RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Krtap3-1A2A591 98 aa6.72□□□□□ -1.33
Pdlim5-208ENSMUST00000196220 Gm10382Q3V0T5 144 aa6.7□□□□□ -1.34
Pdlim5-208ENSMUST00000196220 Sec61bQ9CQS8 96 aaKnown RBP6.67□□□□□ -1.34
Pdlim5-208ENSMUST00000196220 HydinQ80W93 5154 aa6.65□□□□□ -1.35
Pdlim5-208ENSMUST00000196220 Lrp2A2ARV4 4660 aa6.62□□□□□ -1.35
Pdlim5-208ENSMUST00000196220 Gm3880A0A1B0GSB3 72 aa6.53□□□□□ -1.36
Pdlim5-208ENSMUST00000196220 Krtap13-1Q8K198 168 aa6.53□□□□□ -1.36
Pdlim5-208ENSMUST00000196220 BC029722A0A0N4SW31 51 aa6.49□□□□□ -1.37
Pdlim5-208ENSMUST00000196220 Krtap1-5A2A590 122 aa6.46□□□□□ -1.38
Pdlim5-208ENSMUST00000196220 2310057N15RikQ9D6T8 200 aa6.44□□□□□ -1.38
Pdlim5-208ENSMUST00000196220 Fam229aB2KGE5 128 aa6.41□□□□□ -1.38
Pdlim5-208ENSMUST00000196220 Gm17402F6Z0L5 76 aa6.39□□□□□ -1.39
Pdlim5-208ENSMUST00000196220 Gm12216A0A1W2P827 62 aa6.37□□□□□ -1.39
Pdlim5-208ENSMUST00000196220 Romo1P60603 79 aa6.35□□□□□ -1.39
Pdlim5-208ENSMUST00000196220 Krtap16-3Q8C1I6 86 aa6.31□□□□□ -1.4
Pdlim5-208ENSMUST00000196220 B930094E09RikQ8C4T2 136 aa6.31□□□□□ -1.4
Pdlim5-208ENSMUST00000196220 PcloQ9QYX7 5068 aa6.3□□□□□ -1.4
Pdlim5-208ENSMUST00000196220 Krtap19-1Q925H2 87 aa6.27□□□□□ -1.41
Pdlim5-208ENSMUST00000196220 Lce1mQ9CR91 182 aa6.27□□□□□ -1.41
Pdlim5-208ENSMUST00000196220 Gm19426M0QWC7 77 aa6.23□□□□□ -1.41
Pdlim5-208ENSMUST00000196220 Herc1E9PZP8 4859 aa6.23□□□□□ -1.41
Pdlim5-208ENSMUST00000196220 Krtap19-3Q925H6 87 aa6.2□□□□□ -1.42
Pdlim5-208ENSMUST00000196220 CriptO70333 101 aa6.13□□□□□ -1.43
Pdlim5-208ENSMUST00000196220 Sprr2a3Q4KL71 83 aa6.13□□□□□ -1.43
Pdlim5-208ENSMUST00000196220 Sprr2a1Q9CQK8 83 aa6.13□□□□□ -1.43
Pdlim5-208ENSMUST00000196220 Crct1Q6PAI5 102 aa6.1□□□□□ -1.43
Pdlim5-208ENSMUST00000196220 Gm19402J3QJV4 266 aa6.08□□□□□ -1.44
Pdlim5-208ENSMUST00000196220 Gm21887J3QQ04 176 aa6.07□□□□□ -1.44
Pdlim5-208ENSMUST00000196220 Spink7Q6IE32 76 aa6.07□□□□□ -1.44
Pdlim5-208ENSMUST00000196220 Hmcn2A2AJ76 5100 aa6.04□□□□□ -1.44
Pdlim5-208ENSMUST00000196220 Krtap1-4Q3V2D6 188 aa6.03□□□□□ -1.44
Pdlim5-208ENSMUST00000196220 Gm10318A0A1W2P728 225 aa6.02□□□□□ -1.45
Pdlim5-208ENSMUST00000196220 Ush2AQ2QI47 5193 aa6.01□□□□□ -1.45
Pdlim5-208ENSMUST00000196220 Krtap1-3A2A588 173 aa5.99□□□□□ -1.45
Pdlim5-208ENSMUST00000196220 Gm9789Q8BIG3 52 aa5.99□□□□□ -1.45
Pdlim5-208ENSMUST00000196220 Prm1P02319 51 aa5.96□□□□□ -1.45
Pdlim5-208ENSMUST00000196220 4932415D10RikA0A1W2P6U8 4986 aa5.95□□□□□ -1.46
Pdlim5-208ENSMUST00000196220 ZanO88799 5376 aa5.92□□□□□ -1.46
Pdlim5-208ENSMUST00000196220 Gm18596A0A1W2P860 280 aa5.89□□□□□ -1.47
Pdlim5-208ENSMUST00000196220 Gm7735D3YX18 52 aa5.87□□□□□ -1.47
Pdlim5-208ENSMUST00000196220 Gm40193A0A1B0GT39 78 aa5.86□□□□□ -1.47
Pdlim5-208ENSMUST00000196220 Ubr4A2AN08 5180 aa5.83□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Rnf213E9Q555 5152 aaKnown RBP5.83□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Krtap7-1Q9D3I6 87 aa5.79□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 LorP18165 486 aa5.79□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Krtap12-1Q9Z287 130 aa5.79□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Krtap19-9aF8WH65 55 aa5.78□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Camk2n1Q6QWF9 78 aa5.78□□□□□ -1.48
Pdlim5-208ENSMUST00000196220 Fat4Q2PZL6 4981 aa5.77□□□□□ -1.49
Pdlim5-208ENSMUST00000196220 Gm19668J3QMD1 248 aa5.76□□□□□ -1.49
Pdlim5-208ENSMUST00000196220 Mp68P56379 58 aa5.74□□□□□ -1.49
Pdlim5-208ENSMUST00000196220 Lce1jD3YUU5 139 aa5.73□□□□□ -1.49
Pdlim5-208ENSMUST00000196220 Gm20538F6Z9R1 75 aa5.68□□□□□ -1.5
Pdlim5-208ENSMUST00000196220 SspoQ8CG65 4998 aa5.64□□□□□ -1.51
Pdlim5-208ENSMUST00000196220 Prm2P07978 107 aa5.57□□□□□ -1.52
Pdlim5-208ENSMUST00000196220 Krtap19-2Q925I0 141 aa5.5□□□□□ -1.53
Pdlim5-208ENSMUST00000196220 Krtap8-1O08633 61 aa5.45□□□□□ -1.54
Pdlim5-208ENSMUST00000196220 Krtap9-5A2A5X3 358 aa5.43□□□□□ -1.54
Pdlim5-208ENSMUST00000196220 Tnp1P10856 55 aa5.41□□□□□ -1.54
Pdlim5-208ENSMUST00000196220 Lce1iQ9D6P5 149 aa5.4□□□□□ -1.55
Pdlim5-208ENSMUST00000196220 Krtap19-9bQ99NG9 58 aa5.38□□□□□ -1.55
Pdlim5-208ENSMUST00000196220 Krtap17-1A2A5X6 109 aa5.37□□□□□ -1.55
Pdlim5-208ENSMUST00000196220 Gm10061D3Z714 54 aa5.35□□□□□ -1.55
Pdlim5-208ENSMUST00000196220 Lce1a2Q9D1K4 149 aa5.33□□□□□ -1.56
Pdlim5-208ENSMUST00000196220 Muc5bE9Q5I3 4800 aa5.27□□□□□ -1.57
Pdlim5-208ENSMUST00000196220 Ndufaf8A2AMZ4 74 aa5.26□□□□□ -1.57
Pdlim5-208ENSMUST00000196220 2310046K23RikA0A0A6YVW6 87 aa5.17□□□□□ -1.58
Pdlim5-208ENSMUST00000196220 Gm6358A0A087WPH4 74 aa5.17□□□□□ -1.58
Pdlim5-208ENSMUST00000196220 Mt2P02798 61 aa5.12□□□□□ -1.59
Pdlim5-208ENSMUST00000196220 Gm11569B1AQB1 180 aa4.98□□□□□ -1.61
Pdlim5-208ENSMUST00000196220 Krtap9-3Q3V2C1 136 aa4.98□□□□□ -1.61
Pdlim5-208ENSMUST00000196220 Lce1hQ9D6R3 140 aa4.96□□□□□ -1.62
Pdlim5-208ENSMUST00000196220 Krtap22-2J3QNX6 67 aa4.86□□□□□ -1.63
Pdlim5-208ENSMUST00000196220 Gm9112A2AI92 75 aa4.75□□□□□ -1.65
Pdlim5-208ENSMUST00000196220 Mdn1A2ANY6 5589 aaKnown RBP4.7□□□□□ -1.66
Pdlim5-208ENSMUST00000196220 Sprr2gO70558 76 aa4.6□□□□□ -1.67
Pdlim5-208ENSMUST00000196220 Sprr2dO70555 85 aa4.58□□□□□ -1.68
Pdlim5-208ENSMUST00000196220 Gm11555B1AQ89 175 aa4.57□□□□□ -1.68
Pdlim5-208ENSMUST00000196220 Gm10272F7CZ33 110 aa4.57□□□□□ -1.68
Pdlim5-208ENSMUST00000196220 Gm11562A0PK51 136 aa4.54□□□□□ -1.68
Pdlim5-208ENSMUST00000196220 Gm11938Q9D3H4 131 aa4.54□□□□□ -1.68
Pdlim5-208ENSMUST00000196220 4933428G20RikQ9D3X4 101 aa4.51□□□□□ -1.69
Pdlim5-208ENSMUST00000196220 Lce1dQ9D731 133 aa4.49□□□□□ -1.69
Pdlim5-208ENSMUST00000196220 Krtap4-6Q3V4B7 195 aa4.49□□□□□ -1.69
Pdlim5-208ENSMUST00000196220 Lce1gQ9D195 139 aa4.46□□□□□ -1.69
Pdlim5-208ENSMUST00000196220 Krtap4-1Q3UUY3 169 aa4.41□□□□□ -1.7
Pdlim5-208ENSMUST00000196220 Krtap4-2B1AQ85 167 aa4.38□□□□□ -1.71
Pdlim5-208ENSMUST00000196220 Lce1eQ9D139 143 aa4.38□□□□□ -1.71
Pdlim5-208ENSMUST00000196220 Krtap19-4Q925H7 84 aa4.35□□□□□ -1.71
Pdlim5-208ENSMUST00000196220 Gm11596B1AQB0 205 aa4.34□□□□□ -1.71
Pdlim5-208ENSMUST00000196220 Lce1bQ9D149 137 aa4.29□□□□□ -1.72
Pdlim5-208ENSMUST00000196220 Gm11564A2A4L9 201 aa4.27□□□□□ -1.73
Pdlim5-208ENSMUST00000196220 Gm11563B1AQ90 168 aa4.27□□□□□ -1.73
Pdlim5-208ENSMUST00000196220 Gm11595B1AQA7 289 aa4.27□□□□□ -1.73
Pdlim5-208ENSMUST00000196220 Krtap4-8B1AQA8 209 aa4.27□□□□□ -1.73
Pdlim5-208ENSMUST00000196220 Lce3bQ9CQM7 98 aa4.24□□□□□ -1.73
Pdlim5-208ENSMUST00000196220 Lce1cQ9D1C5 147 aa4.21□□□□□ -1.74
Pdlim5-208ENSMUST00000196220 Mt4P47945 62 aa4.2□□□□□ -1.74
Pdlim5-208ENSMUST00000196220 Syne2Q6ZWQ0 6874 aaKnown RBP4.2□□□□□ -1.74
Pdlim5-208ENSMUST00000196220 Syne1Q6ZWR6 8799 aa4.19□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms