120 aa4.3□□□□□ -1.72
Nub1-202ENSMUST00000197407 Gm10272F7CZ33 110 aa4.28□□□□□ -1.72
Nub1-202ENSMUST00000197407 Sprr2iO70560 76 aa4.26□□□□□ -1.73
Nub1-202ENSMUST00000197407 Krtap22-2J3QNX6 67 aa4.26□□□□□ -1.73
Nub1-202ENSMUST00000197407 Muc5bE9Q5I3 4800 aa4.24□□□□□ -1.73
Nub1-202ENSMUST00000197407 Fsip2A2ARZ3 6995 aa4.23□□□□□ -1.73
Nub1-202ENSMUST00000197407 Gm10142J3KMP7 120 aa4.22□□□□□ -1.73
Nub1-202ENSMUST00000197407 A0A1Y7VJH8 109 aa4.16□□□□□ -1.74
Nub1-202ENSMUST00000197407 Syne1Q6ZWR6 8799 aa4.16□□□□□ -1.74
Nub1-202ENSMUST00000197407 Lce3bQ9CQM7 98 aa4.15□□□□□ -1.75
Nub1-202ENSMUST00000197407 Lce1cQ9D1C5 147 aa4.13□□□□□ -1.75
Nub1-202ENSMUST00000197407 Sprr2fO70557 76 aa4.09□□□□□ -1.76
Nub1-202ENSMUST00000197407 Krtap19-4Q925H7 84 aa4.07□□□□□ -1.76
Nub1-202ENSMUST00000197407 Lce3cQ91V05 98 aa4.06□□□□□ -1.76
Nub1-202ENSMUST00000197407 Krtap4-6Q3V4B7 195 aa4.05□□□□□ -1.76
Nub1-202ENSMUST00000197407 Lce3dE9Q8V1 98 aa4.04□□□□□ -1.76
Nub1-202ENSMUST00000197407 Gm11562A0PK51 136 aa4.01□□□□□ -1.77
Nub1-202ENSMUST00000197407 Gm38119A0A0A6YX29 146 aa4□□□□□ -1.77
Nub1-202ENSMUST00000197407 Krtap28-10A0A1Y7VP58 119 aa4□□□□□ -1.77
Nub1-202ENSMUST00000197407 Lce1fB9EJP6 147 aa3.99□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms