RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Dnah8Q91XQ0 4731 aa5.19□□□□□ -1.58
Usp4-209ENSMUST00000194959 Gm10318A0A1W2P728 225 aa5.16□□□□□ -1.58
Usp4-209ENSMUST00000194959 Gm9955Q8CEJ8 102 aa5.13□□□□□ -1.59
Usp4-209ENSMUST00000194959 Dnhd1D3Z2X2 4750 aa5.12□□□□□ -1.59
Usp4-209ENSMUST00000194959 Gm12216A0A1W2P827 62 aa5.08□□□□□ -1.6
Usp4-209ENSMUST00000194959 Crct1Q6PAI5 102 aa5.07□□□□□ -1.6
Usp4-209ENSMUST00000194959 Pla2g10Q9QXX3 151 aa5.01□□□□□ -1.61
Usp4-209ENSMUST00000194959 Krtap3-1A2A591 98 aa5□□□□□ -1.61
Usp4-209ENSMUST00000194959 Gm17416Q30KP4 66 aa4.99□□□□□ -1.61
Usp4-209ENSMUST00000194959 Herc1E9PZP8 4859 aa4.97□□□□□ -1.61
Usp4-209ENSMUST00000194959 Birc6O88738 4882 aa4.95□□□□□ -1.62
Usp4-209ENSMUST00000194959 Krtap13-1Q8K198 168 aa4.95□□□□□ -1.62
Usp4-209ENSMUST00000194959 2210017I01RikA0A0A6YVV1 95 aa4.94□□□□□ -1.62
Usp4-209ENSMUST00000194959 BC029722A0A0N4SW31 51 aa4.93□□□□□ -1.62
Usp4-209ENSMUST00000194959 Sec61bQ9CQS8 96 aaKnown RBP4.93□□□□□ -1.62
Usp4-209ENSMUST00000194959 Romo1P60603 79 aa4.91□□□□□ -1.62
Usp4-209ENSMUST00000194959 Spink7Q6IE32 76 aa4.91□□□□□ -1.62
Usp4-209ENSMUST00000194959 Gm21887J3QQ04 176 aa4.9□□□□□ -1.62
Usp4-209ENSMUST00000194959 Gm19426M0QWC7 77 aa4.85□□□□□ -1.63
Usp4-209ENSMUST00000194959 Ubr4A2AN08 5180 aa4.85□□□□□ -1.63
Usp4-209ENSMUST00000194959 Fam229aB2KGE5 128 aa4.84□□□□□ -1.64
Usp4-209ENSMUST00000194959 B930094E09RikQ8C4T2 136 aa4.8□□□□□ -1.64
Usp4-209ENSMUST00000194959 Fat4Q2PZL6 4981 aa4.76□□□□□ -1.65
Usp4-209ENSMUST00000194959 Gm19402J3QJV4 266 aa4.73□□□□□ -1.65
Usp4-209ENSMUST00000194959 ZanO88799 5376 aa4.71□□□□□ -1.66
Usp4-209ENSMUST00000194959 Krtap16-3Q8C1I6 86 aa4.71□□□□□ -1.66
Usp4-209ENSMUST00000194959 Mp68P56379 58 aa4.68□□□□□ -1.66
Usp4-209ENSMUST00000194959 Krtap1-5A2A590 122 aa4.66□□□□□ -1.66
Usp4-209ENSMUST00000194959 Ush2AQ2QI47 5193 aa4.64□□□□□ -1.67
Usp4-209ENSMUST00000194959 Krtap19-3Q925H6 87 aa4.61□□□□□ -1.67
Usp4-209ENSMUST00000194959 Krtap19-1Q925H2 87 aa4.59□□□□□ -1.67
Usp4-209ENSMUST00000194959 4932415D10RikA0A1W2P6U8 4986 aa4.59□□□□□ -1.67
Usp4-209ENSMUST00000194959 LorP18165 486 aa4.58□□□□□ -1.68
Usp4-209ENSMUST00000194959 Camk2n1Q6QWF9 78 aa4.56□□□□□ -1.68
Usp4-209ENSMUST00000194959 Rnf213E9Q555 5152 aaKnown RBP4.56□□□□□ -1.68
Usp4-209ENSMUST00000194959 Lce1mQ9CR91 182 aa4.55□□□□□ -1.68
Usp4-209ENSMUST00000194959 Hmcn2A2AJ76 5100 aa4.54□□□□□ -1.68
Usp4-209ENSMUST00000194959 Gm18596A0A1W2P860 280 aa4.52□□□□□ -1.69
Usp4-209ENSMUST00000194959 Sprr2a3Q4KL71 83 aa4.49□□□□□ -1.69
Usp4-209ENSMUST00000194959 Sprr2a1Q9CQK8 83 aa4.49□□□□□ -1.69
Usp4-209ENSMUST00000194959 Gm17402F6Z0L5 76 aa4.48□□□□□ -1.69
Usp4-209ENSMUST00000194959 Krtap1-4Q3V2D6 188 aa4.47□□□□□ -1.69
Usp4-209ENSMUST00000194959 Krtap1-3A2A588 173 aa4.46□□□□□ -1.7
Usp4-209ENSMUST00000194959 Gm20538F6Z9R1 75 aa4.46□□□□□ -1.7
Usp4-209ENSMUST00000194959 Gm19668J3QMD1 248 aa4.45□□□□□ -1.7
Usp4-209ENSMUST00000194959 Krtap7-1Q9D3I6 87 aa4.44□□□□□ -1.7
Usp4-209ENSMUST00000194959 Lce1jD3YUU5 139 aa4.42□□□□□ -1.7
Usp4-209ENSMUST00000194959 Ndufaf8A2AMZ4 74 aa4.4□□□□□ -1.7
Usp4-209ENSMUST00000194959 Krtap17-1A2A5X6 109 aa4.36□□□□□ -1.71
Usp4-209ENSMUST00000194959 Krtap12-1Q9Z287 130 aa4.32□□□□□ -1.72
Usp4-209ENSMUST00000194959 Krtap19-9aF8WH65 55 aa4.27□□□□□ -1.73
Usp4-209ENSMUST00000194959 Gm40193A0A1B0GT39 78 aa4.24□□□□□ -1.73
Usp4-209ENSMUST00000194959 Gm9789Q8BIG3 52 aa4.24□□□□□ -1.73
Usp4-209ENSMUST00000194959 Prm2P07978 107 aa4.24□□□□□ -1.73
Usp4-209ENSMUST00000194959 Gm7735D3YX18 52 aa4.19□□□□□ -1.74
Usp4-209ENSMUST00000194959 Krtap9-5A2A5X3 358 aa4.16□□□□□ -1.74
Usp4-209ENSMUST00000194959 Prm1P02319 51 aa4.15□□□□□ -1.75
Usp4-209ENSMUST00000194959 Tnp1P10856 55 aa4.14□□□□□ -1.75
Usp4-209ENSMUST00000194959 Mdn1A2ANY6 5589 aaKnown RBP4.11□□□□□ -1.75
Usp4-209ENSMUST00000194959 Krtap19-2Q925I0 141 aa4.1□□□□□ -1.75
Usp4-209ENSMUST00000194959 Lce1iQ9D6P5 149 aa4.09□□□□□ -1.75
Usp4-209ENSMUST00000194959 Lce1a2Q9D1K4 149 aa4.07□□□□□ -1.76
Usp4-209ENSMUST00000194959 SspoQ8CG65 4998 aa4.03□□□□□ -1.77
Usp4-209ENSMUST00000194959 Krtap19-9bQ99NG9 58 aa3.96□□□□□ -1.77
Usp4-209ENSMUST00000194959 Krtap9-3Q3V2C1 136 aa3.96□□□□□ -1.78
Usp4-209ENSMUST00000194959 Gm10061D3Z714 54 aa3.94□□□□□ -1.78
Usp4-209ENSMUST00000194959 Krtap8-1O08633 61 aa3.94□□□□□ -1.78
Usp4-209ENSMUST00000194959 Gm9112A2AI92 75 aa3.92□□□□□ -1.78
Usp4-209ENSMUST00000194959 Mt2P02798 61 aa3.89□□□□□ -1.79
Usp4-209ENSMUST00000194959 Gm6358A0A087WPH4 74 aa3.86□□□□□ -1.79
Usp4-209ENSMUST00000194959 Lce1hQ9D6R3 140 aa3.85□□□□□ -1.79
Usp4-209ENSMUST00000194959 Muc5bE9Q5I3 4800 aa3.81□□□□□ -1.8
Usp4-209ENSMUST00000194959 Gm11569B1AQB1 180 aa3.75□□□□□ -1.81
Usp4-209ENSMUST00000194959 2310046K23RikA0A0A6YVW6 87 aa3.69□□□□□ -1.82
Usp4-209ENSMUST00000194959 Gm10272F7CZ33 110 aa3.64□□□□□ -1.83
Usp4-209ENSMUST00000194959 Krtap22-2J3QNX6 67 aa3.64□□□□□ -1.83
Usp4-209ENSMUST00000194959 Fsip2A2ARZ3 6995 aa3.63□□□□□ -1.83
Usp4-209ENSMUST00000194959 Lce1dQ9D731 133 aa3.57□□□□□ -1.84
Usp4-209ENSMUST00000194959 Krtap4-6Q3V4B7 195 aa3.52□□□□□ -1.85
Usp4-209ENSMUST00000194959 Syne1Q6ZWR6 8799 aa3.49□□□□□ -1.85
Usp4-209ENSMUST00000194959 Lce1eQ9D139 143 aa3.43□□□□□ -1.86
Usp4-209ENSMUST00000194959 Syne2Q6ZWQ0 6874 aaKnown RBP3.42□□□□□ -1.86
Usp4-209ENSMUST00000194959 Gm38119A0A0A6YX29 146 aa3.4□□□□□ -1.87
Usp4-209ENSMUST00000194959 Krtap4-1Q3UUY3 169 aa3.4□□□□□ -1.87
Usp4-209ENSMUST00000194959 Lce1cQ9D1C5 147 aa3.37□□□□□ -1.87
Usp4-209ENSMUST00000194959 4933428G20RikQ9D3X4 101 aa3.37□□□□□ -1.87
Usp4-209ENSMUST00000194959 Mt4P47945 62 aa3.35□□□□□ -1.87
Usp4-209ENSMUST00000194959 Krtap4-2B1AQ85 167 aa3.35□□□□□ -1.87
Usp4-209ENSMUST00000194959 Sprr2gO70558 76 aa3.34□□□□□ -1.87
Usp4-209ENSMUST00000194959 Gm11938Q9D3H4 131 aa3.32□□□□□ -1.88
Usp4-209ENSMUST00000194959 Lce1gQ9D195 139 aa3.32□□□□□ -1.88
Usp4-209ENSMUST00000194959 Lce3bQ9CQM7 98 aa3.31□□□□□ -1.88
Usp4-209ENSMUST00000194959 Gm10100J3QK64 120 aa3.3□□□□□ -1.88
Usp4-209ENSMUST00000194959 Gm11596B1AQB0 205 aa3.26□□□□□ -1.89
Usp4-209ENSMUST00000194959 Gm11564A2A4L9 201 aa3.26□□□□□ -1.89
Usp4-209ENSMUST00000194959 Gm11563B1AQ90 168 aa3.26□□□□□ -1.89
Usp4-209ENSMUST00000194959 Gm11595B1AQA7 289 aa3.26□□□□□ -1.89
Usp4-209ENSMUST00000194959 Krtap4-8B1AQA8 209 aa3.26□□□□□ -1.89
Usp4-209ENSMUST00000194959 Krtap4-9B1AQA9 244 aa3.25□□□□□ -1.89
Usp4-209ENSMUST00000194959 Sprr2kO70562 68 aa3.25□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms